################################## # NO CUT ENZYMES ( 93 enzymes) # ################################## AatII AccII AccIII AcyI AgeI AhdI Alw44I AlwNI AocI Aor51HI ApaI ApaLI AscI AspEI AvaI AviII BanII BbeI BbrPI BbvCI BcgI BglI BlpI Bpu1102I BsaAI BsaHI BsaI BsaWI BseAI BsiEI BsiWI BsoBI BspDI BspEI BsrBI BsrFI BssHII BssSI BstBI BstUI Bsu36I CelII Cfr10I ClaI CpoI EagI Eam1105I EclXI Eco47III Eco52I Eco81I FseI FspI HaeII Hin1I HpaI KasI KspI MluI MroI MvnI NaeI NarI NgoMIV NotI NruI NspV PacI PaeR7I PinAI PmaCI PmeI PmlI PshAI PvuI RsrII SacI SacII SalI SapI SexAI SfiI SfoI SfuI SgrAI SmaI SnaBI SphI StuI SwaI XhoI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 42 enzymes) # ################################### Acc65I 2239 GGTACC G^GTACC AclI 206 AACGTT AA^CGTT AflII 79 CTTAAG C^TTAAG Asp718I 2239 GGTACC G^GTACC AspHI 563 GAGCAC G[AT]GC[AT]^C AvrII 4704 CCTAGG C^CTAGG BamHI 3930 GGATCC G^GATCC BciVI 2077 GTATCC GTATCC(6/5) BfrI 79 CTTAAG C^TTAAG BlnI 4704 CCTAGG C^CTAGG BseRI 3973 GAGGAG GAGGAG(10/8) BsiHKAI 563 GAGCAC G[AT]GC[AT]^C BsmBI 3558 GAGACG CGTCTC(1/5) BsmI 3244 GCATTC GAATGC(1/-1) Bsp1407I 1990 TGTACA T^GTACA BspMI 4400 GCAGGT ACCTGC(4/8) BsrGI 1990 TGTACA T^GTACA Bst1107I 3843 GTATAC GTA^TAC BstZ17I 3843 GTATAC GTA^TAC DraIII 2819 CACAGTGTG CAC[ACGT][ACGT][ACGT]^GTG DrdI 901 GACAGATTTGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EcoNI 553 CCTGAAACAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG EcoRI 687 GAATTC G^AATTC FauI 1906 CCCGC CCCGC(4/6) HgaI 4566 GCGTC GACGC(5/10) HincII 2740 GTTGAC GT[CT]^[GA]AC HindII 2740 GTTGAC GT[CT]^[GA]AC KpnI 2239 GGTACC GGTAC^C MfeI 478 CAATTG C^AATTG MspA1I 1479 CAGCTG C[AC]G^C[GT]G MunI 478 CAATTG C^AATTG NheI 1039 GCTAGC G^CTAGC PflMI 2227 CCAGGCTGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG Psp1406I 206 AACGTT AA^CGTT PvuII 1479 CAGCTG CAG^CTG SbfI 138 CCTGCAGG CCTGCA^GG ScaI 4484 AGTACT AGT^ACT SpeI 2851 ACTAGT A^CTAGT Sse8387I 138 CCTGCAGG CCTGCA^GG SspBI 1990 TGTACA T^GTACA Van91I 2227 CCAGGCTGTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG XcmI 3671 CCAAAAAACATATGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG ################################### # TWO CUT ENZYMES ( 38 enzymes) # ################################### AciI 1907 CCGC CCGC(-3/-1) 3466 GCGG AflIII 1436 ACATGT A^C[GA][CT]GT 3569 ACATGT AseI 85 ATTAAT AT^TAAT 3171 ATTAAT AsnI 85 ATTAAT AT^TAAT 3171 ATTAAT AspI 1881 GACTCGGTC GAC[ACGT]^[ACGT][ACGT]GTC 4253 GACTAAGTC BcnI 259 CCGGG CC^[GC]GG 2525 CCCGG BglII 1773 AGATCT A^GATCT 3786 AGATCT BmyI 563 GAGCAC G[AGT]GC[ACT]^C 3314 GGGCAC BpmI 3967 CTCCAG CTGGAG(16/14) 2029 CTGGAG BsaBI 358 GATTATGATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC 668 GATTTGCATC Bsp1286I 563 GAGCAC G[AGT]GC[ACT]^C 3314 GGGCAC BspLU11I 1436 ACATGT A^CATGT 3569 ACATGT BsrDI 653 GCAATG GCAATG(2/0) 1162 GCAATG BstAPI 102 GCAAATTCTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC 2323 GCAGAAATTGC BstEII 2352 GGTCACC G^GT[ACGT]ACC 3539 GGTCACC BstPI 2352 GGTCACC G^GT[ACGT]ACC 3539 GGTCACC BstXI 623 CCACGGAAGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1540 CCACATTTATGG CfoI 3129 GCGC GCG^C 4392 GCGC EcoO65I 2352 GGTCACC G^GT[ACGT]ACC 3539 GGTCACC EcoRV 382 GATATC GAT^ATC 1051 GATATC EcoT22I 2254 ATGCAT ATGCA^T 3242 ATGCAT HapII 259 CCGG C^CGG 2526 CCGG HhaI 3129 GCGC GCG^C 4392 GCGC HinP1I 3129 GCGC G^CGC 4392 GCGC HpaII 259 CCGG C^CGG 2526 CCGG MaeII 207 ACGT A^CGT 3318 ACGT MamI 358 GATTATGATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC 668 GATTTGCATC MspI 259 CCGG C^CGG 2526 CCGG NciI 259 CCGGG CC^[GC]GG 2525 CCCGG NdeI 3679 CATATG CA^TATG 4733 CATATG NsiI 2254 ATGCAT ATGCA^T 3242 ATGCAT PflFI 1881 GACTCGGTC GAC[ACGT]^[ACGT][ACGT]GTC 4253 GACTAAGTC PpuMI 158 AGGACCT [GA]G^G[AT]CC[CT] 4272 AGGTCCT PshBI 85 ATTAAT AT^TAAT 3171 ATTAAT TaqI 2006 TCGA T^CGA 2064 TCGA Tth111I 1881 GACTCGGTC GAC[ACGT]^[ACGT][ACGT]GTC 4253 GACTAAGTC TthHB8I 2006 TCGA T^CGA 2064 TCGA XbaI 1126 TCTAGA T^CTAGA 1533 TCTAGA ######################################### # 3 OR MORE CUT ENZYMES ( 85 enzymes) # ######################################### AccI AcsI AfaI AluI AlwI ApoI Asp700I AvaII BalI BanI BbsI BbvI BclI BfaI BpuAI BsaJI BsgI BsiYI BslI BsmAI BsmFI BspHI BsrI BssKI BstF5I BstNI BstYI Cac8I Cfr13I DdeI DpnII DraI DraII DsaI EaeI EarI EcoO109I EcoRII EcoT14I FbaI Fnu4HI FokI HaeIII HindIII HinfI HphI ItaI Ksp632I MaeI MaeIII MboI MboII MflI MluNI MnlI MscI MseI MslI MvaI MwoI NcoI NdeII NlaIII NlaIV NspI PleI PstI RcaI RsaI Sau3AI Sau96I ScrFI SfaNI SfcI SmlI SspI StyI TfiI Tru9I TseI Tsp45I Tsp509I TspRI XhoII XmnI