##################################
# NO CUT ENZYMES ( 65 enzymes) #
##################################
Acc65I AccIII AclI AcsI AflII
AhdI ApoI AscI AseI AsnI
Asp718I AspEI AspI AvrII BamHI
BclI BfrI BlnI BsaI BseAI
BsiWI BspEI BspLU11I BsrDI Bst1107I
BstBI BstZ17I CpoI DraI DrdI
Eam1105I EcoRI EcoRV EcoT22I FbaI
FseI HpaI KpnI MfeI MroI
MunI NdeI NheI NotI NruI
NsiI NspV PacI PaeR7I PflFI
PmeI PshBI Psp1406I PvuI RsrII
SbfI SfuI SnaBI SpeI Sse8387I
SspI SwaI Tth111I XbaI XhoI
###################################
# ONE CUT ENZYMES ( 31 enzymes) #
###################################
AccI 4816 GTCGAC GT^[AC][GT]AC
AgeI 640 ACCGGT A^CCGGT
Aor51HI 5507 AGCGCT AGC^GCT
AviII 3077 TGCGCA TGC^GCA
BbrPI 2032 CACGTG CAC^GTG
BbvCI 3457 GCTGAGG CCTCAGC(-5/-2)
BciVI 5180 GTATCC GTATCC(6/5)
BfaI 580 CTAG C^TAG
BsmI 5559 GAATGC GAATGC(1/-1)
Bsp1407I 4505 TGTACA T^GTACA
BspDI 1828 ATCGAT AT^CGAT
BspHI 4385 TCATGA T^CATGA
BsrGI 4505 TGTACA T^GTACA
ClaI 1828 ATCGAT AT^CGAT
Eco47III 5507 AGCGCT AGC^GCT
EcoNI 5160 CCTGTTCAAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG
FspI 3077 TGCGCA TGC^GCA
HindIII 4903 AAGCTT A^AGCTT
MaeI 580 CTAG C^TAG
MseI 4907 TTAA T^TAA
PinAI 640 ACCGGT A^CCGGT
PmaCI 2032 CACGTG CAC^GTG
PmlI 2032 CACGTG CAC^GTG
RcaI 4385 TCATGA T^CATGA
SacI 3031 GAGCTC GAGCT^C
SalI 4816 GTCGAC G^TCGAC
SexAI 2426 ACCAGGT A^CC[AT]GGT
SfiI 270 GGCCGAGGCGGCC GGCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGCC
SgrAI 978 CGCCGGCG C[GA]^CCGG[CT]G
SspBI 4505 TGTACA T^GTACA
Tru9I 4907 TTAA T^TAA
###################################
# TWO CUT ENZYMES ( 12 enzymes) #
###################################
AatII 1608 GACGTC GACGT^C
4813 GACGTC
AocI 2245 CCTCAGG CC^T[ACGT]AGG
3109 CCTGAGG
Asp700I 5013 GAAGTATTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC
5595 GAATGAGTTC
BcgI 3968 GCAAAGGCTTCG (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10)
5073 GCAGAGCCATCG
BstAPI 1211 GCACCGCCTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC
3092 GCATCGCCTGC
Bsu36I 2245 CCTCAGG CC^T[ACGT]AGG
3109 CCTGAGG
Eco81I 2245 CCTCAGG CC^T[ACGT]AGG
3109 CCTGAGG
MluI 563 ACGCGT A^CGCGT
887 ACGCGT
PshAI 2590 GACCTGGGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC
4740 GACACAGGTC
ScaI 4370 AGTACT AGT^ACT
5213 AGTACT
SphI 533 GCATGC GCATG^C
1505 GCATGC
XmnI 5013 GAAGTATTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC
5595 GAATGAGTTC
#########################################
# 3 OR MORE CUT ENZYMES ( 150 enzymes) #
#########################################
AccII AciI AcyI AfaI AflIII
AluI Alw44I AlwI AlwNI ApaI
ApaLI AspHI AvaI AvaII BalI
BanI BanII BbeI BbsI BbvI
BcnI BglI BglII BlpI BmyI
BpmI Bpu1102I BpuAI BsaAI BsaBI
BsaHI BsaJI BsaWI BseRI BsgI
BsiEI BsiHKAI BsiYI BslI BsmAI
BsmBI BsmFI BsoBI Bsp1286I BspMI
BsrBI BsrFI BsrI BssHII BssKI
BssSI BstEII BstF5I BstNI BstPI
BstUI BstXI BstYI Cac8I CelII
CfoI Cfr10I Cfr13I DdeI DpnII
DraII DraIII DsaI EaeI EagI
EarI EclXI Eco52I EcoO109I EcoO65I
EcoRII EcoT14I FauI Fnu4HI FokI
HaeII HaeIII HapII HgaI HhaI
Hin1I HinP1I HincII HindII HinfI
HpaII HphI ItaI KasI Ksp632I
KspI MaeII MaeIII MamI MboI
MboII MflI MluNI MnlI MscI
MslI MspA1I MspI MvaI MvnI
MwoI NaeI NarI NciI NcoI
NdeII NgoMIV NlaIII NlaIV NspI
PflMI PleI PpuMI PstI PvuII
RsaI SacII SapI Sau3AI Sau96I
ScrFI SfaNI SfcI SfoI SmaI
SmlI StuI StyI TaqI TfiI
TseI Tsp45I Tsp509I TspRI TthHB8I
Van91I XcmI XhoII XmaCI XmaI