################################## # NO CUT ENZYMES ( 90 enzymes) # ################################## AatII Acc65I AclI AflII AflIII AgeI AocI Aor51HI AscI AseI AsnI Asp700I Asp718I AviII AvrII BamHI BbrPI BcgI BfrI BlnI BsaBI BsiEI BsiWI BsmBI BspDI BspLU11I BsrBI BsrFI BssSI Bst1107I BstEII BstPI BstZ17I Bsu36I Cfr10I ClaI CpoI DraI EagI EclXI Eco47III Eco52I Eco81I EcoO65I EcoRI EcoRV FseI FspI HindIII HpaI KpnI KspI MamI MfeI MluI MunI NaeI NcoI NdeI NgoMIV NheI NotI NruI PacI PaeR7I PinAI PmaCI PmeI PmlI PshAI PshBI Psp1406I PvuI RsrII SacII SalI SbfI ScaI SexAI SfiI SgrAI SnaBI SpeI Sse8387I SspI StuI SwaI XbaI XhoI XmnI ################################### # ONE CUT ENZYMES ( 52 enzymes) # ################################### AccI 415 GTCTAC GT^[AC][GT]AC AccIII 1633 TCCGGA T^CCGGA AhdI 1806 GACATCAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC ApaI 492 GGGCCC GGGCC^C AspEI 1806 GACATCAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AspI 1675 GACAGAGTC GAC[ACGT]^[ACGT][ACGT]GTC BbeI 945 GGCGCC GGCGC^C BbsI 1363 GAAGAC GAAGAC(2/6) BbvCI 1427 CCTCAGC CCTCAGC(-5/-2) BglII 545 AGATCT A^GATCT BlpI 142 GCTGAGC GC^T[ACGT]AGC Bpu1102I 142 GCTGAGC GC^T[ACGT]AGC BpuAI 1363 GAAGAC GAAGAC(2/6) BsaAI 1618 TACGTG [CT]AC^GT[GA] BsaWI 1633 TCCGGA [AT]^CCGG[AT] BseAI 1633 TCCGGA T^CCGGA Bsp1407I 393 TGTACA T^GTACA BspEI 1633 TCCGGA T^CCGGA BspMI 1687 ACCTGC ACCTGC(4/8) BsrDI 1850 CATTGC GCAATG(2/0) BsrGI 393 TGTACA T^GTACA BssHII 1642 GCGCGC G^CGCGC BstBI 1784 TTCGAA TT^CGAA BstXI 2176 CCAGCACTTTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG CelII 142 GCTGAGC GC^T[ACGT]AGC DrdI 1008 GACCTTTTTGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC DsaI 169 CCACGG C^C[GA][CT]GG Eam1105I 1806 GACATCAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EcoNI 1481 CCTTCCACAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG EcoT22I 852 ATGCAT ATGCA^T HaeII 945 GGCGCC [GA]GCGC^[CT] HgaI 1665 GCGTC GACGC(5/10) KasI 945 GGCGCC G^GCGCC MaeIII 1175 GTGAC ^GT[ACGT]AC MroI 1633 TCCGGA T^CCGGA MslI 681 CATGAACATG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG NarI 945 GGCGCC GG^CGCC NsiI 852 ATGCAT ATGCA^T NspV 1784 TTCGAA TT^CGAA PflFI 1675 GACAGAGTC GAC[ACGT]^[ACGT][ACGT]GTC PvuII 880 CAGCTG CAG^CTG SacI 145 GAGCTC GAGCT^C SapI 1158 GCTCTTC GCTCTTC(1/4) SfoI 945 GGCGCC GGC^GCC SfuI 1784 TTCGAA TT^CGAA SmaI 2350 CCCGGG CCC^GGG SspBI 393 TGTACA