(Circular) (Six-base) MAPSORT of: pF1KSDB0002.seq Check: 5897 from: 1 to: 6865 pF1KSDB0002 6865 bp With 182 enzymes: SgfI * June 20, 2008 10:36 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 831 831 Size: 6865 AccI GT'mk_AC Cuts at: 3901 3901 Size: 6865 Acc65I G'GTAC_C Cuts at: 443 3879 443 Size: 3436 3429 AclI AA'CG_TT Cuts at: 6705 6705 Size: 6865 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 649 4688 5120 5869 6137 649 Size: 4039 432 749 268 1377 Fragments arranged by size: 4039 1377 749 432 268 AflIII A'CryG_T Cuts at: 2327 4215 5321 6298 2327 Size: 1888 1106 977 2894 Fragments arranged by size: 2894 1888 1106 977 AgeI A'CCGG_T Cuts at: 5253 5253 Size: 6865 AleI CACnn'nnGTG Cuts at: 470 3346 3405 3460 470 Size: 2876 59 55 3875 Fragments arranged by size: 3875 2876 59 55 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 488 3490 488 Size: 3002 3863 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 1669 1701 1669 Size: 32 6833 AlwNI CAG_nnn'CTG Cuts at: 764 1430 2634 3247 4168 5737 764 Size: 666 1204 613 921 1569 1892 Fragments arranged by size: 1892 1569 1204 921 666 613 ApaI G_GGCC'C Cuts at: 247 824 1544 2748 3025 3313 247 Size: 577 720 1204 277 288 3799 Fragments arranged by size: 3799 1204 720 577 288 277 ApaLI G'TGCA_C Cuts at: 3708 5635 3708 Size: 1927 4938 ApoI r'AATT_y Cuts at: 2824 3867 6218 6474 2824 Size: 1043 2351 256 3215 Fragments arranged by size: 3215 2351 1043 256 AscI GG'CGCG_CC Cuts at: 250 250 Size: 6865 AseI AT'TA_AT Cuts at: 20 20 Size: 6865 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 6865 AvaI C'yCGr_G Cuts at: 256 389 505 823 1583 2455 2741 2747 2802 Size: 133 116 318 760 872 286 6 55 Cuts at: 2802 3034 3062 3344 3458 3883 256 Size: 232 28 282 114 425 3238 Fragments arranged by size: 3238 872 760 425 318 286 282 232 133 116 114 55 28 6 BamHI G'GATC_C Cuts at: 2718 3888 2718 Size: 1170 5695 BanI G'GyrC_C Cuts at: 443 983 1126 1916 2473 3407 3879 4293 4541 Size: 540 143 790 557 934 472 414 248 Cuts at: 4541 4576 443 Size: 35 2732 Fragments arranged by size: 2732 934 790 557 540 472 414 248 143 35 BanII G_rGCy'C Cuts at: 136 247 824 1544 2035 2606 2748 2795 2803 Size: 111 577 720 491 571 142 47 8 Cuts at: 2803 3025 3313 3603 3877 4907 136 Size: 222 288 290 274 1030 2094 Fragments arranged by size: 2094 1030 720 577 571 491 290 288 274 222 142 111 47 8 BbeI G_GCGC'C Cuts at: 4297 4545 4297 Size: 248 6617 BbsI GAAGACnn'nnnn_ Cuts at: 1744 1744 Size: 6865 BbvCI CC'TCA_GC Cuts at: 3237 3577 3237 Size: 340 6525 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 385 419 478 512 2985 3019 385 Size: 34 59 34 2473 34 4231 Fragments arranged by size: 4231 2473 59 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 2575 4761 5524 6865 2575 Size: 2186 763 1341 2575 Fragments arranged by size: 2575 2186 1341 763 BclI T'GATC_A Cuts at: 2835 4383 2835 Size: 1548 5317 BglI GCCn_nnn'nGGC Cuts