(Circular) (Six-base) MAPSORT of: pF1KSDB0004.seq Check: 6381 from: 1 to: 6397 pF1KSDB0004 6397 bp With 182 enzymes: SgfI * June 20, 2008 10:36 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 2408 2666 2408 Size: 258 6139 AatII G_ACGT'C Cuts at: 2777 2777 Size: 6397 AccI GT'mk_AC Cuts at: 3433 3433 Size: 6397 Acc65I G'GTAC_C Cuts at: 3411 3411 Size: 6397 AclI AA'CG_TT Cuts at: 6237 6237 Size: 6397 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 804 1686 4220 4652 5401 5669 804 Size: 882 2534 432 749 268 1532 Fragments arranged by size: 2534 1532 882 749 432 268 AfeI AGC'GCT Cuts at: 2576 2576 Size: 6397 AflIII A'CryG_T Cuts at: 3747 4853 5830 3747 Size: 1106 977 4314 Fragments arranged by size: 4314 1106 977 AgeI A'CCGG_T Cuts at: 897 4785 897 Size: 3888 2509 AleI CACnn'nnGTG Cuts at: 598 2402 598 Size: 1804 4593 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 2176 2208 2176 Size: 32 6365 AlwNI CAG_nnn'CTG Cuts at: 611 1298 1310 1446 1671 1767 3216 3308 3700 Size: 687 12 136 225 96 1449 92 392 Cuts at: 3700 5269 611 Size: 1569 1739 Fragments arranged by size: 1739 1569 1449 687 392 225 136 96 92 12 ApaI G_GGCC'C Cuts at: 631 784 1616 3374 631 Size: 153 832 1758 3654 Fragments arranged by size: 3654 1758 832 153 ApaLI G'TGCA_C Cuts at: 1170 2500 5167 1170 Size: 1330 2667 2400 Fragments arranged by size: 2667 2400 1330 ApoI r'AATT_y Cuts at: 3399 5750 6006 3399 Size: 2351 256 3790 Fragments arranged by size: 3790 2351 256 AseI AT'TA_AT Cuts at: 20 20 Size: 6397 AsiSI GCG_AT'CGC Cuts at: 104 104 Size: 6397 AvaI C'yCGr_G Cuts at: 739 957 1074 1354 1362 1609 1615 2886 2934 Size: 218 117 280 8 247 6 1271 48 Cuts at: 2934 3415 739 Size: 481 3721 Fragments arranged by size: 3721 1271 481 280 247 218 117 48 8 6 BamHI G'GATC_C Cuts at: 653 3420 653 Size: 2767 3630 BanI G'GyrC_C Cuts at: 748 900 1042 1867 2083 2203 2311 2396 2845 Size: 152 142 825 216 120 108 85 449 Cuts at: 2845 3411 3825 4073 4108 748 Size: 566 414 248 35 3037 Fragments arranged by size: 3037 825 566 449 414 248 216 152 142 120 108 85 35 BanII G_rGCy'C Cuts at: 416 479 554 631 784 948 958 1256 1616 Size: 63 75 77 153 164 10 298 360 Cuts at: 1616 2141 2414 2957 3080 3374 3409 4439 416 Size: 525 273 543 123 294 35 1030 2374 Fragments arranged by size: 2374 1030 543 525 360 298 294 273 164 153 123 77 75 63 35 10 BbeI G_GCGC'C Cuts at: 1871 2087 3829 4077 1871 Size: 216 1742 248 4191 Fragments arranged by size: 4191 1742 248 216 BbsI GAAGACnn'nnnn_ Cuts at: 1692 2433 1692 Size: 741 5656 BbvCI CC'TCA_GC Cuts at: 1439 2713 1439 Size: 1274 5123 BciVI GTATCCnnnnn_n' Cuts at: 4293 5056 6397 4293 Size: 763 1341 4293 Fragments arranged by size: 4293 1341 763 BclI T'GATC_A Cuts at: 3915 3915 Size: 6397 BglI GCCn_nnn'nGGC Cuts at: 1301 1336 1479 2388 2860 3038 1301 Size: 35 143 909 472 178 4660 Fragments arranged by size: 4660 909 472 178 143 35 BglII A'GATC_T Cuts at: 3910 5949 3910 Size: 2039 4358 BlpI