Result of FASTA (omim) for
pF1KSDB0059
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDB0059, 1137 aa
1>>>pF1KSDB0059 1137 - 1137 aa - 1137 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1554+/-0.000361; mu= 23.7425+/- 0.023
mean_var=80.4756+/-16.008, 0's: 0 Z-trim(114.4): 97 B-trim: 0 in 0/50
Lambda= 0.142969
statistics sampled from 24135 (24233) to 24135 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.284), width: 16
Scan time: 11.850
The best scores are: opt bits E(85289)
NP_002197 (OMIM: 600536,613204) integrin alpha-7 i (1137) 7704 1599.6 0
XP_005268899 (OMIM: 600536,613204) PREDICTED: inte (1131) 7646 1587.6 0
NP_001138468 (OMIM: 600536,613204) integrin alpha- (1141) 7444 1546.0 0
XP_005268903 (OMIM: 600536,613204) PREDICTED: inte (1024) 6930 1439.9 0
XP_005268907 (OMIM: 600536,613204) PREDICTED: inte ( 979) 6625 1377.0 0
NP_001138469 (OMIM: 600536,613204) integrin alpha- (1044) 6509 1353.1 0
XP_005268905 (OMIM: 600536,613204) PREDICTED: inte (1023) 6142 1277.4 0
XP_005268906 (OMIM: 600536,613204) PREDICTED: inte (1023) 6142 1277.4 0
XP_016874754 (OMIM: 600536,613204) PREDICTED: inte (1051) 6142 1277.4 0
XP_005268901 (OMIM: 600536,613204) PREDICTED: inte (1068) 6142 1277.4 0
XP_005268896 (OMIM: 600536,613204) PREDICTED: inte (1181) 6142 1277.4 0
XP_005268897 (OMIM: 600536,613204) PREDICTED: inte (1175) 6091 1266.9 0
XP_005268898 (OMIM: 600536,613204) PREDICTED: inte (1162) 5633 1172.4 0
NP_000201 (OMIM: 147556,226730) integrin alpha-6 i (1073) 3020 633.5 2.1e-180
NP_001073286 (OMIM: 147556,226730) integrin alpha- (1091) 3020 633.5 2.2e-180
XP_006712574 (OMIM: 147556,226730) PREDICTED: inte (1058) 2987 626.6 2.4e-178
XP_006712573 (OMIM: 147556,226730) PREDICTED: inte (1076) 2987 626.7 2.4e-178
NP_001303235 (OMIM: 147556,226730) integrin alpha- ( 954) 2582 543.1 3.1e-153
XP_016859496 (OMIM: 147556,226730) PREDICTED: inte ( 959) 2471 520.2 2.4e-146
XP_016859494 (OMIM: 147556,226730) PREDICTED: inte ( 977) 2471 520.2 2.4e-146
XP_016859497 (OMIM: 147556,226730) PREDICTED: inte ( 944) 2465 518.9 5.6e-146
XP_016859495 (OMIM: 147556,226730) PREDICTED: inte ( 962) 2465 518.9 5.7e-146
NP_002198 (OMIM: 603963) integrin alpha-9 precurso (1035) 811 177.8 3e-43
XP_011518054 (OMIM: 191830,604063) PREDICTED: inte ( 799) 633 141.0 2.8e-32
NP_000876 (OMIM: 192975) integrin alpha-4 isoform (1032) 634 141.3 2.9e-32
XP_016858112 (OMIM: 604042) PREDICTED: integrin al (1180) 594 133.1 9.8e-30
XP_016858116 (OMIM: 604042) PREDICTED: integrin al ( 835) 592 132.6 1e-29
XP_011544151 (OMIM: 153370) PREDICTED: integrin al (1074) 559 125.8 1.4e-27
XP_006721107 (OMIM: 153370) PREDICTED: integrin al (1087) 559 125.9 1.4e-27
NP_002200 (OMIM: 153370) integrin alpha-L isoform (1170) 559 125.9 1.4e-27
XP_005254285 (OMIM: 604789) PREDICTED: integrin al (1086) 553 124.6 3.2e-27
XP_011519665 (OMIM: 604789) PREDICTED: integrin al (1119) 553 124.6 3.3e-27
NP_001004439 (OMIM: 604789) integrin alpha-11 prec (1188) 553 124.7 3.5e-27
NP_001107852 (OMIM: 153370) integrin alpha-L isofo (1086) 552 124.4 3.7e-27
XP_005255370 (OMIM: 153370) PREDICTED: integrin al (1169) 552 124.4 3.9e-27
XP_005257365 (OMIM: 605025,614748) PREDICTED: inte ( 916) 549 123.7 5e-27
NP_002195 (OMIM: 605025,614748) integrin alpha-3 p (1051) 549 123.8 5.6e-27
NP_000623 (OMIM: 120980,609939) integrin alpha-M i (1152) 468 107.1 6.4e-22
XP_016878705 (OMIM: 120980,609939) PREDICTED: inte ( 917) 466 106.6 7.2e-22
XP_011544152 (OMIM: 120980,609939) PREDICTED: inte (1091) 466 106.7 8.2e-22
NP_001139280 (OMIM: 120980,609939) integrin alpha- (1153) 466 106.7 8.5e-22
XP_011544154 (OMIM: 151510) PREDICTED: integrin al ( 798) 446 102.4 1.1e-20
NP_000878 (OMIM: 151510) integrin alpha-X isoform (1163) 446 102.6 1.5e-20
NP_001273304 (OMIM: 151510) integrin alpha-X isofo (1169) 446 102.6 1.5e-20
XP_016880076 (OMIM: 604682) PREDICTED: integrin al ( 848) 442 101.6 2.1e-20