at: 235 412 508 898 2006 2703 3217 235 Size: 177 96 390 1108 697 514 3883 Fragments arranged by size: 3883 1108 697 514 390 177 96 BglII A'GATC_T Cuts at: 1671 4378 6417 1671 Size: 2707 2039 2119 Fragments arranged by size: 2707 2119 2039 BlpI GC'TnA_GC Cuts at: 1510 3975 1510 Size: 2465 4400 Bme1580I G_kGCm'C Cuts at: 247 590 824 1544 1630 1859 1919 1994 2478 Size: 343 234 720 86 229 60 75 484 Cuts at: 2478 2748 3025 3074 3313 3479 3700 3712 4488 Size: 270 277 49 239 166 221 12 776 Cuts at: 4488 4581 5639 247 Size: 93 1058 1473 Fragments arranged by size: 1473 1058 776 720 484 343 277 270 239 234 229 221 166 93 86 75 60 49 12 BmgBI CAC'GTC Cuts at: 162 585 162 Size: 423 6442 BmrI ACTGGGnnnn_n' Cuts at: 1743 1981 1988 2269 3008 3028 3269 3443 4075 Size: 238 7 281 739 20 241 174 632 Cuts at: 4075 4156 4491 6637 1743 Size: 81 335 2146 1971 Fragments arranged by size: 2146 1971 739 632 335 281 241 238 174 81 20 7 BmtI G_CTAG'C Cuts at: 3047 3047 Size: 6865 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 1437 3453 3792 5230 1437 Size: 2016 339 1438 3072 Fragments arranged by size: 3072 2016 1438 339 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 907 1095 1407 2620 2771 2890 907 Size: 188 312 1213 151 119 4882 Fragments arranged by size: 4882 1213 312 188 151 119 Bpu10I CC'TnA_GC Cuts at: 476 3237 3577 476 Size: 2761 340 3764 Fragments arranged by size: 3764 2761 340 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 343 591 3251 3774 4039 4918 5412 5710 343 Size: 248 2660 523 265 879 494 298 1498 Fragments arranged by size: 2660 1498 879 523 494 298 265 248 BsaI GGTCTCn'nnnn_ Cuts at: 871 6569 871 Size: 5698 1167 BsaAI yAC'GTr Cuts at: 3129 3855 4216 3129 Size: 726 361 5778 Fragments arranged by size: 5778 726 361 BsaBI GATnn'nnATC Cuts at: 6 667 754 4377 6416 6 Size: 661 87 3623 2039 455 Fragments arranged by size: 3623 2039 661 455 87 BsaHI Gr'CG_yC Cuts at: 2079 4294 4542 5246 6742 2079 Size: 2215 248 704 1496 2202 Fragments arranged by size: 2215 2202 1496 704 248 BsaWI w'CCGG_w Cuts at: 138 1439 1464 4052 4573 5253 5527 5674 6085 Size: 1301 25 2588 521 680 274 147 411 Cuts at: 6085 138 Size: 918 Fragments arranged by size: 2588 1301 918 680 521 411 274 147 25 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1228 1258 1828 1858 1228 Size: 30 570 30 6235 Fragments arranged by size: 6235 570 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1395 1516 1519 1786 1891 2482 2956 3205 3219 Size: 121 3 267 105 591 474 249 14 Cuts at: 3219 3429 1395 Size: 210 4831 Fragments arranged by size: 4831 591 474 267 249 210 121 105 14 3 BseYI C'CCAG_C Cuts at: 238 559 1006 1140 1171 1384 1645 2125 2161 Size: 321 447 134 31 213 261 480 36 Cuts at: 2161 2393 2447 2605 2900 3073 3303 3634 4288 Size: 232 54 158 295 173 230 331 654 Cuts at: 4288 5046 5625 6121 238 Size: 758 579 496 982 Fragments arranged by size: 982 758 654 579 496 