Result of FASTA (ccds) for
pF1KSDB0046
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDB0046, 1975 aa
1>>>pF1KSDB0046 1975 - 1975 aa - 1975 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.5854+/-0.00106; mu= 6.2121+/- 0.064
mean_var=228.2928+/-45.412, 0's: 0 Z-trim(110.3): 14 B-trim: 99 in 2/51
Lambda= 0.084884
statistics sampled from 11505 (11510) to 11505 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.354), width: 16
Scan time: 6.220
The best scores are: opt bits E(32554)
CCDS45251.1 TP53BP1 gene_id:7158|Hs108|chr15 (1975) 13040 1611.5 0
CCDS45250.1 TP53BP1 gene_id:7158|Hs108|chr15 (1977) 13026 1609.8 0
CCDS10096.1 TP53BP1 gene_id:7158|Hs108|chr15 (1972) 12988 1605.1 0
>>CCDS45251.1 TP53BP1 gene_id:7158|Hs108|chr15 (1975 aa)
initn: 13040 init1: 13040 opt: 13040 Z-score: 8636.3 bits: 1611.5 E(32554): 0
Smith-Waterman score: 13040; 100.0% identity (100.0% similar) in 1975 aa overlap (1-1975:1-1975)
10 20 30 40 50 60
pF1KSD MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NPVLDVVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NPVLDVVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RTSSVLGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTTHSLGAEDTASSQLGFGVLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RTSSVLGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTTHSLGAEDTASSQLGFGVLEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SQSQDVEENTVPYEVDKEQLQSVTTNSGYTRLSDVDANTAIKHEEQSNEDIPIAEQSSKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SQSQDVEENTVPYEVDKEQLQSVTTNSGYTRLSDVDANTAIKHEEQSNEDIPIAEQSSKD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IPVTAQPSKDVHVVKEQNPPPARSEDMPFSPKASVAAMEAKEQLSAQELMESGLQIQKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IPVTAQPSKDVHVVKEQNPPPARSEDMPFSPKASVAAMEAKEQLSAQELMESGLQIQKSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EPEVLSTQEDLFDQSNKTVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQRSLVQDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EPEVLSTQEDLFDQSNKTVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQRSLVQDSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD STNSSDLVAPSPDAFRSTPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKKLQSGEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 STNSSDLVAPSPDAFRSTPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKKLQSGEPV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ELENPPLLPESTVSPQASTPISQSTPVFPPGSLPIPSQPQFSHDIFIPSPSLEEQSNDGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ELENPPLLPESTVSPQASTPISQSTPVFPPGSLPIPSQPQFSHDIFIPSPSLEEQSNDGK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD KDGDMHSSSLTVECSKTSEIEPKNSPEDLGLSLTGDSCKLMLSTSEYSQSPKMESLSSHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KDGDMHSSSLTVECSKTSEIEPKNSPEDLGLSLTGDSCKLMLSTSEYSQSPKMESLSSHR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IDEDGENTQIEDTEPMSPVLNSKFVPAENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IDEDGENTQIEDTEPMSPVLNSKFVPAENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD DISILATGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DISILATGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHP
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD EEGSSGSEVEEIPETPCESQGEELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EEGSSGSEVEEIPETPCESQGEELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD MEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD EGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD PLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSF
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD CESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 CESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDV
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD MSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGER
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD KNGSTAVAESVASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KNGSTAVAESVASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD KLEGDHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KLEGDHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTN
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD KENPSKALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KENPSKALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDAT
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD VQTERGSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VQTERGSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVIT
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD DVYYVDGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DVYYVDGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRT
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KSD SSGTSLSAMHSSGSSGKGAGPLRGKTSGTEPADFALPSSRGGPGKLSPRKGVSQTGTPVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SSGTSLSAMHSSGSSGKGAGPLRGKTSGTEPADFALPSSRGGPGKLSPRKGVSQTGTPVC