XP_011522130 (OMIM: 604682) PREDICTED: integrin al (1137) 442 101.7 2.6e-20
XP_011522129 (OMIM: 604682) PREDICTED: integrin al (1163) 442 101.7 2.7e-20
NP_002199 (OMIM: 604682) integrin alpha-E precurso (1179) 442 101.8 2.7e-20
XP_011522127 (OMIM: 604682) PREDICTED: integrin al (1185) 442 101.8 2.7e-20
XP_016880075 (OMIM: 604682) PREDICTED: integrin al (1191) 442 101.8 2.7e-20
>>NP_002197 (OMIM: 600536,613204) integrin alpha-7 isofo (1137 aa)
initn: 7704 init1: 7704 opt: 7704 Z-score: 8580.8 bits: 1599.6 E(85289): 0
Smith-Waterman score: 7704; 100.0% identity (100.0% similar) in 1137 aa overlap (1-1137:1-1137)
10 20 30 40 50 60
pF1KSD MAGARSRDPWGASGICYLFGSLLVELLFSRAVAFNLDVMGALRKEGEPGSLFGFSVALHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MAGARSRDPWGASGICYLFGSLLVELLFSRAVAFNLDVMGALRKEGEPGSLFGFSVALHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD QLQPRPQSWLLVGAPQALALPGQQANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QLQPRPQSWLLVGAPQALALPGQQANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 NQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD WKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 WKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YKTLDPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 YKTLDPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD QGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 QGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD VVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD RLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 RLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD TEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 TEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDS
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD LHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEV
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD ELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKV
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD KYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KSD ILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVF
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KSD SCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 SCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVI
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KSD PVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130
pF1KSD VKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 VKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
1090 1100 1110 1120 1130
>>XP_005268899 (OMIM: 600536,613204) PREDICTED: integrin (1131 aa)
initn: 4112 init1: 4112 opt: 7646 Z-score: 8516.1 bits: 1587.6 E(85289): 0
Smith-Waterman score: 7646; 99.5% identity (99.5% similar) in 1137 aa overlap (1-1137:1-1131)
10 20 30 40 50 60
pF1KSD MAGARSRDPWGASGICYLFGSLLVELLFSRAVAFNLDVMGALRKEGEPGSLFGFSVALHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAGARSRDPWGASGICYLFGSLLVELLFSRAVAFNLDVMGALRKEGEPGSLFGFSVALHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD QLQPRPQSWLLVGAPQALALPGQQANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QLQPRPQSWLLVGAPQALALPGQQANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD WKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD YKTLDPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YKTLDPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD SASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLN
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD QGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLG
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD VVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD VSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQV
:::::::::::::::::::::::::::::::::::::::::: ::::::::::::
XP_005 VSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTV------DADTDRRLRGQV
490 500 510 520 530
550 560 570 580 590 600
