################################## # NO CUT ENZYMES ( 58 enzymes) # ################################## AatII Acc65I AccIII AcsI AflII ApaI ApoI AscI AseI AsnI Asp700I Asp718I AvrII BamHI BbvCI BfrI BlnI BseAI BsiWI BspDI BspEI BspLU11I BssHII Bst1107I BstBI BstZ17I ClaI CpoI EcoRI FseI HincII HindII HpaI KpnI MluI MroI NaeI NgoMIV NotI NruI NspV PacI PaeR7I PmeI PshBI PvuI RsrII SalI ScaI SfuI SgrAI SnaBI SpeI SspI SwaI XbaI XhoI XmnI ################################### # ONE CUT ENZYMES ( 63 enzymes) # ################################### AccI 2224 GTCTAC GT^[AC][GT]AC AclI 659 AACGTT AA^CGTT AgeI 413 ACCGGT A^CCGGT AhdI 427 GACGGCCAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AocI 603 CCTGAGG CC^T[ACGT]AGG Aor51HI 104 AGCGCT AGC^GCT AspEI 427 GACGGCCAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AviII 821 TGCGCA TGC^GCA BbeI 911 GGCGCC GGCGC^C BciVI 3529 GTATCC GTATCC(6/5) BglI 1301 GCCACGTGGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC BlpI 3243 GCTGAGC GC^T[ACGT]AGC Bpu1102I 3243 GCTGAGC GC^T[ACGT]AGC BsaBI 2502 GATGTACATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC BsaWI 413 ACCGGT [AT]^CCGG[AT] BsiEI 173 CGGCCG CG[GA][CT]^CG BsmI 2652 GAATGC GAATGC(1/-1) BsrFI 413 ACCGGT [GA]^CCGG[CT] BstEII 2163 GGTAACC G^GT[ACGT]ACC BstPI 2163 GGTAACC G^GT[ACGT]ACC Bsu36I 603 CCTGAGG CC^T[ACGT]AGG CelII 3243 GCTGAGC GC^T[ACGT]AGC Cfr10I 413 ACCGGT [GA]^CCGG[CT] DraI 1168 TTTAAA TTT^AAA DraIII 3145 CACGCGGTG CAC[ACGT][ACGT][ACGT]^GTG EagI 173 CGGCCG C^GGCCG Eam1105I 427 GACGGCCAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EclXI 173 CGGCCG C^GGCCG Eco47III 104 AGCGCT AGC^GCT Eco52I 173 CGGCCG C^GGCCG Eco81I 603 CCTGAGG CC^T[ACGT]AGG EcoNI 3024 CCTCCCCAAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG EcoO65I 2163 GGTAACC G^GT[ACGT]ACC EcoRV 1438 GATATC GAT^ATC EcoT22I 2572 ATGCAT ATGCA^T FspI 821 TGCGCA TGC^GCA KasI 911 GGCGCC G^GCGCC KspI 3278 CCGCGG CCGC^GG MamI 2502 GATGTACATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC MfeI 666 CAATTG C^AATTG MunI 666 CAATTG C^AATTG NarI 911 GGCGCC GG^CGCC NdeI 2722 CATATG CA^TATG NheI 2394 GCTAGC G^CTAGC NsiI 2572 ATGCAT ATGCA^T PinAI 413 ACCGGT A^CCGGT PpuMI 3386 AGGACCT [GA]G^G[AT]CC[CT] PshAI 672 GACCTATGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC Psp1406I 659 AACGTT AA^CGTT PvuII 3241 CAGCTG CAG^CTG SacI 1885 GAGCTC GAGCT^C SacII 3278 CCGCGG CCGC^GG SbfI 3390 CCTGCAGG