Result of FASTA (ccds) for
pF1KSDB0052
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDB0052, 621 aa
1>>>pF1KSDB0052 621 - 621 aa - 621 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4729+/-0.000788; mu= 18.8684+/- 0.047
mean_var=77.1871+/-15.044, 0's: 0 Z-trim(108.7): 20 B-trim: 0 in 0/51
Lambda= 0.145983
statistics sampled from 10344 (10356) to 10344 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.318), width: 16
Scan time: 3.830
The best scores are: opt bits E(32554)
CCDS41979.1 C14orf159 gene_id:80017|Hs108|chr14 ( 621) 4206 895.5 0
CCDS32141.1 C14orf159 gene_id:80017|Hs108|chr14 ( 616) 4154 884.5 0
CCDS66693.1 C14orf159 gene_id:80017|Hs108|chr14 ( 581) 3291 702.7 3.3e-202
CCDS45150.1 C14orf159 gene_id:80017|Hs108|chr14 ( 564) 1887 407.0 3.3e-113
CCDS73677.1 C14orf159 gene_id:80017|Hs108|chr14 ( 159) 568 128.9 5.1e-30
>>CCDS41979.1 C14orf159 gene_id:80017|Hs108|chr14 (621 aa)
initn: 4206 init1: 4206 opt: 4206 Z-score: 4784.8 bits: 895.5 E(32554): 0
Smith-Waterman score: 4206; 99.8% identity (100.0% similar) in 621 aa overlap (1-621:1-621)
10 20 30 40 50 60
pF1KSD MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FLGCSFSLEEALEKAGLPRRDPAGHSQAGAYKTTVPCVTHAGFCCPLVVTMRPIPKDKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FLGCSFSLEEALEKAGLPRRDPAGHSQAGAYKTTVPCVTHAGFCCPLVVTMRPIPKDKLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD SNCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 SSCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
550 560 570 580 590 600
610 620
pF1KSD PFHNTHAEMIQKLVDVTTAQV
:::::::::::::::::::::
CCDS41 PFHNTHAEMIQKLVDVTTAQV
610 620
>>CCDS32141.1 C14orf159 gene_id:80017|Hs108|chr14 (616 aa)
initn: 3186 init1: 3186 opt: 4154 Z-score: 4725.6 bits: 884.5 E(32554): 0
Smith-Waterman score: 4154; 99.0% identity (99.2% similar) in 621 aa overlap (1-621:1-616)
10 20 30 40 50 60
pF1KSD MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FLGCSFSLEEALEKAGLPRRDPAGHSQAGAYKTTVPCVTHAGFCCPLVVTMRPIPKDKLE
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS32 FLGCSFSLEEALEKAGLPRRDPAGHSQ-----TTVPCVTHAGFCCPLVVTMRPIPKDKLE
130 140 150 160 170
190 200 210 220 230 240
pF1KSD GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KSD SNCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SSCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
240 250 260 270 280 290
310 320 330 340 350 360
pF1KSD RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
300 310 320 330 340 350
370 380 390 400 410 420
pF1KSD GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
360 370 380 390 400 410
430 440 450 460 470 480
pF1KSD FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
420 430 440 450 460 470
490 500 510 520 530 540
pF1KSD TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS
480 490 500 510 520 530
550 560 570 580 590 600
pF1KSD CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
540 550 560 570 580 590
610 620
pF1KSD PFHNTHAEMIQKLVDVTTAQV
:::::::::::::::::::::
CCDS32 PFHNTHAEMIQKLVDVTTAQV
600 610
>>CCDS66693.1 C14orf159 gene_id:80017|Hs108|chr14 (581 aa)
initn: 3317 init1: 3290 opt: 3291 Z-score: 3743.7 bits: 702.7 E(32554): 3.3e-202
Smith-Waterman score: 3847; 93.4% identity (93.6% similar) in 621 aa overlap (1-621:1-581)
10 20 30 40 50 60
pF1KSD MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FLGCSFSLEEALEKAGLPRRDPAGHSQAGAYKTTVPCVTHAGFCCPLVVTMRPIPKDKLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FLGCSFSLEEALEKAGLPRRDPAGHSQAGAYKTTVPCVTHAGFCCPLVVTMRPIPKDKLE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD SNCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SSCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS
::: :::::::::::::::::
CCDS66 TGV----------------------------------------SNWGGYALACALYILYS
490 500
550 560 570 580 590 600
pF1KSD CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
510 520 530 540 550 560
610 620
pF1KSD PFHNTHAEMIQKLVDVTTAQV
:::::::::::::::::::::
CCDS66 PFHNTHAEMIQKLVDVTTAQV
570 580
>>CCDS45150.1 C14orf159 gene_id:80017|Hs108|chr14 (564 aa)
initn: 2871 init1: 1886 opt: 1887 Z-score: 2145.8 bits: 407.0 E(32554): 3.3e-113
Smith-Waterman score: 3667; 90.7% identity (90.8% similar) in 621 aa overlap (1-621:1-564)
10 20 30 40 50 60
pF1KSD MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD FLGCSFSLEEALEKAGLPRRDPAGHSQAGAYKTTVPCVTHAGFCCPLVVTMRPIPKDKLE
::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS45 FLGCSFSLEEALEKAGLPRRDPAGHSQ-----TTVPCVTHAGFCCPLVVTMRPIPKDKLE
130 140 150 160 170
190 200 210 220 230 240
pF1KSD GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
:::::::::: ::::::::::::::::::::::::::::::::::::::
CCDS45 GLVRACCSLG------------ELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
180 190 200 210 220
250 260 270 280 290 300
pF1KSD SNCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SSCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
230 240 250 260 270 280
310 320 330 340 350 360
pF1KSD RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
290 300 310 320 330 340
370 380 390 400 410 420
pF1KSD GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
350 360 370 380 390 400
430 440 450 460 470 480
pF1KSD FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
410 420 430 440 450 460
490 500 510 520 530 540
pF1KSD TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS
::: :::::::::::::::::
CCDS45 TGV----------------------------------------SNWGGYALACALYILYS
470 480
550 560 570 580 590 600
pF1KSD CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
490 500 510 520 530 540
610 620
pF1KSD PFHNTHAEMIQKLVDVTTAQV
:::::::::::::::::::::
CCDS45 PFHNTHAEMIQKLVDVTTAQV
550 560
>>CCDS73677.1 C14orf159 gene_id:80017|Hs108|chr14 (159 aa)
initn: 603 init1: 568 opt: 568 Z-score: 652.4 bits: 128.9 E(32554): 5.1e-30
Smith-Waterman score: 568; 97.7% identity (98.9% similar) in 87 aa overlap (1-87:1-87)
10 20 30 40 50 60
pF1KSD MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
::::::::::::::::::::::::: .
CCDS73 GPLPLLGQSEPEKWMLPPQGAISETSLRDLHSAWHRTSLMTVAQERAALPTVLTPSPITW
70 80 90 100 110 120
621 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 08:21:46 2016 done: Thu Nov 3 08:21:47 2016
Total Scan time: 3.830 Total Display time: 0.070
Function used was FASTA [36.3.4 Apr, 2011]