pF1KSD PRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTP
540 550 560 570 580 590
610 620 630 640 650 660
pF1KSD RLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSD
600 610 620 630 640 650
670 680 690 700 710 720
pF1KSD TEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDS
660 670 680 690 700 710
730 740 750 760 770 780
pF1KSD LHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEV
720 730 740 750 760 770
790 800 810 820 830 840
pF1KSD ELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKV
780 790 800 810 820 830
850 860 870 880 890 900
pF1KSD KYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPN
840 850 860 870 880 890
910 920 930 940 950 960
pF1KSD ILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVF
900 910 920 930 940 950
970 980 990 1000 1010 1020
pF1KSD SCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVI
960 970 980 990 1000 1010
1030 1040 1050 1060 1070 1080
pF1KSD PVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHA
1020 1030 1040 1050 1060 1070
1090 1100 1110 1120 1130
pF1KSD VKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
1080 1090 1100 1110 1120 1130
>>NP_001138468 (OMIM: 600536,613204) integrin alpha-7 is (1141 aa)
initn: 7454 init1: 5898 opt: 7444 Z-score: 8290.9 bits: 1546.0 E(85289): 0
Smith-Waterman score: 7444; 97.0% identity (97.3% similar) in 1148 aa overlap (1-1137:1-1141)
10 20 30 40 50 60
pF1KSD MAGARSRDPWGASGICYLFGSLLVELLFSRAVAFNLDVMGALRKEGEPGSLFGFSVALHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAGARSRDPWGASGICYLFGSLLVELLFSRAVAFNLDVMGALRKEGEPGSLFGFSVALHR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD QLQPRPQSWLLVGAPQALALPGQQANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLQPRPQSWLLVGAPQALALPGQQANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD NQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGE
130 140 150 160 170 180
190 200 210 220 230
pF1KSD WKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGLLFVT-----NIDSSD
:::::::::::::::::::::::::::::::::::::::::::: : . : .
NP_001 WKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAH
190 200 210 220 230 240
240 250 260 270 280
pF1KSD PDQLVY-----KTLDPADRL-PGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRAN
:. : : :: :: : :: :::.::::::::::::::::::::::::::
NP_001 LDDGPYEAGGEKEQDP--RLIPVPA-----NSYFGFSIDSGKGLVRAEELSFVAGAPRAN
250 260 270 280 290
290 300 310 320 330 340
pF1KSD HKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQE
300 310 320 330 340 350
350 360 370 380 390 400
pF1KSD ELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDG
360 370 380 390 400 410
410 420 430 440 450 460
pF1KSD KVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLF
420 430 440 450 460 470
470 480 490 500 510 520
pF1KSD RARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLD
480 490 500 510 520 530
530 540 550 560 570 580
pF1KSD ADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAI
540 550 560 570 580 590
590 600 610 620 630 640
pF1KSD VVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQL
600 610 620 630 640 650
650 660 670 680 690 700
pF1KSD VRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAH
660 670 680 690 700 710
710 720 730 740 750 760
pF1KSD EAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTS
720 730 740 750 760 770
770 780 790 800 810 820
pF1KSD GISIETTELEVELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GISIETTELEVELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERA
780 790 800 810 820 830
830 840 850 860 870 880
pF1KSD MQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGP
840 850 860 870 880 890
890 900 910 920 930 940
pF1KSD GQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLD
900 910 920 930 940 950
950 960 970 980 990 1000
pF1KSD CARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIK
960 970 980 990 1000 1010
1010 1020 1030 1040 1050 1060
pF1KSD NLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAK
1020 1030 1040 1050 1060 1070
1070 1080 1090 1100 1110 1120
pF1KSD HPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPD
1080 1090 1100 1110 1120 1130
1130
pF1KSD GHPGPGTA
::::::::
NP_001 GHPGPGTA
1140
>>XP_005268903 (OMIM: 600536,613204) PREDICTED: integrin (1024 aa)
initn: 6930 init1: 6930 opt: 6930 Z-score: 7718.6 bits: 1439.9 E(85289): 0
Smith-Waterman score: 6930; 100.0% identity (100.0% similar) in 1024 aa overlap (114-1137:1-1024)
90 100 110 120 130 140
pF1KSD QANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKENQWLGVSVRSQGPGGKIVTCAHR
::::::::::::::::::::::::::::::
XP_005 MQKESKENQWLGVSVRSQGPGGKIVTCAHR
10 20 30
150 160 170 180 190 200
pF1KSD YEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAA
40 50 60 70 80 90
210 220 230 240 250 260
pF1KSD AFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYL
100 110 120 130 140 150
270 280 290 300 310 320
pF1KSD GFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYS
160 170 180 190 200 210
330 340 350 360 370 380
pF1KSD LAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGI
220 230 240 250 260 270
390 400 410 420 430 440
pF1KSD SLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSL
280 290 300 310 320 330
450 460 470 480 490 500
pF1KSD SGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCV
340 350 360 370 380 390
510 520 530 540 550 560
pF1KSD DLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWL
400 410 420 430 440 450
570 580 590 600 610 620
pF1KSD KHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQP
460 470 480 490 500 510
630 640 650 660 670 680
pF1KSD STQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQP
520 530 540 550 560 570
690 700 710 720 730 740
pF1KSD VIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENA
580 590 600 610 620 630
750 760 770 780 790 800
pF1KSD SHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFI
640 650 660 670 680 690
810 820 830 840 850 860
pF1KSD ELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNI
700 710 720 730 740 750
870 880 890 900 910 920
pF1KSD MWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQE
760 770 780 790 800 810
930 940 950 960 970 980
pF1KSD PGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNST
820 830 840 850 860 870
990 1000 1010 1020 1030 1040
pF1KSD FLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILL
880 890 900 910 920 930
1050 1060 1070 1080 1090 1100
pF1KSD AVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNN
940 950 960 970 980 990
1110 1120 1130
pF1KSD WGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
::::::::::::::::::::::::::::::::::
XP_005 WGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
1000 1010 1020
>>XP_005268907 (OMIM: 600536,613204) PREDICTED: integrin (979 aa)
initn: 6625 init1: 6625 opt: 6625 Z-score: 7378.8 bits: 1377.0 E(85289): 0
Smith-Waterman score: 6625; 100.0% identity (100.0% similar) in 979 aa overlap (159-1137:1-979)
130 140 150 160 170 180
pF1KSD RSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRP
::::::::::::::::::::::::::::::
XP_005 MIGRCFVLSQDLAIRDELDGGEWKFCEGRP
10 20 30
190 200 210 220 230 240
pF1KSD QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLVYKTLDPAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGLLFVTNIDSSDPDQLVYKTLDPAD
40 50 60 70 80 90
250 260 270 280 290 300
pF1KSD RLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPE
100 110 120 130 140 150
310 320 330 340 350 360
pF1KSD VMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGI
160 170 180 190 200 210
370 380 390 400 410 420
pF1KSD SPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQV
220 230 240 250 260 270
430 440 450 460 470 480
pF1KSD LEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSI
280 290 300 310 320 330
490 500 510 520 530 540
pF1KSD DLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSR
340 350 360 370 380 390
550 560 570 580 590 600
pF1KSD NLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPG
400 410 420 430 440 450
610 620 630 640 650 660
pF1KSD QGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPM
460 470 480 490 500 510
670 680 690 700 710 720
pF1KSD DVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRA
520 530 540 550 560 570
730 740 750 760 770 780
pF1KSD LDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATIS
580 590 600 610 620 630
790 800 810 820 830 840
pF1KSD EQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSN
640 650 660 670 680 690
850 860 870 880 890 900
pF1KSD QGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDS
700 710 720 730 740 750
910 920 930 940 950 960
pF1KSD RDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFD
760 770 780 790 800 810
970 980 990 1000 1010 1020
pF1KSD RAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDP
820 830 840 850 860 870
1030 1040 1050 1060 1070 1080
pF1KSD MAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDR
880 890 900 910 920 930
1090 1100 1110 1120 1130
pF1KSD QQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
940 950 960 970
>>NP_001138469 (OMIM: 600536,613204) integrin alpha-7 is (1044 aa)
initn: 6511 init1: 5898 opt: 6509 Z-score: 7249.1 bits: 1353.1 E(85289): 0
Smith-Waterman score: 6509; 94.7% identity (95.8% similar) in 1036 aa overlap (114-1137:17-1044)
90 100 110 120 130 140
pF1KSD QANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKENQ-WLGVSVRSQGPGGKIVTCAH
.:.... : : ..: . :: ::::
NP_001 MAPFATPMVQALTTTRIQRQAEGFQCWRECGTRRSPFEGK-ETCAH
10 20 30 40
150 160 170 180 190 200
pF1KSD RYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTA
50 60 70 80 90 100
210 220 230 240 250
pF1KSD AAFSPDSHYLLFGAPGTYNWKGLLFVT-----NIDSSDPDQLVY-----KTLDPADRL-P
:::::::::::::::::::::: : . : . :. : : :: :: :
NP_001 AAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDGPYEAGGEKEQDP--RLIP
110 120 130 140 150 160
260 270 280 290 300 310
pF1KSD GPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVML
:: :::.::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPA-----NSYFGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVML
170 180 190 200 210
320 330 340 350 360 370
pF1KSD SGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPL
220 230 240 250 260 270
380 390 400 410 420 430
pF1KSD RLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEG
280 290 300 310 320 330
440 450 460 470 480 490
pF1KSD EAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLE
340 350 360 370 380 390
500 510 520 530 540 550
pF1KSD QPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLE
400 410 420 430 440 450
560 570 580 590 600 610
pF1KSD EPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGL
460 470 480 490 500 510
620 630 640 650 660 670
pF1KSD PPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVD
520 530 540 550 560 570
680 690 700 710 720 730
pF1KSD GTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDP
580 590 600 610 620 630
740 750 760 770 780 790
pF1KSD AEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQE
640 650 660 670 680 690
800 810 820 830 840 850
pF1KSD LHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQ
700 710 720 730 740 750
860 870 880 890 900 910
pF1KSD SLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDR
760 770 780 790 800 810
920 930 940 950 960 970
pF1KSD RRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAA
820 830 840 850 860 870
980 990 1000 1010 1020 1030
pF1KSD VLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAV
880 890 900 910 920 930
1040 1050 1060 1070 1080 1090
pF1KSD VAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQF
940 950 960 970 980 990
1100 1110 1120 1130
pF1KSD KEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
1000 1010 1020 1030 1040
>>XP_005268905 (OMIM: 600536,613204) PREDICTED: integrin (1023 aa)
initn: 6142 init1: 6142 opt: 6142 Z-score: 6840.2 bits: 1277.4 E(85289): 0
Smith-Waterman score: 6527; 95.7% identity (95.7% similar) in 1023 aa overlap (159-1137:1-1023)
