Result of FASTA (omim) for
pF1KSDA1950
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1950, 498 aa
1>>>pF1KSDA1950 498 - 498 aa - 498 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0506+/-0.000302; mu= 15.6856+/- 0.019
mean_var=101.8416+/-20.295, 0's: 0 Z-trim(119.4): 41 B-trim: 116 in 1/57
Lambda= 0.127090
statistics sampled from 33263 (33304) to 33263 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.39), width: 16
Scan time: 10.860
The best scores are: opt bits E(85289)
NP_597720 (OMIM: 615168) archaemetzincin-1 isoform ( 498) 3447 642.4 9e-184
XP_011513452 (OMIM: 615168) PREDICTED: archaemetzi ( 498) 3447 642.4 9e-184
NP_001308695 (OMIM: 615168) archaemetzincin-1 isof ( 330) 2204 414.3 2.7e-115
XP_016867265 (OMIM: 615168) PREDICTED: archaemetzi ( 273) 1773 335.2 1.4e-91
XP_016867264 (OMIM: 615168) PREDICTED: archaemetzi ( 298) 1389 264.8 2.4e-70
NP_001271284 (OMIM: 615168) archaemetzincin-1 isof ( 297) 1373 261.9 1.8e-69
XP_011513453 (OMIM: 615168) PREDICTED: archaemetzi ( 308) 1373 261.9 1.9e-69
XP_016867263 (OMIM: 615168) PREDICTED: archaemetzi ( 308) 1373 261.9 1.9e-69
NP_001333407 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333403 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001028741 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333408 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001028742 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333405 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333400 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333406 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333401 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333402 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_057711 (OMIM: 615169) archaemetzincin-2 isoform ( 360) 728 143.7 8.4e-34
NP_001275985 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001333404 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001028743 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001275983 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
NP_001028744 (OMIM: 615169) archaemetzincin-2 isof ( 360) 728 143.7 8.4e-34
XP_005257489 (OMIM: 615169) PREDICTED: archaemetzi ( 424) 728 143.8 9.5e-34
NP_001333414 (OMIM: 615169) archaemetzincin-2 isof ( 304) 665 132.1 2.2e-30
NP_001333411 (OMIM: 615169) archaemetzincin-2 isof ( 326) 568 114.3 5.2e-25
NP_001333410 (OMIM: 615169) archaemetzincin-2 isof ( 326) 568 114.3 5.2e-25
XP_006722003 (OMIM: 615169) PREDICTED: archaemetzi ( 326) 568 114.3 5.2e-25
NP_001333412 (OMIM: 615169) archaemetzincin-2 isof ( 326) 568 114.3 5.2e-25
NP_001333413 (OMIM: 615169) archaemetzincin-2 isof ( 326) 568 114.3 5.2e-25
NP_001028746 (OMIM: 615169) archaemetzincin-2 isof ( 302) 475 97.3 6.7e-20
NP_001333409 (OMIM: 615169) archaemetzincin-2 isof ( 302) 475 97.3 6.7e-20
>>NP_597720 (OMIM: 615168) archaemetzincin-1 isoform 1 [ (498 aa)
initn: 3447 init1: 3447 opt: 3447 Z-score: 3420.2 bits: 642.4 E(85289): 9e-184
Smith-Waterman score: 3447; 100.0% identity (100.0% similar) in 498 aa overlap (1-498:1-498)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_597 EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA
430 440 450 460 470 480
490
pF1KSD RKLARAESAPRPWDGEES
::::::::::::::::::
NP_597 RKLARAESAPRPWDGEES
490
>>XP_011513452 (OMIM: 615168) PREDICTED: archaemetzincin (498 aa)
initn: 3447 init1: 3447 opt: 3447 Z-score: 3420.2 bits: 642.4 E(85289): 9e-184
Smith-Waterman score: 3447; 100.0% identity (100.0% similar) in 498 aa overlap (1-498:1-498)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTSVSEPLTPDAGSHTFASGPEEGLSYLAASEAPLPPGGPAEAIKEHERWLAMCIQALQR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EVAEEDLVQVDRAVDALDRWEMFTGQLPATRQDPPSSRDSVGLRKVLGDKFSSLRRKLSA
430 440 450 460 470 480
490
pF1KSD RKLARAESAPRPWDGEES
::::::::::::::::::
XP_011 RKLARAESAPRPWDGEES
490
>>NP_001308695 (OMIM: 615168) archaemetzincin-1 isoform (330 aa)
initn: 2198 init1: 2198 opt: 2204 Z-score: 2191.0 bits: 414.3 E(85289): 2.7e-115
Smith-Waterman score: 2204; 97.8% identity (98.8% similar) in 325 aa overlap (1-325:1-323)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDSEP
:::::::::::::::: .:.. :
NP_001 RKLQHVLGFRLIERYQ--VSWVNPVASATAGN
310 320 330
>>XP_016867265 (OMIM: 615168) PREDICTED: archaemetzincin (273 aa)
initn: 1773 init1: 1773 opt: 1773 Z-score: 1765.1 bits: 335.2 E(85289): 1.4e-91
Smith-Waterman score: 1773; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPLQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPICL
::::::::::::::::::
XP_016 RGWALCFSALGMVQCCKVGGGSGAGKRGQEGAV
250 260 270
>>XP_016867264 (OMIM: 615168) PREDICTED: archaemetzincin (298 aa)
initn: 1361 init1: 1361 opt: 1389 Z-score: 1384.0 bits: 264.8 E(85289): 2.4e-70
Smith-Waterman score: 1389; 85.1% identity (89.6% similar) in 249 aa overlap (1-245:1-249)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230
pF1KSD SDLYPHEAWSFTFSKFLPGH-EVG---VCSFARFSGEFPKSGPSAPDLALVEAAADGPEA
:::::::::::::::::::: : : .: . .. : ::.: :..: . .