480 447 331 321 295 261 232 230 213 173 158 134 54 36 31 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 448 1204 1590 2764 3011 3413 448 Size: 756 386 1174 247 402 3900 Fragments arranged by size: 3900 1174 756 402 386 247 BsiEI CG_ry'CG Cuts at: 104 734 4405 4451 5661 104 Size: 630 3671 46 1210 1308 Fragments arranged by size: 3671 1308 1210 630 46 BsiHKAI G_wGCw'C Cuts at: 401 2998 3712 3877 4655 4845 5639 401 Size: 2597 714 165 778 190 794 1627 Fragments arranged by size: 2597 1627 794 778 714 190 165 BsmI GAATG_Cn' Cuts at: 601 601 Size: 6865 Bsp1286I G_dGCh'C Cuts at: 136 247 401 590 824 1544 1630 1859 1919 Size: 111 154 189 234 720 86 229 60 Cuts at: 1919 1994 2035 2478 2606 2748 2795 2803 2998 Size: 75 41 443 128 142 47 8 195 Cuts at: 2998 3025 3074 3313 3479 3603 3700 3712 3877 Size: 27 49 239 166 124 97 12 165 Cuts at: 3877 4488 4581 4655 4845 4907 5639 136 Size: 611 93 74 190 62 732 1362 Fragments arranged by size: 1362 732 720 611 443 239 234 229 195 190 189 166 165 154 142 128 124 111 97 93 86 75 74 62 60 49 47 41 27 12 8 BspEI T'CCGG_A Cuts at: 138 1439 1464 6085 138 Size: 1301 25 4621 918 Fragments arranged by size: 4621 1301 918 25 BspHI T'CATG_A Cuts at: 6041 6041 Size: 6865 BspMI ACCTGCnnnn'nnnn_ Cuts at: 188 831 3913 4127 4429 4810 188 Size: 643 3082 214 302 381 2243 Fragments arranged by size: 3082 2243 643 381 302 214 BsrBI CCG'CTC Cuts at: 50 1230 1244 1865 3487 3788 5155 5209 6695 Size: 1180 14 621 1622 301 1367 54 1486 Cuts at: 6695 6860 50 Size: 165 55 Fragments arranged by size: 1622 1486 1367 1180 621 301 165 55 54 14 BsrDI GCAATG_nn' Cuts at: 1599 2422 3179 4775 1599 Size: 823 757 1596 3689 Fragments arranged by size: 3689 1596 823 757 BsrFI r'CCGG_y Cuts at: 980 1196 1257 3410 4861 5042 5253 980 Size: 216 61 2153 1451 181 211 2592 Fragments arranged by size: 2592 2153 1451 216 211 181 61 BssHII G'CGCG_C Cuts at: 222 250 222 Size: 28 6837 BssSI C'ACGA_G Cuts at: 874 1629 2700 5134 5494 874 Size: 755 1071 2434 360 2245 Fragments arranged by size: 2434 2245 1071 755 360 BstAPI GCAn_nnn'nTGC Cuts at: 1663 2775 3247 4240 1663 Size: 1112 472 993 4288 Fragments arranged by size: 4288 1112 993 472 BstBI TT'CG_AA Cuts at: 110 110 Size: 6865 BstXI CCAn_nnnn'nTGG Cuts at: 642 1014 1074 3462 642 Size: 372 60 2388 4045 Fragments arranged by size: 4045 2388 372 60 BstYI r'GATC_y Cuts at: 1 1671 2431 2718 3888 4355 4378 4713 4959 Size: 1670 760 287 1170 467 23 335 246 Cuts at: 4959 5973 6059 6071 6417 1 Size: 1014 86 12 346 449 Fragments arranged by size: 1670 1170 1014 760 467 449 346 335 287 246 86 23 12 Bsu36I CC'TnA_GG Cuts at: 2384 3701 2384 Size: 1317 5548 BtgI C'CryG_G Cuts at: 125 734 1323 1351 1494 3215 125 Size: 609 589 28 143 1721 3775 Fragments arranged by size: 3775 1721 609 589 143 28 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 161 393 1403 4813 4994 5157 161 Size: 232 1010 3410 181 163 1869 