130 140 150 160 170 180
pF1KSD RSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRP
::::::::::::::::::::::::::::::
XP_005 MIGRCFVLSQDLAIRDELDGGEWKFCEGRP
10 20 30
190 200 210 220
pF1KSD QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKG------------------------
::::::::::::::::::::::::::::::::::::
XP_005 QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDGPYEA
40 50 60 70 80 90
230 240 250 260
pF1KSD --------------------LLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLG
::::::::::::::::::::::::::::::::::::::::
XP_005 GGEKEQDPRLIPVPANSYFGLLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLG
100 110 120 130 140 150
270 280 290 300 310 320
pF1KSD FSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSL
160 170 180 190 200 210
330 340 350 360 370 380
pF1KSD AVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGIS
220 230 240 250 260 270
390 400 410 420 430 440
pF1KSD LAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLS
280 290 300 310 320 330
450 460 470 480 490 500
pF1KSD GSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVD
340 350 360 370 380 390
510 520 530 540 550 560
pF1KSD LRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLK
400 410 420 430 440 450
570 580 590 600 610 620
pF1KSD HQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPS
460 470 480 490 500 510
630 640 650 660 670 680
pF1KSD TQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPV
520 530 540 550 560 570
690 700 710 720 730 740
pF1KSD IGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENAS
580 590 600 610 620 630
750 760 770 780 790 800
pF1KSD HVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFIE
640 650 660 670 680 690
810 820 830 840 850 860
pF1KSD LPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIM
700 710 720 730 740 750
870 880 890 900 910 920
pF1KSD WPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEP
760 770 780 790 800 810
930 940 950 960 970 980
pF1KSD GERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTF
820 830 840 850 860 870
990 1000 1010 1020 1030 1040
pF1KSD LEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLA
880 890 900 910 920 930
1050 1060 1070 1080 1090 1100
pF1KSD VLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNW
940 950 960 970 980 990
1110 1120 1130
pF1KSD GSPRREGPDAHPILAADGHPELGPDGHPGPGTA
:::::::::::::::::::::::::::::::::
XP_005 GSPRREGPDAHPILAADGHPELGPDGHPGPGTA
1000 1010 1020
>>XP_005268906 (OMIM: 600536,613204) PREDICTED: integrin (1023 aa)
initn: 6142 init1: 6142 opt: 6142 Z-score: 6840.2 bits: 1277.4 E(85289): 0
Smith-Waterman score: 6527; 95.7% identity (95.7% similar) in 1023 aa overlap (159-1137:1-1023)
130 140 150 160 170 180
pF1KSD RSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRP
::::::::::::::::::::::::::::::
XP_005 MIGRCFVLSQDLAIRDELDGGEWKFCEGRP
10 20 30
190 200 210 220
pF1KSD QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKG------------------------
::::::::::::::::::::::::::::::::::::
XP_005 QGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDGPYEA
40 50 60 70 80 90
230 240 250 260
pF1KSD --------------------LLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLG
::::::::::::::::::::::::::::::::::::::::
XP_005 GGEKEQDPRLIPVPANSYFGLLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLG
100 110 120 130 140 150
270 280 290 300 310 320
pF1KSD FSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSL
160 170 180 190 200 210
330 340 350 360 370 380
pF1KSD AVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGIS
220 230 240 250 260 270
390 400 410 420 430 440
pF1KSD LAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLS
280 290 300 310 320 330
450 460 470 480 490 500
pF1KSD GSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVD
340 350 360 370 380 390
510 520 530 540 550 560
pF1KSD LRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLK
400 410 420 430 440 450