XP_016 SDLYPHEAWSFTFSKFLPGHGEPGPQQLCVGGSLAWGCGLRGCRAPSLLLLQAPSWWKST
190 200 210 220 230 240
240 250 260 270 280 290
pF1KSD PLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLC
:.. : :
XP_016 PVHGNRWPLPAPPEEWHRGCSSAVASAPGPNFMWAGQGLPGLVCLWAMASLHESMRWV
250 260 270 280 290
>>NP_001271284 (OMIM: 615168) archaemetzincin-1 isoform (297 aa)
initn: 1406 init1: 1361 opt: 1373 Z-score: 1368.2 bits: 261.9 E(85289): 1.8e-69
Smith-Waterman score: 1381; 73.3% identity (78.7% similar) in 315 aa overlap (1-307:1-297)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230
pF1KSD SDLYPHEAWSFTFSKFLPGH-EVGVCSFARFSGEFP-----KSGPSAPDLALVEAAADGP
:::::::::::::::::::: .: ::.: ..: . : . ::: ::
NP_001 SDLYPHEAWSFTFSKFLPGHGHVPRALPPSGPGELPLAPLPHAGCAQPGRG--PAAAPGP
190 200 210 220 230
240 250 260 270 280 290
pF1KSD EAPLQDRGWALC--FSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRP
. : ... : : :.: : : :: . :. . ::.:.
NP_001 LSHLPEEA-AACPGFQAHREVP-------ETLHLDSGGGGDVAQPGGGGAVSVGGH----
240 250 260 270 280
300 310 320 330 340 350
pF1KSD LDLCPICLRKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGM
: : :.: :::
NP_001 ----PACQRRLGHVL
290
>>XP_011513453 (OMIM: 615168) PREDICTED: archaemetzincin (308 aa)
initn: 1406 init1: 1361 opt: 1373 Z-score: 1368.0 bits: 261.9 E(85289): 1.9e-69
Smith-Waterman score: 1373; 84.9% identity (88.9% similar) in 252 aa overlap (1-246:1-249)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230
pF1KSD SDLYPHEAWSFTFSKFLPGH-EVGVCSFARFSGEFP-----KSGPSAPDLALVEAAADGP
:::::::::::::::::::: .: ::.: ..: . : . ::: ::
XP_011 SDLYPHEAWSFTFSKFLPGHGHVPRALPPSGPGELPLAPLPHAGCAQPGRG--PAAAPGP
190 200 210 220 230
240 250 260 270 280 290
pF1KSD EAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLD
. : ... : :
XP_011 LSHLPEEA-AACPGFQAHREVPGELGEPSSFSHSWELKQHLKSLSFSQREPADPEGNTET
240 250 260 270 280 290
>>XP_016867263 (OMIM: 615168) PREDICTED: archaemetzincin (308 aa)
initn: 1406 init1: 1361 opt: 1373 Z-score: 1368.0 bits: 261.9 E(85289): 1.9e-69
Smith-Waterman score: 1373; 84.9% identity (88.9% similar) in 252 aa overlap (1-246:1-249)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPIDLSEEPVGSSLLHQLCSCT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGLTL
130 140 150 160 170 180
190 200 210 220 230
pF1KSD SDLYPHEAWSFTFSKFLPGH-EVGVCSFARFSGEFP-----KSGPSAPDLALVEAAADGP
:::::::::::::::::::: .: ::.: ..: . : . ::: ::
XP_016 SDLYPHEAWSFTFSKFLPGHGHVPRALPPSGPGELPLAPLPHAGCAQPGRG--PAAAPGP
190 200 210 220 230
240 250 260 270 280 290
pF1KSD EAPLQDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLD
. : ... : :
XP_016 LSHLPEEA-AACPGFQAHREVPGELGEPSSFSHSWELKQHLKSLSFSQREPADPEGNTET
240 250 260 270 280 290
>>NP_001333407 (OMIM: 615169) archaemetzincin-2 isoform (360 aa)
initn: 654 init1: 300 opt: 728 Z-score: 727.9 bits: 143.7 E(85289): 8.4e-34
Smith-Waterman score: 728; 36.9% identity (68.6% similar) in 309 aa overlap (15-321:9-314)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
..:: ::.: . .: . : .. .:. .. ::..: :: . .
