################################## # NO CUT ENZYMES ( 96 enzymes) # ################################## AatII Acc65I AccIII AclI AflIII AgeI Alw44I AocI Aor51HI ApaLI AscI AseI AsnI Asp700I Asp718I AspI AviII AvrII BalI BamHI BbeI BcgI BlnI BlpI Bpu1102I BsaWI BseAI BsiEI BsiWI BspDI BspEI BspHI BspLU11I BspMI BssHII BssSI Bst1107I BstBI BstZ17I Bsu36I CelII ClaI CpoI DsaI EaeI EagI EclXI Eco47III Eco52I Eco81I EcoNI FseI FspI HaeII KasI KpnI KspI MluI MluNI MroI MscI NarI NcoI NheI NotI NruI NspV PacI PflFI PinAI PmeI PshAI PshBI Psp1406I PvuI RcaI RsrII SacII SapI SbfI ScaI SexAI SfiI SfoI SfuI SgrAI SmaI SpeI SphI Sse8387I SwaI Tth111I XbaI XmaCI XmaI XmnI ################################### # ONE CUT ENZYMES ( 50 enzymes) # ################################### AccII 1346 CGCG CG^CG AcyI 112 GACGCC G[GA]^CG[CT]C AflII 2751 CTTAAG C^TTAAG AhdI 1585 GACCAGAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC ApaI 2768 GGGCCC GGGCC^C AspEI 1585 GACCAGAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AvaI 2830 CTCGAG C^[CT]CG[GA]G BanI 276 GGTGCC G^G[CT][GA]CC BbvCI 2966 CCTCAGC CCTCAGC(-5/-2) BclI 2237 TGATCA T^GATCA BfrI 2751 CTTAAG C^TTAAG BglI 2146 GCCTTACAGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC BsaBI 1822 GATATTTATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC BsaHI 112 GACGCC G[GA]^CG[CT]C BsaI 3178 GGTCTC GGTCTC(1/5) BsmBI 2080 GAGACG CGTCTC(1/5) BsoBI 2830 CTCGAG C^[CT]CG[GA]G BsrBI 1075 GAGCGG CCGCTC(-3/-3) BsrFI 41 GCCGGC [GA]^CCGG[CT] BstEII 172 GGTGACC G^GT[ACGT]ACC BstPI 172 GGTGACC G^GT[ACGT]ACC BstUI 1346 CGCG CG^CG Cfr10I 41 GCCGGC [GA]^CCGG[CT] DraI 2100 TTTAAA TTT^AAA DrdI 2322 GACTGTTCAGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC Eam1105I 1585 GACCAGAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EcoO65I 172 GGTGACC G^GT[ACGT]ACC EcoRI 1244 GAATTC G^AATTC EcoRV 1660 GATATC GAT^ATC EcoT14I 1557 CCTTGG C^C[AT][AT]GG FauI 1344 CCCGC CCCGC(4/6) FbaI 2237 TGATCA T^GATCA HgaI 112 GACGC GACGC(5/10) Hin1I 112 GACGCC G[GA]^CG[CT]C HpaI 1011 GTTAAC GTT^AAC MamI 1822 GATATTTATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC MvnI 1346 CGCG CG^CG NaeI 41 GCCGGC GCC^GGC NdeI 212 CATATG CA^TATG NgoMIV 41 GCCGGC G^CCGGC PaeR7I 2830 CTCGAG C^TCGAG PpuMI 2962 AGGACCT [GA]G^G[AT]CC[CT] PstI 473 CTGCAG CTGCA^G SacI 2791 GAGCTC GAGCT^C SalI 3365 GTCGAC G^TCGAC SnaBI 3197 TACGTA TAC^GTA StuI 971 AGGCCT AGG^CCT StyI 1557 CCTTGG C^C[AT][AT]GG XcmI 2810 CCATGACCACAGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XhoI 2830 CTCGAG C^TCGAG ################################### # TWO CUT ENZYMES ( 31 enzymes) # ################################### AccI 194 GTAGAC GT^[AC][GT]AC 3365 GTCGAC AlwNI 1684 CAGAAGCTG CAG[ACGT][ACGT][ACGT]^CTG 3262 CAGCAGCTG BbrPI 2416 CACGTG CAC^GTG 3016 CACGTG BbsI 2409 GAAGAC GAAGAC(2/6) 2891 GTCTTC BcnI 2457 CCCGG CC^[GC]GG 2936 CCGGG BglII 830 AGATCT A^GATCT 3054 AGATCT BpmI 2794 CTCCAG CTGGAG(16/14) 2864 CTGGAG BpuAI 2409 GAAGAC GAAGAC(2/6) 2891 GTCTTC BsmI 2881 GAATGC GAATGC(1/-1) 3048 GAATGC Bsp1407I 759 TGTACA T^GTACA 2265 TGTACA BsrGI 759 TGTACA T^GTACA 2265 TGTACA BstAPI 1060 GCATACTATGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC 3219 GCAGGAAATGC BstXI 353 CCACCAGAGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 969 CCAGGCCTTTGG CfoI 350 GCGC GCG^C 727 GCGC DraII 2768 GGGCCCT [GA]G^G[ACGT]CC[CT] 2962 AGGACCT DraIII 9 CACACAGTG CAC[ACGT][ACGT][ACGT]^GTG 538 CACCTTGTG EcoO109I 2768 GGGCCCT [GA]G^G[ACGT]CC[CT] 2962 AGGACCT EcoT22I 488 ATGCAT ATGCA^T 947 ATGCAT HhaI 350 GCGC GCG^C 727 GCGC HinP1I 350 GCGC G^CGC 727 GCGC HincII 1011 GTTAAC GT[CT]^[GA]AC 3365 GTCGAC HindII 1011 GTTAAC GT[CT]^[GA]AC 3365 GTCGAC HindIII 1112 AAGCTT A^AGCTT 1412 AAGCTT MfeI 872 CAATTG C^AATTG 2642 CAATTG MunI 872 CAATTG C^AATTG 2642 CAATTG NciI 2457 CCCGG CC^[GC]GG 2936 CCGGG NsiI 488 ATGCAT ATGCA^T 947 ATGCAT NspI 490 GCATGT [GA]CATG^[CT] 582 ACATGC PmaCI 2416 CACGTG CAC^GTG 3016 CACGTG PmlI 2416 CACGTG CAC^GTG 3016 CACGTG SspBI 759 TGTACA T^GTACA 2265 TGTACA ######################################### # 3 OR MORE CUT ENZYMES ( 81 enzymes) # ######################################### AciI AcsI AfaI AluI AlwI ApoI AspHI AvaII BanII BbvI BciVI BfaI BmyI BsaAI BsaJI BseRI BsgI BsiHKAI BsiYI BslI BsmAI BsmFI Bsp1286I BsrDI BsrI BssKI BstF5I BstNI BstYI Cac8I Cfr13I DdeI DpnII EarI EcoRII Fnu4HI FokI HaeIII HapII HinfI HpaII HphI ItaI Ksp632I MaeI MaeII MaeIII MboI MboII MflI MnlI MseI MslI MspA1I MspI MvaI MwoI NdeII NlaIII NlaIV PflMI PleI PvuII RsaI Sau3AI Sau96I ScrFI SfaNI SfcI SmlI SspI TaqI TfiI Tru9I TseI Tsp45I Tsp509I TspRI TthHB8I Van91I XhoII