570 580 590 600 610 620
pF1KSD HQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPS
460 470 480 490 500 510
630 640 650 660 670 680
pF1KSD TQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPV
520 530 540 550 560 570
690 700 710 720 730 740
pF1KSD IGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENAS
580 590 600 610 620 630
750 760 770 780 790 800
pF1KSD HVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFIE
640 650 660 670 680 690
810 820 830 840 850 860
pF1KSD LPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIM
700 710 720 730 740 750
870 880 890 900 910 920
pF1KSD WPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEP
760 770 780 790 800 810
930 940 950 960 970 980
pF1KSD GERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTF
820 830 840 850 860 870
990 1000 1010 1020 1030 1040
pF1KSD LEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLA
880 890 900 910 920 930
1050 1060 1070 1080 1090 1100
pF1KSD VLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNW
940 950 960 970 980 990
1110 1120 1130
pF1KSD GSPRREGPDAHPILAADGHPELGPDGHPGPGTA
:::::::::::::::::::::::::::::::::
XP_005 GSPRREGPDAHPILAADGHPELGPDGHPGPGTA
1000 1010 1020
>>XP_016874754 (OMIM: 600536,613204) PREDICTED: integrin (1051 aa)
initn: 6142 init1: 6142 opt: 6142 Z-score: 6840.0 bits: 1277.4 E(85289): 0
Smith-Waterman score: 6663; 95.8% identity (95.8% similar) in 1043 aa overlap (139-1137:9-1051)
110 120 130 140 150 160
pF1KSD DQGADMQKESKENQWLGVSVRSQGPGGKIVTCAHRYEARQRVDQILETRDMIGRCFVLSQ
::::::::::::::::::::::::::::::
XP_016 MDLCNTGRTCAHRYEARQRVDQILETRDMIGRCFVLSQ
10 20 30
170 180 190 200 210 220
pF1KSD DLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKG----
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTYNWKGTARV
40 50 60 70 80 90
230 240
pF1KSD ----------------------------------------LLFVTNIDSSDPDQLVYKTL
::::::::::::::::::::
XP_016 ELCAQGSADLAHLDDGPYEAGGEKEQDPRLIPVPANSYFGLLFVTNIDSSDPDQLVYKTL
100 110 120 130 140 150
250 260 270 280 290 300
pF1KSD DPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEELSFVAGAPRANHKGAVVILRKDSASR
160 170 180 190 200 210
310 320 330 340 350 360
pF1KSD LVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGAPYFFERQEELGGAVYVYLNQGGH
220 230 240 250 260 270
370 380 390 400 410 420
pF1KSD WAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDIAVGAPFDGDGKVFIYHGSSLGVVAK
280 290 300 310 320 330
430 440 450 460 470 480
pF1KSD PSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLVGSLADTAVLFRARPILHVSHEVSIA
340 350 360 370 380 390
490 500 510 520 530 540
pF1KSD PRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYSPTVALDYVLDADTDRRLRGQVPRVT
400 410 420 430 440 450
550 560 570 580 590 600
pF1KSD FLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQENVKDKLRAIVVTLSYSLQTPRLRR
460 470 480 490 500 510
610 620 630 640 650 660
pF1KSD QAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQ
520 530 540 550 560 570
670 680 690 700 710 720
pF1KSD PLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPAQPQADGDDAHEAQLLVMLPDSLHYS
580 590 600 610 620 630
730 740 750 760 770 780
pF1KSD GVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVRALDPAEKPLCLSNENASHVECELGNPMKRGAQVTFYLILSTSGISIETTELEVELLL
640 650 660 670 680 690
790 800 810 820 830 840
pF1KSD ATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ATISEQELHPVSARARVFIELPLSIAGMAIPQQLFFSGVVRGERAMQSERDVGSKVKYEV
700 710 720 730 740 750
850 860 870 880 890 900
pF1KSD TVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPMQVELEGGQGPGQKGLCSPRPNILHL
760 770 780 790 800 810
910 920 930 940 950 960
pF1KSD DVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSSAEKKKNITLDCARGTANCVVFSCPL
820 830 840 850 860 870
970 980 990 1000 1010 1020
pF1KSD YSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVRANITVKSSIKNLMLRDASTVIPVMV
880 890 900 910 920 930
1030 1040 1050 1060 1070 1080
pF1KSD YLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIP