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KSD EEDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EEDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKS
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KSD FSRVVPRVPDSTRRTDVGAGALRRSDSPEIPFQAAAGPSDGLDASSPGNSFVGLRVVAKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FSRVVPRVPDSTRRTDVGAGALRRSDSPEIPFQAAAGPSDGLDASSPGNSFVGLRVVAKW
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KSD SSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KSD GVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAA
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KSD DISLDNLVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DISLDNLVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEE
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KSD ERSPAKRGRKSATVKPVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNKTLFLGYAFLLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ERSPAKRGRKSATVKPVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNKTLFLGYAFLLT
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KSD MATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCN
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KSD TAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 TAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQ
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KSD RILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVF
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970
pF1KSD DVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
1930 1940 1950 1960 1970
>>CCDS45250.1 TP53BP1 gene_id:7158|Hs108|chr15 (1977 aa)
initn: 11131 init1: 11131 opt: 13026 Z-score: 8627.0 bits: 1609.8 E(32554): 0
Smith-Waterman score: 13026; 99.9% identity (99.9% similar) in 1977 aa overlap (1-1975:1-1977)
10 20 30 40 50 60
pF1KSD MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD NPVLDVVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NPVLDVVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD RTSSVLGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTTHSLGAEDTASSQLGFGVLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RTSSVLGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTTHSLGAEDTASSQLGFGVLEL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD SQSQDVEENTVPYEVDKEQLQSVTTNSGYTRLSDVDANTAIKHEEQSNEDIPIAEQSSKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SQSQDVEENTVPYEVDKEQLQSVTTNSGYTRLSDVDANTAIKHEEQSNEDIPIAEQSSKD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD IPVTAQPSKDVHVVKEQNPPPARSEDMPFSPKASVAAMEAKEQLSAQELMESGLQIQKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IPVTAQPSKDVHVVKEQNPPPARSEDMPFSPKASVAAMEAKEQLSAQELMESGLQIQKSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD EPEVLSTQEDLFDQSNKTVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQRSLVQDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EPEVLSTQEDLFDQSNKTVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQRSLVQDSL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD STNSSDLVAPSPDAFRSTPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKKLQSGEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 STNSSDLVAPSPDAFRSTPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKKLQSGEPV
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD ELENPPLLPESTVSPQASTPISQSTPVFPPGSLPIPSQPQFSHDIFIPSPSLEEQSNDGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 ELENPPLLPESTVSPQASTPISQSTPVFPPGSLPIPSQPQFSHDIFIPSPSLEEQSNDGK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD KDGDMHSSSLTVECSKTSEIEPKNSPEDLGLSLTGDSCKLMLSTSEYSQSPKMESLSSHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KDGDMHSSSLTVECSKTSEIEPKNSPEDLGLSLTGDSCKLMLSTSEYSQSPKMESLSSHR
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD IDEDGENTQIEDTEPMSPVLNSKFVPAENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 IDEDGENTQIEDTEPMSPVLNSKFVPAENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRD
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD DISILATGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DISILATGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHP
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD EEGSSGSEVEEIPETPCESQGEELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EEGSSGSEVEEIPETPCESQGEELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEA
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD MEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD EGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSL
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD PLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 PLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSF
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD CESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 CESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDV
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD MSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGER
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD KNGSTAVAESVASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KNGSTAVAESVASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KSD KLEGDHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KLEGDHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTN
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KSD KENPSKALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 KENPSKALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDAT
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KSD VQTERGSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VQTERGSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVIT
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KSD DVYYVDGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DVYYVDGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRT
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KSD SSGTSLSAMHSSGSSGKGAGPLRGKTSGTEPADFALPSSRGGPGKLSPRKGVSQTGTPVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SSGTSLSAMHSSGSSGKGAGPLRGKTSGTEPADFALPSSRGGPGKLSPRKGVSQTGTPVC
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KSD EEDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EEDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKS
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KSD FSRVVPRVPDSTRRTDVGAGALRRSDSPEIPFQAAAGPSDGLDASSPGNSFVGLRVVAKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FSRVVPRVPDSTRRTDVGAGALRRSDSPEIPFQAAAGPSDGLDASSPGNSFVGLRVVAKW
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KSD SSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSA
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KSD GVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAA
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KSD DISLDNLVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DISLDNLVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEE
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730
pF1KSD ERSPAKRGRKSATVKP--VGAGEFVSPCESGDNTGEPSALEEQRGPLPLNKTLFLGYAFL
:::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS45 ERSPAKRGRKSATVKPGAVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNKTLFLGYAFL
1690 1700 1710 1720 1730 1740
1740 1750 1760 1770 1780 1790
pF1KSD LTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 LTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQ
1750 1760 1770 1780 1790 1800
1800 1810 1820 1830 1840 1850
pF1KSD CNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 CNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLE
1810 1820 1830 1840 1850 1860
1860 1870 1880 1890 1900 1910
pF1KSD EQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALG
1870 1880 1890 1900 1910 1920
1920 1930 1940 1950 1960 1970
pF1KSD VFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 VFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
1930 1940 1950 1960 1970
>>CCDS10096.1 TP53BP1 gene_id:7158|Hs108|chr15 (1972 aa)
initn: 11093 init1: 11093 opt: 12988 Z-score: 8601.9 bits: 1605.1 E(32554): 0
Smith-Waterman score: 12988; 99.9% identity (99.9% similar) in 1972 aa overlap (6-1975:1-1972)
10 20 30 40 50 60
pF1KSD MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKE
10 20 30 40 50
70 80 90 100 110 120
pF1KSD NPVLDVVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 NPVLDVVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPN
60 70 80 90 100 110
130 140 150 160 170 180
pF1KSD RTSSVLGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTTHSLGAEDTASSQLGFGVLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 RTSSVLGMSVESAPAVEEEKGEELEQKEKEKEEDTSGNTTHSLGAEDTASSQLGFGVLEL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KSD SQSQDVEENTVPYEVDKEQLQSVTTNSGYTRLSDVDANTAIKHEEQSNEDIPIAEQSSKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SQSQDVEENTVPYEVDKEQLQSVTTNSGYTRLSDVDANTAIKHEEQSNEDIPIAEQSSKD
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD IPVTAQPSKDVHVVKEQNPPPARSEDMPFSPKASVAAMEAKEQLSAQELMESGLQIQKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 IPVTAQPSKDVHVVKEQNPPPARSEDMPFSPKASVAAMEAKEQLSAQELMESGLQIQKSP
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD EPEVLSTQEDLFDQSNKTVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQRSLVQDSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EPEVLSTQEDLFDQSNKTVSSDGCSTPSREEGGCSLASTPATTLHLLQLSGQRSLVQDSL
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD STNSSDLVAPSPDAFRSTPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKKLQSGEPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 STNSSDLVAPSPDAFRSTPFIVPSSPTEQEGRQDKPMDTSVLSEEGGEPFQKKLQSGEPV
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD ELENPPLLPESTVSPQASTPISQSTPVFPPGSLPIPSQPQFSHDIFIPSPSLEEQSNDGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 ELENPPLLPESTVSPQASTPISQSTPVFPPGSLPIPSQPQFSHDIFIPSPSLEEQSNDGK
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD KDGDMHSSSLTVECSKTSEIEPKNSPEDLGLSLTGDSCKLMLSTSEYSQSPKMESLSSHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KDGDMHSSSLTVECSKTSEIEPKNSPEDLGLSLTGDSCKLMLSTSEYSQSPKMESLSSHR