NP_001 MQIIRHSEQTLKTALISKNPVLVSQY-EKLNAGEQRLMNEAFQPASDLFGPITL
10 20 30 40 50
70 80 90 100 110
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPI-DLSEEPVGSS-LLHQLCS
.. ::. :.::::.::. : .. .. : .. ::.: : .:.. . : .. : .
NP_001 HSPSDWITSHPEAPQDFEQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD CTEAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGL
.:.: ::::: : : .. ::: : .... ::.:. ::.:::..:: ::.::.:.
NP_001 YCKAYFYGLRVKLLEPVPVSVTRCSFRVNENTHNLQIHAGDILKFLKKKKPEDAFCVVGI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD TLSDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPL
:. ::::...:.:.:.. ::. ::::....: . .. : ..... . .
NP_001 TMIDLYPRDSWNFVFGQASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD QDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPI
: . .... ... ::. ::. :..:: .:.:: :::::. :.:: ::::.::::
NP_001 FDNYYIPEITSVLLLRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD CLRKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDS
::.::: ..:: ..:::. : :
NP_001 CLHKLQCAVGFSIVERYKALVRWIDDESSDTPGATPEHSHEDNGNLPKPVEAFKEWKEWI
300 310 320 330 340 350
>>NP_001333403 (OMIM: 615169) archaemetzincin-2 isoform (360 aa)
initn: 654 init1: 300 opt: 728 Z-score: 727.9 bits: 143.7 E(85289): 8.4e-34
Smith-Waterman score: 728; 36.9% identity (68.6% similar) in 309 aa overlap (15-321:9-314)
10 20 30 40 50 60
pF1KSD MLQCRPAQEFSFGPRALKDALVSTDAALQQLYVSAFSPAERLFLAEAYNPQRTLFCTLLI
..:: ::.: . .: . : .. .:. .. ::..: :: . .
NP_001 MQIIRHSEQTLKTALISKNPVLVSQY-EKLNAGEQRLMNEAFQPASDLFGPITL
10 20 30 40 50
70 80 90 100 110
pF1KSD RTGFDWLLSRPEAPEDFQTFHASLQHRKPRLARKHIYLQPI-DLSEEPVGSS-LLHQLCS
.. ::. :.::::.::. : .. .. : .. ::.: : .:.. . : .. : .
NP_001 HSPSDWITSHPEAPQDFEQFFSDPYRKTPSPNKRSIYIQSIGSLGNTRIISEEYIKWLTG
60 70 80 90 100 110
120 130 140 150 160 170
pF1KSD CTEAFFLGLRVKCLPSVAAASIRCSSRPSRDSDRLQLHTDGILSFLKNNKPGDALCVLGL
.:.: ::::: : : .. ::: : .... ::.:. ::.:::..:: ::.::.:.
NP_001 YCKAYFYGLRVKLLEPVPVSVTRCSFRVNENTHNLQIHAGDILKFLKKKKPEDAFCVVGI
120 130 140 150 160 170
180 190 200 210 220 230
pF1KSD TLSDLYPHEAWSFTFSKFLPGHEVGVCSFARFSGEFPKSGPSAPDLALVEAAADGPEAPL
:. ::::...:.:.:.. ::. ::::....: . .. : ..... . .
NP_001 TMIDLYPRDSWNFVFGQASLTDGVGIFSFARYGSDFYSMHYKGKVKKLKKTSSS--DYSI
180 190 200 210 220 230
240 250 260 270 280 290
pF1KSD QDRGWALCFSALGMVQCCKVTCHELCHLLGLGNCRWLRCLMQGALSLDEALRRPLDLCPI
: . .... ... ::. ::. :..:: .:.:: :::::. :.:: ::::.::::
NP_001 FDNYYIPEITSVLLLRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHLEEADRRPLNLCPI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KSD CLRKLQHVLGFRLIERYQRLYTWTQAVVGTWPSQEAGEPSVWEDTPPASADSGMCCESDS
::.::: ..:: ..:::. : :
NP_001 CLHKLQCAVGFSIVERYKALVRWIDDESSDTPGATPEHSHEDNGNLPKPVEAFKEWKEWI
300 310 320 330 340 350
498 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 19:13:46 2016 done: Thu Nov 3 19:13:48 2016
Total Scan time: 10.860 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]