Result of FASTA (ccds) for
pF1KSDA2008
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA2008, 792 aa
1>>>pF1KSDA2008 792 - 792 aa - 792 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5999+/-0.000865; mu= 19.2633+/- 0.052
mean_var=79.4814+/-16.135, 0's: 0 Z-trim(107.9): 16 B-trim: 478 in 1/50
Lambda= 0.143860
statistics sampled from 9863 (9868) to 9863 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.303), width: 16
Scan time: 4.120
The best scores are: opt bits E(32554)
CCDS59299.1 MGAT5B gene_id:146664|Hs108|chr17 ( 792) 5521 1155.9 0
CCDS11751.1 MGAT5B gene_id:146664|Hs108|chr17 ( 790) 5495 1150.5 0
CCDS45788.1 MGAT5B gene_id:146664|Hs108|chr17 ( 801) 5354 1121.3 0
CCDS2171.1 MGAT5 gene_id:4249|Hs108|chr2 ( 741) 1784 380.3 6.3e-105
>>CCDS59299.1 MGAT5B gene_id:146664|Hs108|chr17 (792 aa)
initn: 5521 init1: 5521 opt: 5521 Z-score: 6188.5 bits: 1155.9 E(32554): 0
Smith-Waterman score: 5521; 100.0% identity (100.0% similar) in 792 aa overlap (1-792:1-792)
10 20 30 40 50 60
pF1KSD MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD LDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD FSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD LNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKLQGKEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 LNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKLQGKEK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD FLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD APLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 APLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSP
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD FVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 FVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLN
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD SQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDF
730 740 750 760 770 780
790
pF1KSD RKGQVALCQGCL
::::::::::::
CCDS59 RKGQVALCQGCL
790
>>CCDS11751.1 MGAT5B gene_id:146664|Hs108|chr17 (790 aa)
initn: 3243 init1: 3243 opt: 5495 Z-score: 6159.4 bits: 1150.5 E(32554): 0
Smith-Waterman score: 5495; 99.7% identity (99.7% similar) in 792 aa overlap (1-792:1-790)
10 20 30 40 50 60
pF1KSD MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCSGKVEWMRARWT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKVQAVFRSNLSHL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD LDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 LDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVHIGFLTEESGDV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD FSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPGRGSCPLTMPLP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD FDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD LNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWKLQGKEK
:::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
CCDS11 LNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKEASIWK--GKEK
430 440 450 460 470
490 500 510 520 530 540
pF1KSD FLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKLFIGFGFPYEGP
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD APLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 APLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFIGKPHVWTVDYN
540 550 560 570 580 590
610 620 630 640 650 660
pF1KSD NSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 NSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDPALPEAHAPQSP
600 610 620 630 640 650
670 680 690 700 710 720
pF1KSD FVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGLICEPSFFPFLN
660 670 680 690 700 710
730 740 750 760 770 780
pF1KSD SQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNTKYRRLCPCRDF
720 730 740 750 760 770
790
pF1KSD RKGQVALCQGCL
::::::::::::
CCDS11 RKGQVALCQGCL
780 790
>>CCDS45788.1 MGAT5B gene_id:146664|Hs108|chr17 (801 aa)
