################################## # NO CUT ENZYMES ( 90 enzymes) # ################################## AatII AccI AccIII AclI AcyI AflII AgeI AhdI Alw44I ApaI ApaLI AscI AseI AsnI AspEI AspHI AviII AvrII BamHI BbeI BbrPI BbvCI BcgI BfrI BlnI BsaBI BsaHI BseAI BsiEI BsiHKAI BsiWI BsmBI BspDI BspEI BsrBI BssHII Bst1107I BstEII BstPI BstZ17I ClaI CpoI DraII DraIII DrdI EagI Eam1105I EclXI Eco52I EcoO109I EcoO65I EcoRI EcoRV FseI FspI HgaI Hin1I HpaI KasI KspI MamI MluI MroI NarI NotI NruI PacI PflMI PinAI PmaCI PmeI PmlI PpuMI PshBI Psp1406I PvuI RsrII SacI SacII SalI SbfI SfiI SfoI SgrAI SmaI Sse8387I SwaI Van91I XmaCI XmaI ################################### # ONE CUT ENZYMES ( 31 enzymes) # ################################### Acc65I 415 GGTACC G^GTACC AccII 2956 CGCG CG^CG AflIII 1019 ACATGT A^C[GA][CT]GT Aor51HI 3800 AGCGCT AGC^GCT Asp718I 415 GGTACC G^GTACC BsaWI 2441 ACCGGA [AT]^CCGG[AT] BspHI 1367 TCATGA T^CATGA BspLU11I 1019 ACATGT A^CATGT BssSI 2423 CTCGTG CACGAG(-5/-1) BstBI 551 TTCGAA TT^CGAA BstUI 2956 CGCG CG^CG DraI 2257 TTTAAA TTT^AAA Eco47III 3800 AGCGCT AGC^GCT EcoNI 3117 CCTACCTAAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG HincII 3465 GTCAAC GT[CT]^[GA]AC HindII 3465 GTCAAC GT[CT]^[GA]AC KpnI 415 GGTACC GGTAC^C MfeI 3974 CAATTG C^AATTG MunI 3974 CAATTG C^AATTG MvnI 2956 CGCG CG^CG NcoI 49 CCATGG C^CATGG NspV 551 TTCGAA TT^CGAA PshAI 899 GACCTGAGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC RcaI 1367 TCATGA T^CATGA ScaI 2781 AGTACT AGT^ACT SexAI 759 ACCTGGT A^CC[AT]GGT SfuI 551 TTCGAA TT^CGAA SnaBI 2149 TACGTA TAC^GTA SphI 3512 GCATGC GCATG^C XbaI 2892 TCTAGA T^CTAGA XcmI 818 CCATCCCTTCCCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG ################################### # TWO CUT ENZYMES ( 37 enzymes) # ################################### AlwNI 1127 CAGCTCCTG CAG[ACGT][ACGT][ACGT]^CTG 3704 CAGATACTG AocI 1303 CCTAAGG CC^T[ACGT]AGG 3121 CCTAAGG AspI 585 GACCAAGTC GAC[ACGT]^[ACGT][ACGT]GTC 4020 GACCGAGTC BanII 2235 GAGCCC G[GA]GC[CT]^C 2685 GAGCCC BclI 2210 TGATCA T^GATCA 2670 TGATCA BlpI 2524 GCTGAGC GC^T[ACGT]AGC 3249 GCTGAGC Bpu1102I 2524 GCTGAGC GC^T[ACGT]AGC 3249 GCTGAGC BsaAI 1387 CACGTA [CT]AC^GT[GA] 2149 TACGTA BsaI 2983 GAGACC GGTCTC(1/5) 4018 GAGACC BsgI 2289 CTGCAC GTGCAG(16/14) 2106 GTGCAG Bsp1407I 327 TGTACA T^GTACA 3162 TGTACA BspMI 720 ACCTGC ACCTGC(4/8) 2179 ACCTGC BsrFI 1796 GCCGGC [GA]^CCGG[CT] 2087 GCCGGC BsrGI 327 TGTACA T^GTACA 3162 TGTACA Bsu36I 1303 CCTAAGG CC^T[ACGT]AGG 3121 CCTAAGG CelII 2524 GCTGAGC GC^T[ACGT]AGC 3249 GCTGAGC Cfr10I 1796 GCCGGC [GA]^CCGG[CT] 2087 GCCGGC Eco81I 1303 CCTAAGG CC^T[ACGT]AGG 3121 CCTAAGG EcoT22I 1736 ATGCAT ATGCA^T 3639 ATGCAT FauI 2610 CCCGC CCCGC(4/6) 2509 GCGGG FbaI 2210 TGATCA T^GATCA 2670 TGATCA HaeII 1969 AGCGCC [GA]GCGC^[CT] 3800 AGCGCT MslI 1896 CACCAAGGTG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG 3513 CATGCTTGTG NaeI 1796 GCCGGC GCC^GGC 2087 GCCGGC NdeI 1375 CATATG CA^TATG 1573 CATATG NgoMIV 1796 GCCGGC G^CCGGC 2087 GCCGGC NheI 696 GCTAGC G^CTAGC 2709 GCTAGC NsiI 1736 ATGCAT ATGCA^T 3639 ATGCAT PaeR7I 2189 CTCGAG C^TCGAG 3470 CTCGAG PflFI 585 GACCAAGTC GAC[ACGT]^[ACGT][ACGT]GTC 4020 GACCGAGTC SapI 2232 GAAGAGC GCTCTTC(1/4) 2533 GAAGAGC SpeI 256 ACTAGT A^CTAGT 399 ACTAGT SspBI 327 TGTACA T^GTACA 3162 TGTACA SspI 282 AATATT AAT^ATT 1357 AATATT StuI 220 AGGCCT AGG^CCT 2873 AGGCCT Tth111I 585 GACCAAGTC GAC[ACGT]^[ACGT][ACGT]GTC 4020 GACCGAGTC XhoI 2189 CTCGAG C^TCGAG 3470 CTCGAG ######################################### # 3 OR MORE CUT ENZYMES ( 100 enzymes) # ######################################### AciI AcsI AfaI AluI AlwI ApoI Asp700I AvaI AvaII BalI BanI BbsI BbvI BciVI BcnI BfaI BglI BglII BmyI BpmI BpuAI BsaJI BseRI BsiYI BslI BsmAI BsmFI BsmI BsoBI Bsp1286I BsrDI BsrI BssKI BstAPI BstF5I BstNI BstXI BstYI Cac8I CfoI Cfr13I DdeI DpnII DsaI EaeI EarI EcoRII EcoT14I Fnu4HI FokI HaeIII HapII HhaI HinP1I HindIII HinfI HpaII HphI ItaI Ksp632I MaeI MaeII MaeIII MboI MboII MflI MluNI MnlI MscI MseI MspA1I MspI MvaI MwoI NciI NdeII NlaIII NlaIV NspI PleI PstI PvuII RsaI Sau3AI Sau96I ScrFI SfaNI SfcI SmlI StyI TaqI TfiI Tru9I TseI Tsp45I Tsp509I TspRI TthHB8I XhoII XmnI