################################## # NO CUT ENZYMES ( 61 enzymes) # ################################## AatII Acc65I AclI AflII AgeI ApaI AscI AseI AsnI Asp718I AspI AviII BbvCI BciVI BfrI BsiWI BspDI BssSI Bst1107I BstBI BstEII BstPI BstZ17I ClaI CpoI EcoO65I FseI FspI HpaI KpnI MfeI MluI MunI NdeI NheI NotI NruI NspV PacI PaeR7I PflFI PinAI PmeI PshBI Psp1406I PvuI RsrII SalI SbfI SfiI SfuI SnaBI SpeI SphI Sse8387I SspI StuI SwaI Tth111I XbaI XhoI ################################### # ONE CUT ENZYMES ( 51 enzymes) # ################################### AccI 1336 GTCTAC GT^[AC][GT]AC AccIII 458 TCCGGA T^CCGGA AhdI 2441 GACACAACGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AocI 1381 CCTGAGG CC^T[ACGT]AGG Aor51HI 255 AGCGCT AGC^GCT Asp700I 1467 GAAGACTTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC AspEI 2441 GACACAACGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AvrII 157 CCTAGG C^CTAGG BamHI 3120 GGATCC G^GATCC BcgI 2726 CGACGGCAGTGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BfaI 158 CTAG C^TAG BlnI 157 CCTAGG C^CTAGG BlpI 39 GCTGAGC GC^T[ACGT]AGC Bpu1102I 39 GCTGAGC GC^T[ACGT]AGC BsaBI 1255 GATGAGAATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC BseAI 458 TCCGGA T^CCGGA BsmBI 324 GAGACG CGTCTC(1/5) Bsp1407I 1057 TGTACA T^GTACA BspEI 458 TCCGGA T^CCGGA BspLU11I 2652 ACATGT A^CATGT BsrGI 1057 TGTACA T^GTACA BssHII 44 GCGCGC G^CGCGC Bsu36I 1381 CCTGAGG CC^T[ACGT]AGG CelII 39 GCTGAGC GC^T[ACGT]AGC DraI 3364 TTTAAA TTT^AAA DraIII 1328 CACGTGGTG CAC[ACGT][ACGT][ACGT]^GTG DrdI 2632 GACAGCGCCGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EagI 315 CGGCCG C^GGCCG Eam1105I 2441 GACACAACGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EclXI 315 CGGCCG C^GGCCG Eco47III 255 AGCGCT AGC^GCT Eco52I 315 CGGCCG C^GGCCG Eco81I 1381 CCTGAGG CC^T[ACGT]AGG EcoRI 2923 GAATTC G^AATTC EcoRV 3165 GATATC GAT^ATC KspI 2389 CCGCGG CCGC^GG MaeI 158 CTAG C^TAG MamI 1255 GATGAGAATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC MroI 458 TCCGGA T^CCGGA PflMI 522 CCAAGCCATGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG PstI 1510 CTGCAG CTGCA^G SacI 612 GAGCTC GAGCT^C SacII 2389 CCGCGG CCGC^GG SapI 1750 GAAGAGC GCTCTTC(1/4) ScaI 2296 AGTACT AGT^ACT SexAI 3411 ACCTGGT A^CC[AT]GGT SmlI 1000 CTTGAG C^T[CT][GA]AG SspBI 1057 TGTACA T^GTACA Van91I 522 CCAAGCCATGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG XcmI 2499 CCAAGTGGACTTTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XmnI 1467 GAAGACTTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC ################################### # TWO CUT ENZYMES ( 39 enzymes) # ################################### AcsI 901 GAATTT [GA]^AATT[CT] 2923 GAATTC Alw44I 1546 GTGCAC G^TGCAC 2677 GTGCAC ApaLI 1546 GTGCAC G^TGCAC 2677 GTGCAC ApoI 901 GAATTT [GA]^AATT[CT] 2923 GAATTC BalI 543 TGGCCA TGG^CCA 2217 TGGCCA BbeI 13 GGCGCC GGCGC^C 1515 GGCGCC BbrPI 1328 CACGTG CAC^GTG 2674 CACGTG BbsI 850 GAAGAC GAAGAC(2/6) 1467 GAAGAC BclI 767 TGATCA T^GATCA 2801 TGATCA BglI 1379 GCCCTGAGGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC 2747 GCCAAGTGGGC BglII 1739 AGATCT A^GATCT 1852 AGATCT BpuAI 850 GAAGAC GAAGAC(2/6) 1467 GAAGAC BsaWI 458 TCCGGA [AT]^CCGG[AT] 2927 TCCGGT BsiEI 315 CGGCCG CG[GA][CT]^CG 3003 CGGTCG BspHI 1394 TCATGA T^CATGA 1934 TCATGA BspMI 2607 GCAGGT ACCTGC(4/8) 2865 GCAGGT BsrDI 1620 CATTGC GCAATG(2/0) 2213 GCAATG BstAPI 1548 GCACTGCTTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC 3490 GCACAGTATGC EcoT22I 1190 ATGCAT ATGCA^T 1237 ATGCAT FbaI 767 TGATCA T^GATCA 2801 TGATCA HgaI 89 GCGTC GACGC(5/10) 222 GCGTC HincII 627 GTCAAC GT[CT]^[GA]AC 3144 GTCAAC HindII 627 GTCAAC GT[CT]^[GA]AC 3144 GTCAAC HindIII 825 AAGCTT A^AGCTT 1207 AAGCTT KasI 13 GGCGCC G^GCGCC 1515 GGCGCC MluNI 543 TGGCCA TGG^CCA 2217 TGGCCA MscI 543 TGGCCA TGG^CCA 2217 TGGCCA MseI 3256 TTAA T^TAA 3365 TTAA NarI 13 GGCGCC GG^CGCC 1515 GGCGCC NsiI 1190 ATGCAT ATGCA^T 1237 ATGCAT PmaCI 1328 CACGTG CAC^GTG 2674 CACGTG PmlI 1328 CACGTG CAC^GTG 2674 CACGTG PpuMI 434 GGGACCC [GA]G^G[AT]CC[CT] 1538 GGGACCC PshAI 2614 GACAACAGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC 2998 GACATCGGTC RcaI 1394 TCATGA T^CATGA 1934 TCATGA SfcI 1510 CTGCAG C^T[GA][CT]AG 2031 CTACAG SfoI 13 GGCGCC GGC^GCC 1515 GGCGCC SgrAI 15 CGCCGGCG C[GA]^CCGG[CT]G 54 CGCCGGCG Tru9I 3256 TTAA T^TAA 3365 TTAA ######################################### # 3 OR MORE CUT ENZYMES ( 107 enzymes) # ######################################### AccII AciI AcyI AfaI AflIII AluI AlwI AlwNI AspHI AvaI AvaII BanI BanII BbvI BcnI BmyI BpmI BsaAI BsaHI BsaI BsaJI BseRI BsgI BsiHKAI BsiYI BslI BsmAI BsmFI BsmI BsoBI Bsp1286I BsrBI BsrFI BsrI BssKI BstF5I BstNI BstUI BstXI BstYI Cac8I CfoI Cfr10I Cfr13I DdeI DpnII DraII DsaI EaeI EarI EcoNI EcoO109I EcoRII EcoT14I FauI Fnu4HI FokI HaeII HaeIII HapII HhaI Hin1I HinP1I HinfI HpaII HphI ItaI Ksp632I MaeII MaeIII MboI MboII MflI MnlI MslI MspA1I MspI MvaI MvnI MwoI NaeI NciI NcoI NdeII NgoMIV NlaIII NlaIV NspI PleI PvuII RsaI Sau3AI Sau96I ScrFI SfaNI SmaI StyI TaqI TfiI TseI Tsp45I Tsp509I TspRI TthHB8I XhoII XmaCI XmaI