initn: 3093 init1: 3093 opt: 5354 Z-score: 6001.2 bits: 1121.3 E(32554): 0
Smith-Waterman score: 5354; 97.8% identity (98.6% similar) in 790 aa overlap (4-792:14-801)
10 20 30 40
pF1KSD MITVNPDGKIMVRRCLVTLRPFR-LFVLGIGFFTLCFLMTSLGGQFSARR
:. .: . . :. : :.: ::::::::::::::::::::::::::
CCDS45 MHSFVKHLCSRYVVERQGTMALPALLTRLLPLRRLFVLGIGFFTLCFLMTSLGGQFSARR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KSD LGDSPFTIRTEVMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LGDSPFTIRTEVMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPAD
70 80 90 100 110 120
110 120 130 140 150 160
pF1KSD RMPPGAGLMERIQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RMPPGAGLMERIQAIAQNVSDIAVKVDQILRHSLLLHSKVSEGRRDQCEAPSDPKFPDCS
130 140 150 160 170 180
170 180 190 200 210 220
pF1KSD GKVEWMRARWTSDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GKVEWMRARWTSDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQRAPKPLPKV
190 200 210 220 230 240
230 240 250 260 270 280
pF1KSD QAVFRSNLSHLLDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QAVFRSNLSHLLDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQRDQKQILVH
250 260 270 280 290 300
290 300 310 320 330 340
pF1KSD IGFLTEESGDVFSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IGFLTEESGDVFSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQSNLGVPPG
310 320 330 340 350 360
350 360 370 380 390 400
pF1KSD RGSCPLTMPLPFDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RGSCPLTMPLPFDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPAYNHEEYATL
370 380 390 400 410 420
410 420 430 440 450 460
pF1KSD HGYRTNWGYWNLNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 HGYRTNWGYWNLNPKQFMTMFPHTPDNSFMGFVSEELNETEKRLIKGGKASNMAVVYGKE
430 440 450 460 470 480
470 480 490 500 510 520
pF1KSD ASIWKLQGKEKFLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKL
::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ASIWK--GKEKFLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPEFQQLLRKAKL
490 500 510 520 530
530 540 550 560 570 580
pF1KSD FIGFGFPYEGPAPLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FIGFGFPYEGPAPLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVFSQHPYAENFI
540 550 560 570 580 590
590 600 610 620 630 640
pF1KSD GKPHVWTVDYNNSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GKPHVWTVDYNNSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCRAPDP
600 610 620 630 640 650
650 660 670 680 690 700
pF1KSD ALPEAHAPQSPFVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ALPEAHAPQSPFVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRACTDTCLDHGL
660 670 680 690 700 710
710 720 730 740 750 760
pF1KSD ICEPSFFPFLNSQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ICEPSFFPFLNSQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPLLFSCAGSNT
720 730 740 750 760 770
770 780 790
pF1KSD KYRRLCPCRDFRKGQVALCQGCL
:::::::::::::::::::::::
CCDS45 KYRRLCPCRDFRKGQVALCQGCL
780 790 800
>>CCDS2171.1 MGAT5 gene_id:4249|Hs108|chr2 (741 aa)
initn: 2010 init1: 698 opt: 1784 Z-score: 1997.3 bits: 380.3 E(32554): 6.3e-105
Smith-Waterman score: 2135; 42.9% identity (67.8% similar) in 798 aa overlap (16-792:1-741)
10 20 30 40 50 60
pF1KSD MITVNPDGKIMVRRCLVTLRPFRLFVLGIGFFTLCFLMTSLGGQFSARRLGDSPFTIRTE
.. . :..: .::: . : : .. : :::. .
CCDS21 MALFTPWKLSSQKLGFFLVTF-----GFIWGMMLL---HFTIQQR
10 20 30
70 80 90 100 110 120
pF1KSD VMGGPESRGVLRKMSDLLELMVKRMDALARLENSSELHRAGGDLHFPADRMPPGAGLMER
.. ::: ..::.. .:.: . . :::. :: . . . . : : :..
CCDS21 TQ--PESSSMLREQ--ILDLSKRYIKALAE-ENRNVVDGPYAGVMTAYDLKKTLAVLLDN
40 50 60 70 80 90
130 140 150 160
pF1KSD IQAIAQNVSDIAVKVDQILRH--------------SLLLHSKVS-----EGRRDQCEAPS
: : .. . :::... . ::. :.. .: ...: :
CCDS21 I---LQRIGKLESKVDNLVVNGTGTNSTNSTTAVPSLVALEKINVADIINGAQEKCVLPP
100 110 120 130 140
170 180 190 200 210 220
pF1KSD DPKFPDCSGKVEWMRARWTSDPCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNQTAAQR
.: : ::..::. : :::::: .::::. :::.::::::: .:: :::: .. ..