GC'TnA_GC Cuts at: 247 2113 3507 247 Size: 1866 1394 3137 Fragments arranged by size: 3137 1866 1394 Bme1580I G_kGCm'C Cuts at: 631 784 1174 1616 2314 2399 2504 2848 3374 Size: 153 390 442 698 85 105 344 526 Cuts at: 3374 4020 4113 5171 631 Size: 646 93 1058 1857 Fragments arranged by size: 1857 1058 698 646 526 442 390 344 153 105 93 85 BmgBI CAC'GTC Cuts at: 708 708 Size: 6397 BmrI ACTGGGnnnn_n' Cuts at: 2835 3607 3688 4023 6169 2835 Size: 772 81 335 2146 3063 Fragments arranged by size: 3063 2146 772 335 81 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2613 4762 2613 Size: 2149 4248 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1039 1119 2026 2608 2623 2803 2850 1039 Size: 80 907 582 15 180 47 4586 Fragments arranged by size: 4586 907 582 180 80 47 15 Bpu10I CC'TnA_GC Cuts at: 1439 1789 2713 1439 Size: 350 924 5123 Fragments arranged by size: 5123 924 350 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 3571 4450 4944 5242 3571 Size: 879 494 298 4726 Fragments arranged by size: 4726 879 494 298 BsaI GGTCTCn'nnnn_ Cuts at: 6101 6101 Size: 6397 BsaAI yAC'GTr Cuts at: 1500 1721 1901 2916 3123 3387 3748 1500 Size: 221 180 1015 207 264 361 4149 Fragments arranged by size: 4149 1015 361 264 221 207 180 BsaBI GATnn'nnATC Cuts at: 6 3909 5948 6 Size: 3903 2039 455 Fragments arranged by size: 3903 2039 455 BsaHI Gr'CG_yC Cuts at: 1868 2084 2438 2642 2774 2987 3826 4074 4778 Size: 216 354 204 132 213 839 248 704 Cuts at: 4778 6274 1868 Size: 1496 1991 Fragments arranged by size: 1991 1496 839 704 354 248 216 213 204 132 BsaWI w'CCGG_w Cuts at: 897 3584 4105 4785 5059 5206 5617 897 Size: 2687 521 680 274 147 411 1677 Fragments arranged by size: 2687 1677 680 521 411 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 719 749 1094 1124 2176 2206 2464 2494 719 Size: 30 345 30 1052 30 258 30 4622 Fragments arranged by size: 4622 1052 345 258 30 30 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 271 523 526 535 544 547 550 1945 2149 Size: 252 3 9 9 3 3 1395 204 Cuts at: 2149 271 Size: 4519 Fragments arranged by size: 4519 1395 252 204 9 9 3 3 3 BseYI C'CCAG_C Cuts at: 563 765 783 884 914 962 967 1291 1454 Size: 202 18 101 30 48 5 324 163 Cuts at: 1454 1770 2188 2542 2966 3230 3820 4578 5157 Size: 316 418 354 424 264 590 758 579 Cuts at: 5157 5653 563 Size: 496 1307 Fragments arranged by size: 1307 758 590 579 496 424 418 354 324 316 264 202 163 101 48 30 18 5 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 144 267 571 1213 1669 1880 2005 2548 3103 Size: 123 304 642 456 211 125 543 555 Cuts at: 3103 3120 3145 3187 144 Size: 17 25 42 3354 Fragments arranged by size: 3354 642 555 543 456 304 211 125 123 42 25 17 BsiEI CG_ry'CG Cuts at: 104 137 179 698 1819 3379 3937 3983 5193 Size: 33 42 519 1121 1560 558 46 1210 Cuts at: 5193 104 Size: 1308 Fragments arranged by size: 1560 1308 1210 1121 558 519 46 42 33 BsiHKAI G_wGCw'C Cuts at: 196 1174 1207 2414 