940 950 960 970 980 990
1090 1100 1110 1120 1130
pF1KSD REDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
:::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REDRQQFKEEKTGTILRNNWGSPRREGPDAHPILAADGHPELGPDGHPGPGTA
1000 1010 1020 1030 1040 1050
>>XP_005268901 (OMIM: 600536,613204) PREDICTED: integrin (1068 aa)
initn: 6142 init1: 6142 opt: 6142 Z-score: 6839.9 bits: 1277.4 E(85289): 0
Smith-Waterman score: 6832; 95.9% identity (95.9% similar) in 1068 aa overlap (114-1137:1-1068)
90 100 110 120 130 140
pF1KSD QANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKENQWLGVSVRSQGPGGKIVTCAHR
::::::::::::::::::::::::::::::
XP_005 MQKESKENQWLGVSVRSQGPGGKIVTCAHR
10 20 30
150 160 170 180 190 200
pF1KSD YEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAA
40 50 60 70 80 90
210 220
pF1KSD AFSPDSHYLLFGAPGTYNWKG---------------------------------------
:::::::::::::::::::::
XP_005 AFSPDSHYLLFGAPGTYNWKGTARVELCAQGSADLAHLDDGPYEAGGEKEQDPRLIPVPA
100 110 120 130 140 150
230 240 250 260 270
pF1KSD -----LLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEEL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSYFGLLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLGFSIDSGKGLVRAEEL
160 170 180 190 200 210
280 290 300 310 320 330
pF1KSD SFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SFVAGAPRANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIV
220 230 240 250 260 270
340 350 360 370 380 390
pF1KSD GAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GAPYFFERQEELGGAVYVYLNQGGHWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFPDI
280 290 300 310 320 330
400 410 420 430 440 450
pF1KSD AVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVGAPFDGDGKVFIYHGSSLGVVAKPSQVLEGEAVGIKSFGYSLSGSLDMDGNQYPDLLV
340 350 360 370 380 390
460 470 480 490 500 510
pF1KSD GSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSLADTAVLFRARPILHVSHEVSIAPRSIDLEQPNCAGGHSVCVDLRVCFSYIAVPSSYS
400 410 420 430 440 450
520 530 540 550 560 570
pF1KSD PTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PTVALDYVLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGDAMFQLQ
460 470 480 490 500 510
580 590 600 610 620 630
pF1KSD ENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVAPILNAHQPSTQRAEIHFLKQGCGE
520 530 540 550 560 570
640 650 660 670 680 690
pF1KSD DKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLPSDPA
580 590 600 610 620 630
700 710 720 730 740 750
pF1KSD QPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QPQADGDDAHEAQLLVMLPDSLHYSGVRALDPAEKPLCLSNENASHVECELGNPMKRGAQ
640 650 660 670 680 690
760 770 780 790 800 810
pF1KSD VTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VTFYLILSTSGISIETTELEVELLLATISEQELHPVSARARVFIELPLSIAGMAIPQQLF
700 710 720 730 740 750
820 830 840 850 860 870
pF1KSD FSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FSGVVRGERAMQSERDVGSKVKYEVTVSNQGQSLRTLGSAFLNIMWPHEIANGKWLLYPM
760 770 780 790 800 810
880 890 900 910 920 930
pF1KSD QVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QVELEGGQGPGQKGLCSPRPNILHLDVDSRDRRRRELEPPEQQEPGERQEPSMSWWPVSS
820 830 840 850 860 870
940 950 960 970 980 990
pF1KSD AEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AEKKKNITLDCARGTANCVVFSCPLYSFDRAAVLHVWGRLWNSTFLEEYSAVKSLEVIVR
880 890 900 910 920 930
1000 1010 1020 1030 1040 1050
pF1KSD ANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ANITVKSSIKNLMLRDASTVIPVMVYLDPMAVVAEGVPWWVILLAVLAGLLVLALLVLLL
940 950 960 970 980 990
1060 1070 1080 1090 1100 1110
pF1KSD WKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WKMGFFKRAKHPEATVPQYHAVKIPREDRQQFKEEKTGTILRNNWGSPRREGPDAHPILA
1000 1010 1020 1030 1040 1050
1120 1130
pF1KSD ADGHPELGPDGHPGPGTA
::::::::::::::::::
XP_005 ADGHPELGPDGHPGPGTA
1060
1137 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 08:25:19 2016 done: Thu Nov 3 08:25:21 2016
Total Scan time: 11.850 Total Display time: 0.480
Function used was FASTA [36.3.4 Apr, 2011]