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD IDEDGENTQIEDTEPMSPVLNSKFVPAENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 IDEDGENTQIEDTEPMSPVLNSKFVPAENDSILMNPAQDGEVQLSQNDDKTKGDDTDTRD
540 550 560 570 580 590
610 620 630 640 650 660
pF1KSD DISILATGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DISILATGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHP
600 610 620 630 640 650
670 680 690 700 710 720
pF1KSD EEGSSGSEVEEIPETPCESQGEELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EEGSSGSEVEEIPETPCESQGEELKEENMESVPLHLSLTETQSQGLCLQKEMPKKECSEA
660 670 680 690 700 710
730 740 750 760 770 780
pF1KSD MEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MEVETSVISIDSPQKLAILDQELEHKEQEAWEEATSEDSSVVIVDVKEPSPRVDVSCEPL
720 730 740 750 760 770
790 800 810 820 830 840
pF1KSD EGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EGVEKCSDSQSWEDIAPEIEPCAENRLDTKEEKSVEYEGDLKSGTAETEPVEQDSSQPSL
780 790 800 810 820 830
850 860 870 880 890 900
pF1KSD PLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 PLVRADDPLRLDQELQQPQTQEKTSNSLTEDSKMANAKQLSSDAEAQKLGKPSAHASQSF
840 850 860 870 880 890
910 920 930 940 950 960
pF1KSD CESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 CESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDV
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KSD MSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MSESMVETHDPILGSGKGDSGAAPDVDDKLCLRMKLVSPETEASEESLQFNLEKPATGER
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KSD KNGSTAVAESVASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KNGSTAVAESVASPQKTMSVLSCICEARQENEARSEDPPTTPIRGNLLHFPSSQGEEEKE
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130 1140
pF1KSD KLEGDHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KLEGDHTIRQSQQPMKPISPVKDPVSPASQKMVIQGPSSPQGEAMVTDVLEDQKEGRSTN
1080 1090 1100 1110 1120 1130
1150 1160 1170 1180 1190 1200
pF1KSD KENPSKALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KENPSKALIERPSQNNIGIQTMECSLRVPETVSAATQTIKNVCEQGTSTVDQNFGKQDAT
1140 1150 1160 1170 1180 1190
1210 1220 1230 1240 1250 1260
pF1KSD VQTERGSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VQTERGSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVIT
1200 1210 1220 1230 1240 1250
1270 1280 1290 1300 1310 1320
pF1KSD DVYYVDGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DVYYVDGTEVERKVTEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRT
1260 1270 1280 1290 1300 1310
1330 1340 1350 1360 1370 1380
pF1KSD SSGTSLSAMHSSGSSGKGAGPLRGKTSGTEPADFALPSSRGGPGKLSPRKGVSQTGTPVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SSGTSLSAMHSSGSSGKGAGPLRGKTSGTEPADFALPSSRGGPGKLSPRKGVSQTGTPVC
1320 1330 1340 1350 1360 1370
1390 1400 1410 1420 1430 1440
pF1KSD EEDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EEDGDAGLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVPGPLGIEDISPNLSPDDKS
1380 1390 1400 1410 1420 1430
1450 1460 1470 1480 1490 1500
pF1KSD FSRVVPRVPDSTRRTDVGAGALRRSDSPEIPFQAAAGPSDGLDASSPGNSFVGLRVVAKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 FSRVVPRVPDSTRRTDVGAGALRRSDSPEIPFQAAAGPSDGLDASSPGNSFVGLRVVAKW
1440 1450 1460 1470 1480 1490
1510 1520 1530 1540 1550 1560
pF1KSD SSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 SSNGYFYSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSA
1500 1510 1520 1530 1540 1550
1570 1580 1590 1600 1610 1620
pF1KSD GVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 GVVKGHRKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAA
1560 1570 1580 1590 1600 1610
1630 1640 1650 1660 1670 1680
pF1KSD DISLDNLVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 DISLDNLVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEE
1620 1630 1640 1650 1660 1670
1690 1700 1710 1720 1730
pF1KSD ERSPAKRGRKSATVKP--VGAGEFVSPCESGDNTGEPSALEEQRGPLPLNKTLFLGYAFL
:::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS10 ERSPAKRGRKSATVKPGAVGAGEFVSPCESGDNTGEPSALEEQRGPLPLNKTLFLGYAFL
1680 1690 1700 1710 1720 1730
1740 1750 1760 1770 1780 1790
pF1KSD LTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQ
1740 1750 1760 1770 1780 1790
1800 1810 1820 1830 1840 1850
pF1KSD CNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 CNTAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLE
1800 1810 1820 1830 1840 1850
1860 1870 1880 1890 1900 1910
pF1KSD EQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 EQRILDWQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALG
1860 1870 1880 1890 1900 1910
1920 1930 1940 1950 1960 1970
pF1KSD VFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 VFDVVVTDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
1920 1930 1940 1950 1960 1970
1975 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 08:21:04 2016 done: Thu Nov 3 08:21:05 2016
Total Scan time: 6.220 Total Display time: 0.380
Function used was FASTA [36.3.4 Apr, 2011]