################################## # NO CUT ENZYMES ( 125 enzymes) # ################################## AccI AccIII AclI AcsI AflII AflIII AgeI AhdI Alw44I AlwI AocI Aor51HI ApaI ApaLI ApoI AscI AseI AsnI Asp700I AspEI AvrII BamHI BbeI BbrPI BciVI BclI BfrI BglII BlnI BlpI Bpu1102I BsaAI BsaBI BsaI BsaWI BseAI BsiEI BsiWI BsmBI Bsp1407I BspEI BspLU11I BsrBI BsrGI BssHII BssSI Bst1107I BstBI BstEII BstPI BstYI BstZ17I Bsu36I CelII CpoI DraI DraIII DrdI EagI Eam1105I EarI EclXI Eco47III Eco52I Eco81I EcoNI EcoO65I EcoRI EcoT22I FbaI FseI HaeII HgaI HincII HindII HindIII HpaI KasI Ksp632I KspI MamI MflI MluI MroI NarI NheI NotI NruI NsiI NspV PacI PaeR7I PinAI PmaCI PmeI PmlI PshAI PshBI Psp1406I PstI PvuI RsrII SacII SalI SapI SbfI ScaI SexAI SfiI SfoI SfuI SmaI SnaBI SpeI Sse8387I SspBI SspI StuI SwaI XbaI XhoI XhoII XmaCI XmaI XmnI ################################### # ONE CUT ENZYMES ( 49 enzymes) # ################################### AatII 554 GACGTC GACGT^C Acc65I 28 GGTACC G^GTACC AccII 695 CGCG CG^CG AcyI 554 GACGTC G[GA]^CG[CT]C Asp718I 28 GGTACC G^GTACC AspI 551 GACGACGTC GAC[ACGT]^[ACGT][ACGT]GTC AvaI 500 CTCGGG C^[CT]CG[GA]G AviII 1280 TGCGCA TGC^GCA BalI 785 TGGCCA TGG^CCA BbsI 318 GAAGAC GAAGAC(2/6) BbvCI 342 GCTGAGG CCTCAGC(-5/-2) BcgI 631 CGAGGTGGATGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BfaI 718 CTAG C^TAG BpuAI 318 GAAGAC GAAGAC(2/6) BsaHI 554 GACGTC G[GA]^CG[CT]C BsmI 729 GAATGC GAATGC(1/-1) BsoBI 500 CTCGGG C^[CT]CG[GA]G BspDI 1197 ATCGAT AT^CGAT BspHI 558 TCATGA T^CATGA BsrDI 924 CATTGC GCAATG(2/0) BstUI 695 CGCG CG^CG BstXI 1241 CCACTCCCATGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG CfoI 1281 GCGC GCG^C ClaI 1197 ATCGAT AT^CGAT FspI 1280 TGCGCA TGC^GCA HhaI 1281 GCGC GCG^C Hin1I 554 GACGTC G[GA]^CG[CT]C HinP1I 1281 GCGC G^CGC KpnI 28 GGTACC GGTAC^C MaeI 718 CTAG C^TAG MaeII 555 ACGT A^CGT MfeI 1115 CAATTG C^AATTG MluNI 785 TGGCCA TGG^CCA MscI 785 TGGCCA TGG^CCA MunI 1115 CAATTG C^AATTG MvnI 695 CGCG CG^CG NaeI 626 GCCGGC GCC^GGC NdeI 671 CATATG CA^TATG NgoMIV 626 GCCGGC G^CCGGC NspI 1277 GCATGC [GA]CATG^[CT] PflFI 551 GACGACGTC GAC[ACGT]^[ACGT][ACGT]GTC PpuMI 407 AGGTCCC [GA]G^G[AT]CC[CT] RcaI 558 TCATGA T^CATGA SgrAI 625 CGCCGGCG C[GA]^CCGG[CT]G SphI 1277 GCATGC GCATG^C TaqI 1198 TCGA T^CGA TfiI 1220 GAATC G^A[AT]TC Tth111I 551 GACGACGTC GAC[ACGT]^[ACGT][ACGT]GTC TthHB8I 1198 TCGA T^CGA ################################### # TWO CUT ENZYMES ( 34 enzymes) # ################################### AfaI 29 GTAC GT^AC 799 GTAC AlwNI 866 CAGCGACTG CAG[ACGT][ACGT][ACGT]^CTG 877 CAGACTCTG AspHI 852 GAGCTC G[AT]GC[AT]^C 1007 GAGCTC AvaII 408 GGTCC G^G[AT]CC 603 GGACC BanI 28 GGTACC G^G[CT][GA]CC 1131 GGCACC BcnI 9 CCGGG CC^[GC]GG 32 CCGGG BglI 76 GCCAGTGGGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC 1183 GCCCCTGTGGC BsiHKAI 852 GAGCTC G[AT]GC[AT]^C 1007 GAGCTC BsmAI 128 GAGAC GTCTC(1/5) 1144 GTCTC BsrFI 378 ACCGGC [GA]^CCGG[CT] 626 GCCGGC BstAPI 158 GCAAGCGTTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC 1036 GCACCTCCTGC Cfr10I 378 ACCGGC [GA]^CCGG[CT] 626 GCCGGC DpnII 562 GATC ^GATC 1083 GATC DraII 48 AGGCCCT [GA]G^G[ACGT]CC[CT] 407 AGGTCCC EaeI 785 TGGCCA [CT]^GGCC[GA] 1289 CGGCCA EcoO109I 48 AGGCCCT [GA]G^G[ACGT]CC[CT] 407 AGGTCCC EcoRV 170 GATATC GAT^ATC 571 GATATC FauI 101 GCGGG CCCGC(4/6) 747 GCGGG MboI 562 GATC ^GATC 1083 GATC MboII 318 GAAGA GAAGA(8/7) 230 TCTTC MseI 760 TTAA T^TAA 914 TTAA MslI 1242 CACTCCCATG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG 1287 CACGGCCATG NciI 9 CCGGG CC^[GC]GG 32 CCGGG NdeII 562 GATC ^GATC 1083 GATC PflMI 1122 CCAGGGAATGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1206 CCAACCCTTGG RsaI 29 GTAC GT^AC 799 GTAC SacI 852 GAGCTC GAGCT^C 1007 GAGCTC Sau3AI 562 GATC ^GATC 1083 GATC SfcI 123 CTGTAG C^T[GA][CT]AG 961 CTACAG SmlI 135 CTTGAG C^T[CT][GA]AG 430 CTCAAG Tru9I 760 TTAA T^TAA 914 TTAA Tsp509I 271 AATT ^AATT 1116 AATT Van91I 1122 CCAGGGAATGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 1206 CCAACCCTTGG XcmI 1148 CCATGGCTCCTGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG 1238 CCACCACTCCCATGG ######################################### # 3 OR MORE CUT ENZYMES ( 50 enzymes) # ######################################### AciI AluI BanII BbvI BmyI BpmI BsaJI BseRI BsgI BsiYI BslI BsmFI Bsp1286I BspMI BsrI BssKI BstF5I BstNI Cac8I Cfr13I DdeI DsaI EcoRII EcoT14I Fnu4HI FokI HaeIII HapII HinfI HpaII HphI ItaI MaeIII MnlI MspA1I MspI MvaI MwoI NcoI NlaIII NlaIV PleI PvuII Sau96I ScrFI SfaNI StyI TseI Tsp45I TspRI