CCTGCA^GG SexAI 2691 ACCAGGT A^CC[AT]GGT SfiI 1300 GGCCACGTGGGCC GGCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGCC SfoI 911 GGCGCC GGC^GCC SmaI 3172 CCCGGG CCC^GGG SmlI 1756 CTTGAG C^T[CT][GA]AG SphI 2570 GCATGC GCATG^C Sse8387I 3390 CCTGCAGG CCTGCA^GG StuI 753 AGGCCT AGG^CCT XmaCI 3172 CCCGGG C^CCGGG XmaI 3172 CCCGGG C^CCGGG ################################### # TWO CUT ENZYMES ( 24 enzymes) # ################################### AflIII 251 ACACGT A^C[GA][CT]GT 3326 ACGTGT AspI 274 GACCCGGTC GAC[ACGT]^[ACGT][ACGT]GTC 649 GACATAGTC BalI 113 TGGCCA TGG^CCA 1299 TGGCCA BbrPI 1303 CACGTG CAC^GTG 2746 CACGTG BbsI 2751 GAAGAC GAAGAC(2/6) 3361 GAAGAC BcgI 1016 CGATAAAGCTGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) 88 GCAGGAGCGTCG BclI 2120 TGATCA T^GATCA 2171 TGATCA BglII 1719 AGATCT A^GATCT 2075 AGATCT BpuAI 2751 GAAGAC GAAGAC(2/6) 3361 GAAGAC BsaI 2995 GAGACC GGTCTC(1/5) 3267 GGTCTC BssSI 1086 CACGAG CACGAG(-5/-1) 3337 CACGAG BstXI 2243 CCAGCAACCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 2811 CCAAGGCTCTGG DraII 3159 AGGCCCC [GA]G^G[ACGT]CC[CT] 3386 AGGACCT DrdI 124 GACGGAGATGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC 3435 GACGCCTCCGTC EcoO109I 3159 AGGCCCC [GA]G^G[ACGT]CC[CT] 3386 AGGACCT FbaI 2120 TGATCA T^GATCA 2171 TGATCA HindIII 1194 AAGCTT A^AGCTT 1688 AAGCTT MluNI 113 TGGCCA TGG^CCA 1299 TGGCCA MscI 113 TGGCCA TGG^CCA 1299 TGGCCA NcoI 1256 CCATGG C^CATGG 2924 CCATGG PflFI 274 GACCCGGTC GAC[ACGT]^[ACGT][ACGT]GTC 649 GACATAGTC PmaCI 1303 CACGTG CAC^GTG 2746 CACGTG PmlI 1303 CACGTG CAC^GTG 2746 CACGTG Tth111I 274 GACCCGGTC GAC[ACGT]^[ACGT][ACGT]GTC 649 GACATAGTC ######################################### # 3 OR MORE CUT ENZYMES ( 113 enzymes) # ######################################### AccII AciI AcyI AfaI AluI Alw44I AlwI AlwNI ApaLI AspHI AvaI AvaII BanI BanII BbvI BcnI BfaI BmyI BpmI BsaAI BsaHI BsaJI BseRI BsgI BsiHKAI BsiYI BslI BsmAI BsmBI BsmFI BsoBI Bsp1286I Bsp1407I BspHI BspMI BsrBI BsrDI BsrGI BsrI BssKI BstAPI BstF5I BstNI BstUI BstYI Cac8I CfoI Cfr13I DdeI DpnII DsaI EaeI EarI EcoRII EcoT14I FauI Fnu4HI FokI HaeII HaeIII HapII HgaI HhaI Hin1I HinP1I HinfI HpaII HphI ItaI Ksp632I MaeI MaeII MaeIII MboI MboII MflI MnlI MseI MslI MspA1I MspI MvaI MvnI MwoI NciI NdeII NlaIII NlaIV NspI PflMI PleI PstI RcaI RsaI SapI Sau3AI Sau96I ScrFI SfaNI SfcI SspBI StyI TaqI TfiI Tru9I TseI Tsp45I Tsp509I TspRI TthHB8I Van91I XcmI XhoII