################################## # NO CUT ENZYMES ( 73 enzymes) # ################################## AatII Acc65I AccI AclI AgeI ApaI AscI AseI AsnI Asp718I AvaI BciVI BsaBI BsiEI BsiWI BsmI BsoBI Bsp1407I BspDI BsrBI BsrGI BssHII Bst1107I BstEII BstPI BstZ17I ClaI CpoI DrdI EagI EclXI Eco52I EcoO65I EcoRI EcoRV FseI KpnI MamI MfeI MluI MunI NaeI NcoI NdeI NgoMIV NheI NotI NruI PacI PaeR7I PinAI PmeI PshAI PshBI Psp1406I PvuI RsrII SalI SbfI ScaI SexAI SfiI SmaI SnaBI SpeI Sse8387I SspBI SspI StuI SwaI XhoI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 55 enzymes) # ################################### AcsI 775 GAATTT [GA]^AATT[CT] AfaI 2672 GTAC GT^AC AflII 336 CTTAAG C^TTAAG Alw44I 2130 GTGCAC G^TGCAC ApaLI 2130 GTGCAC G^TGCAC ApoI 775 GAATTT [GA]^AATT[CT] AspI 2469 GACTGAGTC GAC[ACGT]^[ACGT][ACGT]GTC AviII 2630 TGCGCA TGC^GCA AvrII 2574 CCTAGG C^CTAGG BalI 1236 TGGCCA TGG^CCA BbeI 3320 GGCGCC GGCGC^C BbrPI 2530 CACGTG CAC^GTG BbsI 3130 GTCTTC GAAGAC(2/6) BbvCI 3544 CCTCAGC CCTCAGC(-5/-2) BcgI 2035 GCAGCCCTGTCG (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BfrI 336 CTTAAG C^TTAAG BglII 2380 AGATCT A^GATCT BlnI 2574 CCTAGG C^CTAGG BpuAI 3130 GTCTTC GAAGAC(2/6) BsaAI 2530 CACGTG [CT]AC^GT[GA] BsmBI 1958 GAGACG CGTCTC(1/5) BspLU11I 894 ACATGT A^CATGT BsrDI 632 GCAATG GCAATG(2/0) BsrFI 2770 GCCGGT [GA]^CCGG[CT] BssSI 396 CTCGTG CACGAG(-5/-1) BstBI 3398 TTCGAA TT^CGAA BstXI 1975 CCAGCTGTATGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG Cfr10I 2770 GCCGGT [GA]^CCGG[CT] DraI 462 TTTAAA TTT^AAA DraII 160 GGGACCT [GA]G^G[ACGT]CC[CT] EaeI 1236 TGGCCA [CT]^GGCC[GA] EcoO109I 160 GGGACCT [GA]G^G[ACGT]CC[CT] EcoT22I 208 ATGCAT ATGCA^T FspI 2630 TGCGCA TGC^GCA HpaI 1557 GTTAAC GTT^AAC KasI 3320 GGCGCC G^GCGCC KspI 3565 CCGCGG CCGC^GG MluNI 1236 TGGCCA TGG^CCA MscI 1236 TGGCCA TGG^CCA NarI 3320 GGCGCC GG^CGCC NsiI 208 ATGCAT ATGCA^T NspV 3398 TTCGAA TT^CGAA PflFI 2469 GACTGAGTC GAC[ACGT]^[ACGT][ACGT]GTC PflMI 220 CCACTAATTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG PmaCI 2530 CACGTG CAC^GTG PmlI 2530 CACGTG CAC^GTG PpuMI 160 GGGACCT [GA]G^G[AT]CC[CT] RsaI 2672 GTAC GT^AC SacII 3565 CCGCGG CCGC^GG SfoI 3320 GGCGCC GGC^GCC SfuI 3398 TTCGAA TT^CGAA SgrAI 2769 CGCCGGTG C[GA]^CCGG[CT]G Tth111I 2469 GACTGAGTC GAC[ACGT]^[ACGT][ACGT]GTC Van91I 220 CCACTAATTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG