################################## # NO CUT ENZYMES ( 106 enzymes) # ################################## AatII Acc65I AccIII AclI AcsI AflII AgeI Aor51HI ApoI AscI AseI AsnI Asp718I BamHI BbrPI BciVI BfrI BglII BsaBI BsaI BsaWI BseAI BsiEI BsiWI BsmAI BsmBI BsmI Bsp1407I BspDI BspEI BspHI BsrDI BsrFI BsrGI BssHII BssSI Bst1107I BstAPI BstBI BstEII BstPI BstXI BstZ17I Cfr10I ClaI CpoI DraI DrdI DsaI EagI EclXI Eco47III Eco52I EcoNI EcoO65I EcoRI EcoRV EcoT22I FseI HpaI KpnI KspI MamI MfeI MluI MroI MslI MunI NaeI NcoI NdeI NgoMIV NheI NotI NruI NsiI NspV PacI PinAI PmaCI PmeI PmlI PshAI PshBI Psp1406I PvuI PvuII RcaI RsrII SacII SbfI ScaI SexAI SfuI SgrAI SmaI SnaBI SpeI SphI Sse8387I SspBI SspI SwaI XbaI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 52 enzymes) # ################################### AccI 1305 GTCGAC GT^[AC][GT]AC AccII 198 CGCG CG^CG AhdI 814 GACTACATGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC Alw44I 418 GTGCAC G^TGCAC AlwNI 1288 CAGAGCCTG CAG[ACGT][ACGT][ACGT]^CTG AocI 949 CCTGAGG CC^T[ACGT]AGG ApaI 889 GGGCCC GGGCC^C ApaLI 418 GTGCAC G^TGCAC AspEI 814 GACTACATGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AspI 103 GACAAAGTC GAC[ACGT]^[ACGT][ACGT]GTC AviII 614 TGCGCA TGC^GCA AvrII 9 CCTAGG C^CTAGG BalI 719 TGGCCA TGG^CCA BbvCI 1073 CCTCAGC CCTCAGC(-5/-2) BclI 1517 TGATCA T^GATCA BlnI 9 CCTAGG C^CTAGG BlpI 1449 GCTGAGC GC^T[ACGT]AGC Bpu1102I 1449 GCTGAGC GC^T[ACGT]AGC BsaAI 120 TACGTG [CT]AC^GT[GA] BsgI 1354 GTGCAG GTGCAG(16/14) BspLU11I 818 ACATGT A^CATGT BstUI 198 CGCG CG^CG BstYI 1484 AGATCC [GA]^GATC[CT] Bsu36I 949 CCTGAGG CC^T[ACGT]AGG CelII 1449 GCTGAGC GC^T[ACGT]AGC DraIII 381 CACCCAGTG CAC[ACGT][ACGT][ACGT]^GTG Eam1105I 814 GACTACATGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC Eco81I 949 CCTGAGG CC^T[ACGT]AGG FbaI 1517 TGATCA T^GATCA FspI 614 TGCGCA TGC^GCA HgaI 1101 GACGC GACGC(5/10) HindIII 220 AAGCTT A^AGCTT MflI 1484 AGATCC [GA]^GATC[CT] MluNI 719 TGGCCA TGG^CCA MscI 719 TGGCCA TGG^CCA MseI 92 TTAA T^TAA MvnI 198 CGCG CG^CG NspI 818 ACATGT [GA]CATG^[CT] PaeR7I 1222 CTCGAG C^TCGAG PflFI 103 GACAAAGTC GAC[ACGT]^[ACGT][ACGT]GTC PstI 1253 CTGCAG CTGCA^G SacI 1137 GAGCTC GAGCT^C SalI 1305 GTCGAC G^TCGAC SapI 847 GAAGAGC GCTCTTC(1/4) SfcI 1253 CTGCAG C^T[GA][CT]AG SfiI 399 GGCCTTCGAGGCC GGCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGCC Tru9I 92 TTAA T^TAA Tsp509I 433 AATT ^AATT Tth111I 103 GACAAAGTC GAC[ACGT]^[ACGT][ACGT]GTC XcmI 1287 CCAGAGCCTGTCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XhoI 1222 CTCGAG C^TCGAG XhoII 1484 AGATCC [GA]^GATC[CT] ################################### # TWO CUT ENZYMES ( 30 enzymes) # ################################### AfaI 249 GTAC GT^AC 429 GTAC AlwI 1485 GATCC GGATC(4/5) 549 GGATC Asp700I 513 GAACCACTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 1422 GAAAAAGTTC AspHI 418 GTGCAC G[AT]GC[AT]^C 1137 GAGCTC BanII 889 GGGCCC G[GA]GC[CT]^C 1137 GAGCTC BbeI 711 GGCGCC GGCGC^C 870 GGCGCC BbsI 1098 GAAGAC GAAGAC(2/6) 1440 GAAGAC BcgI 605 CGAGCGAGCTGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) 1245 CGAGATGCCTGC BcnI 300 CCGGG CC^[GC]GG 449 CCCGG BfaI 10 CTAG C^TAG 17 CTAG BpuAI 1098 GAAGAC GAAGAC(2/6) 1440 GAAGAC BsiHKAI 418 GTGCAC G[AT]GC[AT]^C 1137 GAGCTC BspMI 1415 ACCTGC ACCTGC(4/8) 1356 GCAGGT BsrBI 142 GAGCGG CCGCTC(-3/-3) 1117 GAGCGG EaeI 591 TGGCCG [CT]^GGCC[GA] 719 TGGCCA EarI 1081 CTCTTC CTCTTC(1/4) 847 GAAGAG HaeII 711 GGCGCC [GA]GCGC^[CT] 870 GGCGCC KasI 711 GGCGCC G^GCGCC 870 GGCGCC Ksp632I 1081 CTCTTC CTCTTC(1/4) 847 GAAGAG MaeI 10 CTAG C^TAG 17 CTAG NarI 711 GGCGCC GG^CGCC 870 GGCGCC NciI 300 CCGGG CC^[GC]GG 449 CCCGG PflMI 621 CCACGACCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 804 CCAAGAGGTGG PpuMI 1281 GGGACCC [GA]G^G[AT]CC[CT] 1412 AGGACCT RsaI 249 GTAC GT^AC 429 GTAC SfoI 711 GGCGCC GGC^GCC 870 GGCGCC TfiI 126 GAATC G^A[AT]TC 190 GAATC Tsp45I 31 GTCAC ^GT[GC]AC 1360 GTGAC Van91I 621 CCACGACCTGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 804 CCAAGAGGTGG XmnI 513 GAACCACTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 1422 GAAAAAGTTC ######################################### # 3 OR MORE CUT ENZYMES ( 70 enzymes) # ######################################### AciI AcyI AflIII AluI AvaI AvaII BanI BbvI BglI BmyI BpmI BsaHI BsaJI BseRI BsiYI BslI BsmFI BsoBI Bsp1286I BsrI BssKI BstF5I BstNI Cac8I CfoI Cfr13I DdeI DpnII DraII EcoO109I EcoRII EcoT14I FauI Fnu4HI FokI HaeIII HapII HhaI Hin1I HinP1I HincII HindII HinfI HpaII HphI ItaI MaeII MaeIII MboI MboII MnlI MspA1I MspI MvaI MwoI NdeII NlaIII NlaIV PleI Sau3AI Sau96I ScrFI SfaNI SmlI StuI StyI TaqI TseI TspRI TthHB8I