################################## # NO CUT ENZYMES ( 90 enzymes) # ################################## AatII Acc65I AccIII AclI AcsI AcyI AflII AhdI Alw44I ApaI ApaLI ApoI AscI AseI AsnI Asp718I AspEI AviII AvrII BamHI BbeI BbvCI BfrI BglII BlnI BsaBI BsaHI BseAI BsiWI BsmI BspDI BspEI BspLU11I BspMI BsrDI BssHII BssSI Bst1107I BstBI BstXI BstZ17I ClaI CpoI DraI DraIII EagI Eam1105I EclXI Eco52I EcoNI EcoRI FseI FspI Hin1I KasI KpnI KspI MamI MluI MroI NaeI NarI NdeI NgoMIV NotI NruI NspV PaeR7I PmeI PshAI PshBI Psp1406I PvuI RsrII SacII SapI SbfI ScaI SexAI SfoI SfuI SgrAI SnaBI SpeI SphI Sse8387I StuI SwaI XbaI XhoI ################################### # ONE CUT ENZYMES ( 50 enzymes) # ################################### AccII 1539 CGCG CG^CG AgeI 2309 ACCGGT A^CCGGT AocI 1926 CCTGAGG CC^T[ACGT]AGG Aor51HI 938 AGCGCT AGC^GCT BbrPI 631 CACGTG CAC^GTG BcgI 1509 CGAATCCCTTGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BciVI 813 GGATAC GTATCC(6/5) BlpI 1701 GCTGAGC GC^T[ACGT]AGC Bpu1102I 1701 GCTGAGC GC^T[ACGT]AGC BsgI 335 GTGCAG GTGCAG(16/14) BsmBI 1161 CGTCTC CGTCTC(1/5) Bsp1407I 735 TGTACA T^GTACA BspHI 557 TCATGA T^CATGA BsrBI 1309 CCGCTC CCGCTC(-3/-3) BsrGI 735 TGTACA T^GTACA BstAPI 239 GCAAATACTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC BstUI 1539 CGCG CG^CG Bsu36I 1926 CCTGAGG CC^T[ACGT]AGG CelII 1701 GCTGAGC GC^T[ACGT]AGC CfoI 939 GCGC GCG^C DrdI 1143 GACCAGCGGGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC Eco47III 938 AGCGCT AGC^GCT Eco81I 1926 CCTGAGG CC^T[ACGT]AGG EcoRV 1472 GATATC GAT^ATC EcoT22I 30 ATGCAT ATGCA^T HaeII 938 AGCGCT [GA]GCGC^[CT] HhaI 939 GCGC GCG^C HinP1I 939 GCGC G^CGC HindIII 1744 AAGCTT A^AGCTT HpaI 1863 GTTAAC GTT^AAC MfeI 1895 CAATTG C^AATTG MunI 1895 CAATTG C^AATTG MvnI 1539 CGCG CG^CG NheI 4 GCTAGC G^CTAGC NsiI 30 ATGCAT ATGCA^T PacI 427 TTAATTAA TTAAT^TAA PinAI 2309 ACCGGT A^CCGGT PmaCI 631 CACGTG CAC^GTG PmlI 631 CACGTG CAC^GTG PstI 2492 CTGCAG CTGCA^G RcaI 557 TCATGA T^CATGA SacI 697 GAGCTC GAGCT^C SalI 289 GTCGAC G^TCGAC SfcI 2492 CTGCAG C^T[GA][CT]AG SfiI 1533 GGCCATCGCGGCC GGCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGCC SmaI 400 CCCGGG CCC^GGG SspBI 735 TGTACA T^GTACA SspI 2186 AATATT AAT^ATT XmaCI 400 CCCGGG C^CCGGG XmaI 400 CCCGGG C^CCGGG ################################### # TWO CUT ENZYMES ( 29 enzymes) # ################################### AccI 79 GTAGAC GT^[AC][GT]AC 289 GTCGAC AflIII 329 ACGTGT A^C[GA][CT]GT 720 ACACGT AlwNI 918 CAGAATCTG CAG[ACGT][ACGT][ACGT]^CTG 2495 CAGAGGCTG AspI 1550 GACACGGTC GAC[ACGT]^[ACGT][ACGT]GTC 2482 GACTGCGTC BbsI 1335 GAAGAC GAAGAC(2/6) 1633 GAAGAC BclI 830 TGATCA T^GATCA 2103 TGATCA BfaI 5 CTAG C^TAG 1121 CTAG BpuAI 1335 GAAGAC GAAGAC(2/6) 1633 GAAGAC BsaI 1218 GAGACC GGTCTC(1/5) 1693 GAGACC BsaWI 1852 TCCGGT [AT]^CCGG[AT] 2309 ACCGGT BsiEI 1554 CGGTCG CG[GA][CT]^CG 2390 CGGTCG BsrFI 1409 ACCGGC [GA]^CCGG[CT] 2309 ACCGGT BstEII 1140 GGTGACC G^GT[ACGT]ACC 2235 GGTGACC BstPI 1140 GGTGACC G^GT[ACGT]ACC 2235 GGTGACC Cfr10I 1409 ACCGGC [GA]^CCGG[CT] 2309 ACCGGT DraII 770 AGGTCCC [GA]G^G[ACGT]CC[CT] 2195 AGGACCC EcoO109I 770 AGGTCCC [GA]G^G[ACGT]CC[CT] 2195 AGGACCC EcoO65I 1140 GGTGACC G^GT[ACGT]ACC 2235 GGTGACC FbaI 830 TGATCA T^GATCA 2103 TGATCA MaeI 5 CTAG C^TAG 1121 CTAG NspI 285 GCATGT [GA]CATG^[CT] 293 ACATGC PflFI 1550 GACACGGTC GAC[ACGT]^[ACGT][ACGT]GTC 2482 GACTGCGTC PflMI 1803 CCAAGATGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 2088 CCAGCCCATGG PpuMI 770 AGGTCCC [GA]G^G[AT]CC[CT] 2195 AGGACCC SmlI 678 CTCAAG C^T[CT][GA]AG 1360 CTCAAG Tsp509I 429 AATT ^AATT 1896 AATT Tth111I 1550 GACACGGTC GAC[ACGT]^[ACGT][ACGT]GTC 2482 GACTGCGTC Van91I 1803 CCAAGATGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 2088 CCAGCCCATGG XcmI 1520 CCAAAGACCAGTTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG 1988 CCAAGACTGGCCTGG ######################################### # 3 OR MORE CUT ENZYMES ( 89 enzymes) # ######################################### AciI AfaI AluI AlwI Asp700I AspHI AvaI AvaII BalI BanI BanII BbvI BcnI BglI BmyI BpmI BsaAI BsaJI BseRI BsiHKAI BsiYI BslI BsmAI BsmFI BsoBI Bsp1286I BsrI BssKI BstF5I BstNI BstYI Cac8I Cfr13I DdeI DpnII DsaI EaeI EarI EcoRII EcoT14I FauI Fnu4HI FokI HaeIII HapII HgaI HincII HindII HinfI HpaII HphI ItaI Ksp632I MaeII MaeIII MboI MboII MflI MluNI MnlI MscI MseI MslI MspA1I MspI MvaI MwoI NciI NcoI NdeII NlaIII NlaIV PleI PvuII RsaI Sau3AI Sau96I ScrFI SfaNI StyI TaqI TfiI Tru9I TseI Tsp45I TspRI TthHB8I XhoII XmnI