2504 3409 4187 4377 5171 Size: 978 33 1207 90 905 778 190 794 Cuts at: 5171 196 Size: 1422 Fragments arranged by size: 1422 1207 978 905 794 778 190 90 33 Bsp1286I G_dGCh'C Cuts at: 196 416 479 554 631 784 948 958 1174 Size: 220 63 75 77 153 164 10 216 Cuts at: 1174 1207 1256 1616 2141 2314 2399 2414 2504 Size: 33 49 360 525 173 85 15 90 Cuts at: 2504 2848 2957 3080 3374 3409 4020 4113 4187 Size: 344 109 123 294 35 611 93 74 Cuts at: 4187 4377 4439 5171 196 Size: 190 62 732 1422 Fragments arranged by size: 1422 732 611 525 360 344 294 220 216 190 173 164 153 123 109 93 90 85 77 75 74 63 62 49 35 33 15 10 BspEI T'CCGG_A Cuts at: 5617 5617 Size: 6397 BspHI T'CATG_A Cuts at: 5573 5573 Size: 6397 BspMI ACCTGCnnnn'nnnn_ Cuts at: 430 2408 2666 3055 3125 3201 3445 3659 3961 Size: 1978 258 389 70 76 244 214 302 Cuts at: 3961 4342 430 Size: 381 2485 Fragments arranged by size: 2485 1978 389 381 302 258 244 214 76 70 BsrBI CCG'CTC Cuts at: 50 544 1815 1833 2592 3021 3342 4687 4741 Size: 494 1271 18 759 429 321 1345 54 Cuts at: 4741 6227 6392 50 Size: 1486 165 55 Fragments arranged by size: 1486 1345 1271 759 494 429 321 165 55 54 18 BsrDI GCAATG_nn' Cuts at: 4307 4307 Size: 6397 BsrFI r'CCGG_y Cuts at: 178 697 897 931 1060 1945 2080 3247 3358 Size: 519 200 34 129 885 135 1167 111 Cuts at: 3358 4393 4574 4785 178 Size: 1035 181 211 1790 Fragments arranged by size: 1790 1167 1035 885 519 211 200 181 135 129 111 34 BsrGI T'GTAC_A Cuts at: 2927 2927 Size: 6397 BssHII G'CGCG_C Cuts at: 2555 2745 2555 Size: 190 6207 BssSI C'ACGA_G Cuts at: 3025 4666 5026 3025 Size: 1641 360 4396 Fragments arranged by size: 4396 1641 360 BstAPI GCAn_nnn'nTGC Cuts at: 1310 1671 1767 3047 3772 1310 Size: 361 96 1280 725 3935 Fragments arranged by size: 3935 1280 725 361 96 BstBI TT'CG_AA Cuts at: 110 110 Size: 6397 BstXI CCAn_nnnn'nTGG Cuts at: 1246 1914 1246 Size: 668 5729 BstYI r'GATC_y Cuts at: 1 653 3420 3887 3910 4245 4491 5505 5591 Size: 652 2767 467 23 335 246 1014 86 Cuts at: 5591 5603 5949 1 Size: 12 346 449 Fragments arranged by size: 2767 1014 652 467 449 346 335 246 86 23 12 Bsu36I CC'TnA_GG Cuts at: 662 905 1477 662 Size: 243 572 5582 Fragments arranged by size: 5582 572 243 BtgI C'CryG_G Cuts at: 125 131 470 599 649 1031 1634 1907 2338 Size: 6 339 129 50 382 603 273 431 Cuts at: 2338 2483 2561 2645 2957 3012 125 Size: 145 78 84 312 55 3510 Fragments arranged by size: 3510 603 431 382 339 312 273 145 129 84 78 55 50 6 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 3262 4345 4526 4689 3262 Size: 1083 181 163 4970 Fragments arranged by size: 4970 1083 181 163 BtsI GCAGTG_nn' Cuts at: 496 1086 1263 1402 1416 1672 1738 2436 3133 Size: 590 177 139 14 256 66 698 697 Cuts at: 3133 3638 496 Size: 505 3255 Fragments arranged by size: 3255 698 697 590 505 256 177 139 66 14 DraI TTT'AAA Cuts at: 3394 3394 Size: 6397 DraIII CAC_nnn'GTG Cuts at: 711 711 Size: 6397 DrdI GACnn_nn'nnGTC Cuts at: 4101 