################################## # NO CUT ENZYMES ( 87 enzymes) # ################################## AatII AccIII AcyI AflII AgeI AhdI Alw44I Aor51HI ApaLI AscI AseI AsnI AspEI AvaI AviII BbeI BbrPI BbvCI BcnI BfrI BglI BsaHI BseAI BsiEI BsiWI BsoBI BspDI BspEI BspLU11I BsrBI BssHII BssSI BstBI ClaI CpoI DrdI EagI Eam1105I EclXI Eco47III Eco52I EcoNI FauI FseI FspI Hin1I KasI KspI MluI MroI MspA1I NaeI NarI NciI NdeI NgoMIV NheI NotI NruI NspV PaeR7I PinAI PmaCI PmeI PmlI PshAI PshBI PvuI PvuII RsrII SacII SalI SapI SbfI SexAI SfiI SfoI SfuI SgrAI SmaI SnaBI SpeI Sse8387I SwaI XhoI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 56 enzymes) # ################################### AccI 3045 GTATAC GT^[AC][GT]AC AccII 3462 CGCG CG^CG AclI 3514 AACGTT AA^CGTT AflIII 3786 ACGTGT A^C[GA][CT]GT ApaI 3921 GGGCCC GGGCC^C AspI 2278 GACCCAGTC GAC[ACGT]^[ACGT][ACGT]GTC AvrII 592 CCTAGG C^CTAGG BalI 3834 TGGCCA TGG^CCA BamHI 333 GGATCC G^GATCC BbsI 28 GAAGAC GAAGAC(2/6) BciVI 3334 GGATAC GTATCC(6/5) BlnI 592 CCTAGG C^CTAGG BlpI 2152 GCTCAGC GC^T[ACGT]AGC Bpu1102I 2152 GCTCAGC GC^T[ACGT]AGC BpuAI 28 GAAGAC GAAGAC(2/6) BsaAI 3785 TACGTG [CT]AC^GT[GA] BsaI 455 GAGACC GGTCTC(1/5) BseRI 667 GAGGAG GAGGAG(10/8) BsgI 2692 GTGCAG GTGCAG(16/14) Bsp1407I 3219 TGTACA T^GTACA BspHI 3011 TCATGA T^CATGA BspMI 1027 GCAGGT ACCTGC(4/8) BsrFI 3885 GCCGGT [GA]^CCGG[CT] BsrGI 3219 TGTACA T^GTACA Bst1107I 3045 GTATAC GTA^TAC BstEII 1309 GGTGACC G^GT[ACGT]ACC BstPI 1309 GGTGACC G^GT[ACGT]ACC BstUI 3462 CGCG CG^CG BstZ17I 3045 GTATAC GTA^TAC CelII 2152 GCTCAGC GC^T[ACGT]AGC Cfr10I 3885 GCCGGT [GA]^CCGG[CT] DraIII 2686 CACTTTGTG CAC[ACGT][ACGT][ACGT]^GTG EaeI 3834 TGGCCA [CT]^GGCC[GA] EcoO65I 1309 GGTGACC G^GT[ACGT]ACC EcoRV 2674 GATATC GAT^ATC HgaI 3460 GACGC GACGC(5/10) HindIII 3716 AAGCTT A^AGCTT HpaI 370 GTTAAC GTT^AAC MfeI 3663 CAATTG C^AATTG MluNI 3834 TGGCCA TGG^CCA MscI 3834 TGGCCA TGG^CCA MunI 3663 CAATTG C^AATTG MvnI 3462 CGCG CG^CG PacI 37 TTAATTAA TTAAT^TAA PflFI 2278 GACCCAGTC GAC[ACGT]^[ACGT][ACGT]GTC PpuMI 566 AGGACCT [GA]G^G[AT]CC[CT] Psp1406I 3514 AACGTT AA^CGTT RcaI 3011 TCATGA T^CATGA ScaI 2832 AGTACT AGT^ACT SphI 2604 GCATGC GCATG^C SspBI 3219 TGTACA T^GTACA SspI 1246 AATATT AAT^ATT StuI 2072 AGGCCT AGG^CCT Tth111I 2278 GACCCAGTC GAC[ACGT]^[ACGT][ACGT]GTC XbaI 1032 TCTAGA T^CTAGA XcmI 510 CCAGGGAACAGATGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG ################################### # TWO CUT ENZYMES ( 35 enzymes) # ################################### Acc65I 1782 GGTACC G^GTACC 2112 GGTACC AciI 3457 GCGG CCGC(-3/-1) 3463 GCGG AocI 976 CCTGAGG CC^T[ACGT]AGG 2075 CCTCAGG Asp718I 1782 GGTACC G^GTACC 2112 GGTACC AvaII 567 GGACC G^G[AT]CC 3375 GGTCC BcgI 2694 GCAGCTTTATCG (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) 3521 GCAAGGGTGTCG BclI 63 TGATCA T^GATCA 270 TGATCA BsaBI 1702 GATAATGATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC 2862 GATTCTTATC BsmBI 2317 GAGACG CGTCTC(1/5) 2995 GAGACG BsmFI 2739 GGGAC GGGAC(10/14) 3780 GGGAC BsrDI 2377 GCAATG GCAATG(2/0) 3830 GCAATG BstAPI 3172 GCAGGAGGTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC 3411 GCAGGCACTGC BstXI 2102 CCACTGTGATGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 3350 CCAGTATTGTGG Bsu36I 976 CCTGAGG CC^T[ACGT]AGG 2075 CCTCAGG CfoI 3314 GCGC GCG^C 3875 GCGC EarI 3327 CTCTTC CTCTTC(1/4) 2452 GAAGAG Eco81I 976 CCTGAGG CC^T[ACGT]AGG 2075 CCTCAGG EcoRI 315 GAATTC G^AATTC 847 GAATTC EcoT22I 154 ATGCAT ATGCA^T 2602 ATGCAT FbaI 63 TGATCA T^GATCA 270 TGATCA HaeII 3313 GGCGCT [GA]GCGC^[CT] 3874 AGCGCC HhaI 3314 GCGC GCG^C 3875 GCGC HinP1I 3314 GCGC G^CGC 3875 GCGC HincII 370 GTTAAC GT[CT]^[GA]AC 903 GTTGAC HindII 370 GTTAAC GT[CT]^[GA]AC 903 GTTGAC KpnI 1782 GGTACC GGTAC^C 2112 GGTACC Ksp632I 3327 CTCTTC CTCTTC(1/4) 2452 GAAGAG MaeII 3515 ACGT A^CGT 3786 ACGT MamI 1702 GATAATGATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC 2862 GATTCTTATC NsiI 154 ATGCAT ATGCA^T 2602 ATGCAT PflMI 2983 CCATTGTTTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 3492 CCAGTGGGTGG SacI 2081 GAGCTC GAGCT^C 2088 GAGCTC TaqI 1619 TCGA T^CGA 2940 TCGA TthHB8I 1619 TCGA T^CGA 2940 TCGA Van91I 2983 CCATTGTTTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 3492 CCAGTGGGTGG ######################################### # 3 OR MORE CUT ENZYMES ( 80 enzymes) # ######################################### AcsI AfaI AluI AlwI AlwNI ApoI Asp700I AspHI BanI BanII BbvI BfaI BglII BmyI BpmI BsaJI BsaWI BsiHKAI BsiYI BslI BsmAI BsmI Bsp1286I BsrI BssKI BstF5I BstNI BstYI Cac8I Cfr13I DdeI DpnII DraI DraII DsaI EcoO109I EcoRII EcoT14I Fnu4HI FokI HaeIII HapII HinfI HpaII HphI ItaI MaeI MaeIII MboI MboII MflI MnlI MseI MslI MspI MvaI MwoI NcoI NdeII NlaIII NlaIV NspI PleI PstI RsaI Sau3AI Sau96I ScrFI SfaNI SfcI SmlI StyI TfiI Tru9I TseI Tsp45I Tsp509I TspRI XhoII XmnI