CCDS21 MDGYPHCEGKIKWMKDMWRSDPCYADYGVDGSTCSFFIYLSEVENWCPHLPWRAKNPYEE
150 160 170 180 190 200
230 240 250 260 270 280
pF1KSD APKPLPKVQAVFRSNLSHLLDLMGSGKESLIFMKKRTKRLTAQWALAAQRLAQKLGATQR
: . . : .:.... : ..: . .: . .:. : .:.. : : . ::.: . .:
CCDS21 ADH---NSLAEIRTDFNILYSMM-KKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKR
210 220 230 240 250 260
290 300 310 320 330 340
pF1KSD DQKQILVHIGFLTEESGDVFSPRVLKGGPLGEMVQWADILTALYVLGHGLRVTVSLKELQ
.:..:::.:.::.::: .. ...::::::.:::.:..:.::.::: .:...:: ::.
CCDS21 KRKKVLVHLGLLTKESGFKIAETAFSGGPLGELVQWSDLITSLYLLGHDIRISASLAELK
270 280 290 300 310 320
350 360 370 380 390 400
pF1KSD SNLG-VPPGRGSCPLTMPLPFDLIYTDYHGLQQMKRHMGLSFKKYRCRIRVIDTFGTEPA
. : .:..:: . .::: : :: :.:. .: :. .:.: .::.:.:::::
CCDS21 EIMKKVVGNRSGCPTVGDRIVELIYIDIVGLAQFKKTLGPSWVHYQCMLRVLDSFGTEPE
330 340 350 360 370 380
410 420 430 440 450
pF1KSD YNHEEYATLHGYRTNWGYWNLNPKQFMTMFPHTPDNSFMGFVSEE-LNETEKRLIKGGKA
.:: .:: .:..: :: :::::.::.:::::::::::.::: :. :: .. . :. :
CCDS21 FNHANYAQSKGHKTPWGKWNLNPQQFYTMFPHTPDNSFLGFVVEQHLNSSDIHHINEIKR
390 400 410 420 430 440
460 470 480 490 500 510
pF1KSD SNMAVVYGKEASIWKLQGKEKFLGILNKYMEIHGTVYYESQRPPEVPAFVKNHGLLPQPE
.:...:::: :.:: .:. .: :.. :::.:.::: : . ..:..:::::.: .
CCDS21 QNQSLVYGKVDSFWK--NKKIYLDIIHTYMEVHATVYGSSTK--NIPSYVKNHGILSGRD
450 460 470 480 490 500
520 530 540 550 560 570
pF1KSD FQQLLRKAKLFIGFGFPYEGPAPLEAIANGCIFLQSRFSPPHSSLNHEFFRGKPTSREVF
.: :::..:::.:.::::::::::::::::: ::. .:.::.:: : .:: :::: ::.
CCDS21 LQFLLRETKLFVGLGFPYEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTLRELT
510 520 530 540 550 560
580 590 600 610 620 630
pF1KSD SQHPYAENFIGKPHVWTVDYNNSEEFEAAIKAIMRTQVDPYLPYEYTCEGMLERIHAYIQ
::::::: :::.::::::: ::.:: : :.:::. ...::.:::.::::::.::.:.:.
CCDS21 SQHPYAEVFIGRPHVWTVDLNNQEEVEDAVKAILNQKIEPYMPYEFTCEGMLQRINAFIE
570 580 590 600 610 620
640 650 660 670 680 690
pF1KSD HQDFCRAPDPALPEAHAPQSPFVLAPNATHLEWARNTSLAPGAWPPAHALRAWLAVPGRA
.::::.. :. ::: ::.. :: ::..
CCDS21 KQDFCHGQ--------------VM-------------------WPPLSALQVKLAEPGQS
630 640
700 710 720 730 740 750
pF1KSD CTDTCLDHGLICEPSFFPFLNSQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEP
: ..: . :::::::: ::.. .:: .: :.:.: . : :.: ...: .: .
CCDS21 CKQVCQESQLICEPSFFQHLNKDKDMLKYKVTCQSSELAKDILVPSFDPKNKHCVFQGDL
650 660 670 680 690 700
760 770 780 790
pF1KSD LLFSCAGSNTKYRRLCPCRDFRKGQVALCQGCL
:::::::.. ...:.:::::: :::::::. ::
CCDS21 LLFSCAGAHPRHQRVCPCRDFIKGQVALCKDCL
710 720 730 740
792 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 19:14:55 2016 done: Thu Nov 3 19:14:56 2016
Total Scan time: 4.120 Total Display time: 0.110
Function used was FASTA [36.3.4 Apr, 2011]