4961 4101 Size: 860 5537 EaeI y'GGCC_r Cuts at: 128 176 180 467 602 695 1097 1816 2012 Size: 48 4 287 135 93 402 719 196 Cuts at: 2012 2069 2380 2389 2549 2706 2981 3980 4154 Size: 57 311 9 160 157 275 999 174 Cuts at: 4154 4545 4572 5919 128 Size: 391 27 1347 606 Fragments arranged by size: 1347 999 719 606 402 391 311 287 275 196 174 160 157 135 93 57 48 27 9 4 EagI C'GGCC_G Cuts at: 176 695 1816 3980 176 Size: 519 1121 2164 2593 Fragments arranged by size: 2593 2164 1121 519 EarI CTCTTCn'nnn_ Cuts at: 1019 1963 2620 4418 4628 1019 Size: 944 657 1798 210 2788 Fragments arranged by size: 2788 1798 944 657 210 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 562 1825 4603 4915 5061 6207 562 Size: 1263 2778 312 146 1146 752 Fragments arranged by size: 2778 1263 1146 752 312 146 EcoICRI GAG'CTC Cuts at: 2412 3407 2412 Size: 995 5402 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 804 1039 1119 1686 2026 2608 2623 2803 2850 Size: 235 80 567 340 582 15 180 47 Cuts at: 2850 4220 4652 5401 5669 804 Size: 1370 432 749 268 1532 Fragments arranged by size: 1532 1370 749 582 567 432 340 268 235 180 80 47 15 EcoNI CCTnn'n_nnAGG Cuts at: 304 304 Size: 6397 EcoO109I rG'GnC_Cy Cuts at: 381 627 666 780 810 971 2883 3213 3326 Size: 246 39 114 30 161 1912 330 113 Cuts at: 3326 3371 3534 381 Size: 45 163 3244 Fragments arranged by size: 3244 1912 330 246 163 161 114 113 45 39 30 EcoRI G'AATT_C Cuts at: 3399 3399 Size: 6397 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 4414 4414 Size: 6397 FseI GG_CCGG'CC Cuts at: 182 182 Size: 6397 FspI TGC'GCA Cuts at: 4176 4176 Size: 6397 HaeII r_GCGC'y Cuts at: 189 1362 1796 1871 2011 2087 2107 2578 2637 Size: 1173 434 75 140 76 20 471 59 Cuts at: 2637 3829 4077 5101 6080 189 Size: 1192 248 1024 979 506 Fragments arranged by size: 1192 1173 1024 979 506 471 434 248 140 76 75 59 20 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 979 1011 4237 4267 4269 4299 979 Size: 32 3226 30 2 30 3077 Fragments arranged by size: 3226 3077 32 30 30 2 HincII GTy'rAC Cuts at: 2145 3434 2145 Size: 1289 5108 KasI G'GCGC_C Cuts at: 1867 2083 3825 4073 1867 Size: 216 1742 248 4191 Fragments arranged by size: 4191 1742 248 216 KpnI G_GTAC'C Cuts at: 3415 3415 Size: 6397 MluI A'CGCG_T Cuts at: 5830 5830 Size: 6397 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 117 2396 5068 5252 117 Size: 2279 2672 184 1262 Fragments arranged by size: 2672 2279 1262 184 MscI TGG'CCA Cuts at: 130 469 604 2014 2071 2382 4156 130 Size: 339 135 1410 57 311 1774 2371 Fragments arranged by size: 2371 1774 1410 339 311 135 57 MslI CAynn'nnrTG Cuts at: 598 1498 2230 2402 2677 3085 4384 4511 598 Size: 900 732 172 275 408 1299 127 2484 Fragments arranged by size: 2484 1299 900 732 408 275 172 127 MspA1I CmG'CkG Cuts at: 281 425 787 888 1458 1509 1636 1974 1983 Size: 144 362 101 570 51 127 338 9 Cuts at: 1983 2366 2702 2768 3014 3381 3506 3820 4180 Size: 383 336 66 246 