XbaI 999 TCTAGA T^CTAGA ################################### # TWO CUT ENZYMES ( 27 enzymes) # ################################### AccIII 1289 TCCGGA T^CCGGA 1966 TCCGGA AflIII 623 ACGTGT A^C[GA][CT]GT 894 ACATGT AhdI 140 GACGCCAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC 2596 GACAGCCTGTC AlwNI 2745 CAGCTTCTG CAG[ACGT][ACGT][ACGT]^CTG 3205 CAGCACCTG AocI 477 CCTAAGG CC^T[ACGT]AGG 855 CCTTAGG AspEI 140 GACGCCAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC 2596 GACAGCCTGTC BglI 1329 GCCTGAAAGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC 2770 GCCGGTGGGGC BlpI 2763 GCTCAGC GC^T[ACGT]AGC 3430 GCTCAGC Bpu1102I 2763 GCTCAGC GC^T[ACGT]AGC 3430 GCTCAGC BsaI 850 GAGACC GGTCTC(1/5) 2096 GAGACC BseAI 1289 TCCGGA T^CCGGA 1966 TCCGGA BsgI 2533 GTGCAG GTGCAG(16/14) 2722 GTGCAG BspEI 1289 TCCGGA T^CCGGA 1966 TCCGGA Bsu36I 477 CCTAAGG CC^T[ACGT]AGG 855 CCTTAGG CelII 2763 GCTCAGC GC^T[ACGT]AGC 3430 GCTCAGC DraIII 1720 CACACCGTG CAC[ACGT][ACGT][ACGT]^GTG 3364 CACAATGTG DsaI 2618 CCGTGG C^C[GA][CT]GG 3565 CCGCGG Eam1105I 140 GACGCCAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC 2596 GACAGCCTGTC Eco81I 477 CCTAAGG CC^T[ACGT]AGG 855 CCTTAGG EcoNI 1948 CCTTCTACAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG 3210 CCTGCTTCAGG HincII 1557 GTTAAC GT[CT]^[GA]AC 2937 GTCAAC HindII 1557 GTTAAC GT[CT]^[GA]AC 2937 GTCAAC MroI 1289 TCCGGA T^CCGGA 1966 TCCGGA MslI 2205 CATTGTCATG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG 2506 CATCCCAGTG SapI 2155 GAAGAGC GCTCTTC(1/4) 2404 GAAGAGC SmlI 336 CTTAAG C^T[CT][GA]AG 1387 CTTGAG SphI 1715 GCATGC GCATG^C 3011 GCATGC ######################################### # 3 OR MORE CUT ENZYMES ( 103 enzymes) # ######################################### AccII AciI AcyI AluI AlwI Aor51HI Asp700I AspHI AvaII BamHI BanI BanII BbvI BclI BcnI BfaI BmyI BpmI BsaHI BsaJI BsaWI BseRI BsiHKAI BsiYI BslI BsmAI BsmFI Bsp1286I BspHI BspMI BsrI BssKI BstAPI BstF5I BstNI BstUI BstYI Cac8I CfoI Cfr13I DdeI DpnII EarI Eco47III EcoRII EcoT14I FauI FbaI Fnu4HI FokI HaeII HaeIII HapII HgaI HhaI Hin1I HinP1I HindIII HinfI HpaII HphI ItaI Ksp632I MaeI MaeII MaeIII MboI MboII MflI MnlI MseI MspA1I MspI MvaI MvnI MwoI NciI NdeII NlaIII NlaIV NspI PleI PstI PvuII RcaI SacI Sau3AI Sau96I ScrFI SfaNI SfcI StyI TaqI TfiI Tru9I TseI Tsp45I Tsp509I TspRI TthHB8I XcmI XhoII XmnI