Fragments arranged by size: 3410 1869 1010 232 181 163 BtsI GCAGTG_nn' Cuts at: 1461 1821 2016 3074 4106 1461 Size: 360 195 1058 1032 4220 Fragments arranged by size: 4220 1058 1032 360 195 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 3606 3641 3606 Size: 35 6830 DraI TTT'AAA Cuts at: 3862 3862 Size: 6865 DraIII CAC_nnn'GTG Cuts at: 375 3451 375 Size: 3076 3789 DrdI GACnn_nn'nnGTC Cuts at: 4569 5429 4569 Size: 860 6005 EaeI y'GGCC_r Cuts at: 227 731 768 1064 1280 1320 1596 1998 4448 Size: 504 37 296 216 40 276 402 2450 Cuts at: 4448 4622 5013 5040 6387 227 Size: 174 391 27 1347 705 Fragments arranged by size: 2450 1347 705 504 402 391 296 276 216 174 40 37 27 EagI C'GGCC_G Cuts at: 731 4448 731 Size: 3717 3148 EarI CTCTTCn'nnn_ Cuts at: 1351 2556 2921 4886 5096 1351 Size: 1205 365 1965 210 3120 Fragments arranged by size: 3120 1965 1205 365 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 430 907 1836 2482 3429 5071 5383 5529 6675 Size: 477 929 646 947 1642 312 146 1146 Cuts at: 6675 430 Size: 620 Fragments arranged by size: 1642 1146 947 929 646 620 477 312 146 EcoICRI GAG'CTC Cuts at: 3875 3875 Size: 6865 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 649 907 1095 1407 2620 2771 2890 4688 5120 Size: 258 188 312 1213 151 119 1798 432 Cuts at: 5120 5869 6137 649 Size: 749 268 1377 Fragments arranged by size: 1798 1377 1213 749 432 312 268 258 188 151 119 EcoNI CCTnn'n_nnAGG Cuts at: 553 2309 553 Size: 1756 5109 EcoO109I rG'GnC_Cy Cuts at: 243 595 639 820 1540 1541 2388 3022 3309 Size: 352 44 181 720 1 847 634 287 Cuts at: 3309 3319 4002 243 Size: 10 683 3106 Fragments arranged by size: 3106 847 720 683 634 352 287 181 44 10 1 EcoRI G'AATT_C Cuts at: 3867 3867 Size: 6865 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 4882 4882 Size: 6865 FspI TGC'GCA Cuts at: 166 184 4644 166 Size: 18 4460 2387 Fragments arranged by size: 4460 2387 18 HaeII r_GCGC'y Cuts at: 302 765 1214 2454 3338 3809 4297 4545 5569 Size: 463 449 1240 884 471 488 248 1024 Cuts at: 5569 6548 302 Size: 979 619 Fragments arranged by size: 1240 1024 979 884 619 488 471 463 449 248 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 139 171 2052 2084 2533 2565 3096 3128 3249 Size: 32 1881 32 449 32 531 32 121 Cuts at: 3249 3281 4705 4735 4737 4767 139 Size: 32 1424 30 2 30 2237 Fragments arranged by size: 2237 1881 1424 531 449 121 32 32 32 32 32 30 30 2 HincII GTy'rAC Cuts at: 3902 3902 Size: 6865 KasI G'GCGC_C Cuts at: 4293 4541 4293 Size: 248 6617 KpnI G_GTAC'C Cuts at: 447 3883 447 Size: 3436 3429 MluI A'CGCG_T Cuts at: 6298 6298 Size: 6865 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 971 2372 2390 5536 5720 971 Size: 1401 18 3146 184 2116 Fragments arranged by size: 3146 2116 1401 184 18 MscI TGG'CCA Cuts at: 770 1322 1598 4624 770 Size: 552 276 3026 3011 Fragments arranged by size: 3026 3011 552 276 MslI CAynn'nnrTG Cuts at: 470 796 