367 125 314 360 Cuts at: 4180 5195 5440 281 Size: 1015 245 1238 Fragments arranged by size: 1238 1015 570 383 367 362 360 338 336 314 246 245 144 127 125 101 66 51 9 NaeI GCC'GGC Cuts at: 180 699 933 1062 1947 3249 4576 180 Size: 519 234 129 885 1302 1327 2001 Fragments arranged by size: 2001 1327 1302 885 519 234 129 NarI GG'CG_CC Cuts at: 1868 2084 3826 4074 1868 Size: 216 1742 248 4191 Fragments arranged by size: 4191 1742 248 216 NcoI C'CATG_G Cuts at: 125 125 Size: 6397 NgoMIV G'CCGG_C Cuts at: 178 697 931 1060 1945 3247 4574 178 Size: 519 234 129 885 1302 1327 2001 Fragments arranged by size: 2001 1327 1302 885 519 234 129 NruI TCG'CGA Cuts at: 4758 4758 Size: 6397 NspI r_CATG'y Cuts at: 1497 1929 2278 3448 3948 4857 1497 Size: 432 349 1170 500 909 3037 Fragments arranged by size: 3037 1170 909 500 432 349 PasI CC'CwG_GG Cuts at: 806 951 806 Size: 145 6252 PciI A'CATG_T Cuts at: 4853 4853 Size: 6397 PflMI CCAn_nnn'nTGG Cuts at: 2661 2919 3270 2661 Size: 258 351 5788 Fragments arranged by size: 5788 351 258 PfoI T'CCnGG_A Cuts at: 677 1238 2288 2353 2618 677 Size: 561 1050 65 265 4456 Fragments arranged by size: 4456 1050 561 265 65 PmeI GTTT'AAAC Cuts at: 3394 3394 Size: 6397 PmlI CAC'GTG Cuts at: 1500 1721 1901 2916 3123 1500 Size: 221 180 1015 207 4774 Fragments arranged by size: 4774 1015 221 207 180 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 2176 2208 5536 5568 2176 Size: 32 3328 32 3005 Fragments arranged by size: 3328 3005 32 32 PpuMI rG'GwC_Cy Cuts at: 381 810 2883 3213 3326 381 Size: 429 2073 330 113 3452 Fragments arranged by size: 3452 2073 429 330 113 PshAI GACnn'nnGTC Cuts at: 1320 1320 Size: 6397 PspOMI G'GGCC_C Cuts at: 627 780 1612 3370 627 Size: 153 832 1758 3654 Fragments arranged by size: 3654 1758 832 153 PspXI vC'TCGA_Gb Cuts at: 2934 2934 Size: 6397 PstI C_TGCA'G Cuts at: 845 893 940 1763 2111 3442 4127 845 Size: 48 47 823 348 1331 685 3115 Fragments arranged by size: 3115 1331 823 685 348 48 47 PvuI CG_AT'CG Cuts at: 104 104 Size: 6397 PvuII CAG'CTG Cuts at: 425 787 888 1983 2366 2768 3820 4180 425 Size: 362 101 1095 383 402 1052 360 2642 Fragments arranged by size: 2642 1095 1052 402 383 362 360 101 RsrII CG'GwC_CG Cuts at: 4590 4590 Size: 6397 SacI G_AGCT'C Cuts at: 2414 3409 2414 Size: 995 5402 SacII CC_GC'GG Cuts at: 1637 3015 1637 Size: 1378 5019 SalI G'TCGA_C Cuts at: 3432 3432 Size: 6397 SanDI GG'GwC_CC Cuts at: 810 2883 3326 810 Size: 2073 443 3881 Fragments arranged by size: 3881 2073 443 SapI GCTCTTCn'nnn_ Cuts at: 2620 4418 4628 2620 Size: 1798 210 4389 Fragments arranged by size: 4389 1798 210 SbfI CC_TGCA'GG Cuts at: 1763 3442 1763 Size: 1679 4718 ScaI AGT'ACT Cuts at: 5914 5914 Size: 6397 SexAI A'CCwGG_T Cuts at: 1153 1823 1874 1153 Size: 670 51 5676 Fragments arranged by size: 5676 670 51 SfcI C'TryA_G Cuts at: 33 841 889 936 1759 2107 3438 4123 5118 Size: 808 48 47 823 348 1331 685 995 Cuts at: 5118 5309 33 Size: 191 