T^GTACA Tsp45I 1175 GTGAC ^GT[GC]AC Tth111I 1675 GACAGAGTC GAC[ACGT]^[ACGT][ACGT]GTC XcmI 1769 CCATTGATGAGCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XmaCI 2350 CCCGGG C^CCGGG XmaI 2350 CCCGGG C^CCGGG ################################### # TWO CUT ENZYMES ( 32 enzymes) # ################################### AcsI 810 AAATTT [GA]^AATT[CT] 1960 GAATTT AcyI 945 GGCGCC G[GA]^CG[CT]C 1664 GGCGTC Alw44I 1651 GTGCAC G^TGCAC 1741 GTGCAC AlwNI 1414 CAGAACCTG CAG[ACGT][ACGT][ACGT]^CTG 2255 CAGTCTCTG ApaLI 1651 GTGCAC G^TGCAC 1741 GTGCAC ApoI 810 AAATTT [GA]^AATT[CT] 1960 GAATTT BalI 89 TGGCCA TGG^CCA 1600 TGGCCA BanI 945 GGCGCC G^G[CT][GA]CC 1240 GGTGCC BciVI 1842 GGATAC GTATCC(6/5) 1331 GTATCC BclI 1091 TGATCA T^GATCA 1421 TGATCA BglI 73 GCCACTCGGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC 2349 GCCCGGGAGGC BsaHI 945 GGCGCC G[GA]^CG[CT]C 1664 GGCGTC BsaI 736 GAGACC GGTCTC(1/5) 2307 GGTCTC BsmI 108 GAATGC GAATGC(1/-1) 1829 GCATTC BspHI 1052 TCATGA T^CATGA 1682 TCATGA DraIII 191 CACAGAGTG CAC[ACGT][ACGT][ACGT]^GTG 1459 CACGGCGTG EcoT14I 152 CCAAGG C^C[AT][AT]GG 1061 CCAAGG FbaI 1091 TGATCA T^GATCA 1421 TGATCA Hin1I 945 GGCGCC G[GA]^CG[CT]C 1664 GGCGTC HincII 1117 GTCAAC GT[CT]^[GA]AC 1891 GTCAAC HindII 1117 GTCAAC GT[CT]^[GA]AC 1891 GTCAAC MluNI 89 TGGCCA TGG^CCA 1600 TGGCCA MscI 89 TGGCCA TGG^CCA 1600 TGGCCA MseI 2099 TTAA T^TAA 2117 TTAA MspA1I 880 CAGCTG C[AC]G^C[GT]G 1197 CCGCTG PflMI 443 CCATCACCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1038 CCAGGAGTTGG RcaI 1052 TCATGA T^CATGA 1682 TCATGA SmlI 185 CTCAAG C^T[CT][GA]AG 2209 CTTGAG SphI 386 GCATGC GCATG^C 1880 GCATGC StyI 152 CCAAGG C^C[AT][AT]GG 1061 CCAAGG Tru9I 2099 TTAA T^TAA 2117 TTAA Van91I 443 CCATCACCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1038 CCAGGAGTTGG ######################################### # 3 OR MORE CUT ENZYMES ( 84 enzymes) # ######################################### AccII AciI AfaI AluI AlwI AspHI AvaI AvaII BanII BbvI BcnI BfaI BmyI BpmI BsaJI BseRI BsgI BsiHKAI BsiYI BslI BsmAI BsmFI BsoBI Bsp1286I BsrI BssKI BstAPI BstF5I BstNI BstUI BstYI Cac8I CfoI Cfr13I DdeI DpnII DraII EaeI EarI EcoO109I EcoRII FauI Fnu4HI FokI HaeIII HapII HhaI HinP1I HinfI HpaII HphI ItaI Ksp632I MaeI MaeII MboI MboII MflI MnlI MspI MvaI MvnI MwoI NciI NdeII NlaIII NlaIV NspI PleI PpuMI PstI RsaI Sau3AI Sau96I ScrFI SfaNI SfcI TaqI TfiI TseI Tsp509I TspRI TthHB8I XhoII