1252 1783 1949 1966 2116 2249 2326 Size: 326 456 531 166 17 150 133 77 Cuts at: 2326 2953 3097 3103 3346 3405 3460 4852 4979 Size: 627 144 6 243 59 55 1392 127 Cuts at: 4979 470 Size: 2356 Fragments arranged by size: 2356 1392 627 531 456 326 243 166 150 144 133 127 77 59 55 17 6 MspA1I CmG'CkG Cuts at: 440 462 530 536 730 747 1268 1496 1604 Size: 22 68 6 194 17 521 228 108 Cuts at: 1604 2129 2288 2668 3145 3764 3974 4288 4648 Size: 525 159 380 477 619 210 314 360 Cuts at: 4648 5663 5908 440 Size: 1015 245 1397 Fragments arranged by size: 1397 1015 619 525 521 477 380 360 314 245 228 210 194 159 108 68 22 17 6 NaeI GCC'GGC Cuts at: 982 1259 3412 5044 982 Size: 277 2153 1632 2803 Fragments arranged by size: 2803 2153 1632 277 NarI GG'CG_CC Cuts at: 4294 4542 4294 Size: 248 6617 NcoI C'CATG_G Cuts at: 125 1323 3215 125 Size: 1198 1892 3775 Fragments arranged by size: 3775 1892 1198 NgoMIV G'CCGG_C Cuts at: 980 1257 3410 5042 980 Size: 277 2153 1632 2803 Fragments arranged by size: 2803 2153 1632 277 NheI G'CTAG_C Cuts at: 3043 3043 Size: 6865 NruI TCG'CGA Cuts at: 5226 5226 Size: 6865 NspI r_CATG'y Cuts at: 201 873 1965 2331 3171 3916 4416 5325 201 Size: 672 1092 366 840 745 500 909 1741 Fragments arranged by size: 1741 1092 909 840 745 672 500 366 PasI CC'CwG_GG Cuts at: 1473 1975 2712 3206 3756 1473 Size: 502 737 494 550 4582 Fragments arranged by size: 4582 737 550 502 494 PciI A'CATG_T Cuts at: 2327 5321 2327 Size: 2994 3871 PflMI CCAn_nnn'nTGG Cuts at: 1810 2094 1810 Size: 284 6581 PfoI T'CCnGG_A Cuts at: 884 2197 884 Size: 1313 5552 PmeI GTTT'AAAC Cuts at: 3862 3862 Size: 6865 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 6004 6036 6004 Size: 32 6833 PpuMI rG'GwC_Cy Cuts at: 595 2388 3319 595 Size: 1793 931 4141 Fragments arranged by size: 4141 1793 931 PspOMI G'GGCC_C Cuts at: 243 820 1540 2744 3021 3309 243 Size: 577 720 1204 277 288 3799 Fragments arranged by size: 3799 1204 720 577 288 277 PspXI vC'TCGA_Gb Cuts at: 256 256 Size: 6865 PstI C_TGCA'G Cuts at: 535 746 1671 2639 3189 3910 4595 535 Size: 211 925 968 550 721 685 2805 Fragments arranged by size: 2805 968 925 721 685 550 211 PvuI CG_AT'CG Cuts at: 104 104 Size: 6865 PvuII CAG'CTG Cuts at: 440 462 530 747 2668 3145 4288 4648 440 Size: 22 68 217 1921 477 1143 360 2657 Fragments arranged by size: 2657 1921 1143 477 360 217 68 22 RsrII CG'GwC_CG Cuts at: 5058 5058 Size: 6865 SacI G_AGCT'C Cuts at: 3877 3877 Size: 6865 SacII CC_GC'GG Cuts at: 1497 1497 Size: 6865 SalI G'TCGA_C Cuts at: 3900 3900 Size: 6865 SapI GCTCTTCn'nnn_ Cuts at: 4886 5096 4886 Size: 210 6655 SbfI CC_TGCA'GG Cuts at: 3910 3910 Size: 6865 ScaI AGT'ACT Cuts at: 262 6382 262 Size: 6120 745 SexAI A'CCwGG_T Cuts at: 371 371 Size: 6865 SfcI C'TryA_G Cuts at: 33 457 531 742 1667 2635 3185 3906 4591 Size: 424 74 211 925 968 550 721 685 Cuts at: 4591 5586 5777 33 Size: 995 191 1121 Fragments arranged by