1121 Fragments arranged by size: 1331 1121 995 823 808 685 348 191 48 47 SfiI GGCCn_nnn'nGGCC Cuts at: 1336 2388 1336 Size: 1052 5345 SfoI GGC'GCC Cuts at: 1869 2085 3827 4075 1869 Size: 216 1742 248 4191 Fragments arranged by size: 4191 1742 248 216 SgfI GCG_AT'CGC Cuts at: 104 104 Size: 6397 SgrAI Cr'CCGG_yG Cuts at: 897 2080 897 Size: 1183 5214 SmaI CCC'GGG Cuts at: 741 1364 1611 3417 741 Size: 623 247 1806 3721 Fragments arranged by size: 3721 1806 623 247 SmlI C'TyrA_G Cuts at: 2934 3550 4465 4959 5221 2934 Size: 616 915 494 262 4110 Fragments arranged by size: 4110 915 616 494 262 SnaBI TAC'GTA Cuts at: 3387 3387 Size: 6397 SpeI A'CTAG_T Cuts at: 67 67 Size: 6397 SphI G_CATG'C Cuts at: 1497 2278 3448 3948 1497 Size: 781 1170 500 3946 Fragments arranged by size: 3946 1170 781 500 SrfI GCCC'GGGC Cuts at: 1364 1364 Size: 6397 StuI AGG'CCT Cuts at: 313 2066 2863 3112 3295 313 Size: 1753 797 249 183 3415 Fragments arranged by size: 3415 1753 797 249 183 StyI C'CwwG_G Cuts at: 125 416 1535 3107 3320 3529 3883 125 Size: 291 1119 1572 213 209 354 2639 Fragments arranged by size: 2639 1572 1119 354 291 213 209 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 1276 1977 2191 3277 3978 4111 4570 4781 1276 Size: 701 214 1086 701 133 459 211 2892 Fragments arranged by size: 2892 1086 701 701 459 214 211 133 TatI w'GTAC_w Cuts at: 2927 5912 2927 Size: 2985 3412 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 386 418 719 751 1094 1126 1885 1917 5914 Size: 32 301 32 343 32 759 32 3997 Cuts at: 5914 5946 386 Size: 32 837 Fragments arranged by size: 3997 837 759 343 301 32 32 32 32 32 Tth111I GACn'n_nGTC Cuts at: 2464 4192 2464 Size: 1728 4669 XbaI T'CTAG_A Cuts at: 3426 3426 Size: 6397 XcmI CCAnnnn_n'nnnnTGG Cuts at: 1914 2064 2559 3890 1914 Size: 150 495 1331 4421 Fragments arranged by size: 4421 1331 495 150 XhoI C'TCGA_G Cuts at: 2934 2934 Size: 6397 XmaI C'CCGG_G Cuts at: 739 1362 1609 3415 739 Size: 623 247 1806 3721 Fragments arranged by size: 3721 1806 623 247 ZraI GAC'GTC Cuts at: 2775 2775 Size: 6397 Enzymes that do cut: AarI AatII AccI Acc65I AclI AcuI AfeI AflIII AgeI AleI AloI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbeI BbsI BbvCI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstXI BstYI Bsu36I BtgI BtgZI BtsI DraI DraIII DrdI EaeI EagI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I EcoRI FalI FseI FspI HaeII Hin4I HincII KasI KpnI MluI MmeI MscI MslI MspA1I NaeI NarI NcoI NgoMIV NruI NspI PasI PciI PflMI PfoI PmeI PmlI PpiI PpuMI PshAI PspOMI PspXI PstI PvuI PvuII RsrII SacI SacII SalI SanDI SapI SbfI ScaI SexAI SfcI SfiI SfoI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SrfI StuI StyI TaqII TatI TstI Tth111I XbaI XcmI XhoI XmaI ZraI Enzymes that do not cut: AflII AhdI AlfI AscI AvrII BaeI BcgI BfrBI BmtI BsiWI BsmI BsmBI BstEII BstZ17I ClaI CspCI EcoRV FspAI HindIII HpaI MfeI NdeI NheI NotI NsiI PacI PsiI PsrI SspI SwaI XmnI