size: 1121 995 968 925 721 685 550 424 211 191 74 SfiI GGCCn_nnn'nGGCC Cuts at: 898 898 Size: 6865 SfoI GGC'GCC Cuts at: 4295 4543 4295 Size: 248 6617 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 6865 SmaI CCC'GGG Cuts at: 391 825 2457 2804 3036 3064 3346 3460 3885 Size: 434 1632 347 232 28 282 114 425 Cuts at: 3885 391 Size: 3371 Fragments arranged by size: 3371 1632 434 425 347 282 232 114 28 SmlI C'TyrA_G Cuts at: 256 322 570 3266 3789 4018 4933 5427 5689 Size: 66 248 2696 523 229 915 494 262 Cuts at: 5689 256 Size: 1432 Fragments arranged by size: 2696 1432 915 523 494 262 248 229 66 SnaBI TAC'GTA Cuts at: 3855 3855 Size: 6865 SpeI A'CTAG_T Cuts at: 67 67 Size: 6865 SphI G_CATG'C Cuts at: 201 3916 4416 201 Size: 3715 500 2650 Fragments arranged by size: 3715 2650 500 SspI AAT'ATT Cuts at: 2820 2820 Size: 6865 StuI AGG'CCT Cuts at: 3057 3582 3057 Size: 525 6340 StyI C'CwwG_G Cuts at: 125 549 635 1323 1640 1898 2723 3215 3605 Size: 424 86 688 317 258 825 492 390 Cuts at: 3605 3997 4351 125 Size: 392 354 2639 Fragments arranged by size: 2639 825 688 492 424 392 390 354 317 258 86 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1519 2461 2563 3462 4446 4579 5038 5249 1519 Size: 942 102 899 984 133 459 211 3135 Fragments arranged by size: 3135 984 942 899 459 211 133 102 TatI w'GTAC_w Cuts at: 260 1775 2945 6380 260 Size: 1515 1170 3435 745 Fragments arranged by size: 3435 1515 1170 745 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 1228 1260 1828 1860 6382 6414 1228 Size: 32 568 32 4522 32 1679 Fragments arranged by size: 4522 1679 568 32 32 32 Tth111I GACn'n_nGTC Cuts at: 1743 4660 1743 Size: 2917 3948 XbaI T'CTAG_A Cuts at: 3894 3894 Size: 6865 XcmI CCAnnnn_n'nnnnTGG Cuts at: 1951 2274 2685 3213 4358 1951 Size: 323 411 528 1145 4458 Fragments arranged by size: 4458 1145 528 411 323 XhoI C'TCGA_G Cuts at: 256 256 Size: 6865 XmaI C'CCGG_G Cuts at: 389 823 2455 2802 3034 3062 3344 3458 3883 Size: 434 1632 347 232 28 282 114 425 Cuts at: 3883 389 Size: 3371 Fragments arranged by size: 3371 1632 434 425 347 282 232 114 28 Enzymes that do cut: AarI AccI Acc65I AclI AcuI AflIII AgeI AleI AlfI AloI AlwNI ApaI ApaLI ApoI AscI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BbvCI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BssHII BssSI BstAPI BstBI BstXI BstYI Bsu36I BtgI BtgZI BtsI CspCI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FspI HaeII Hin4I HincII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NheI NruI NspI PasI PciI PflMI PfoI PmeI PpiI PpuMI PspOMI PspXI PstI PvuI PvuII RsrII SacI SacII SalI SapI SbfI ScaI SexAI SfcI SfiI SfoI SgfI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI Enzymes that do not cut: AatII AfeI AflII AhdI AvrII BaeI BfrBI BsiWI BsmBI BsrGI BstEII BstZ17I ClaI EcoRV FseI FspAI HindIII HpaI MfeI NdeI NotI NsiI PacI PmlI PshAI PsiI PsrI SanDI SgrAI SrfI SwaI XmnI ZraI