################################## # NO CUT ENZYMES ( 169 enzymes) # ################################## AatII Acc65I AccI AccIII AclI AcyI AflII AflIII AgeI AhdI AlwI AlwNI AocI Aor51HI ApaI AscI AseI AsnI Asp718I AspEI AvaI AviII AvrII BalI BamHI BanI BanII BbeI BbrPI BbvCI BcgI BciVI BclI BcnI BfrI BglI BglII BlnI BsaAI BsaBI BsaHI BsaI BsaWI BseAI BsgI BsiEI BsiWI BsiYI BslI BsmAI BsmBI BsmI BsoBI Bsp1407I BspDI BspEI BspHI BspLU11I BspMI BsrBI BsrDI BsrGI BsrI BssHII BssSI Bst1107I BstAPI BstBI BstEII BstPI BstXI BstYI BstZ17I Bsu36I ClaI CpoI DraI DraII DraIII DrdI DsaI EaeI EagI Eam1105I EclXI Eco47III Eco52I Eco81I EcoNI EcoO109I EcoO65I EcoRV EcoT14I EcoT22I FauI FbaI FseI FspI HaeIII Hin1I HincII HindII HindIII HpaI HphI KasI KpnI KspI MaeII MaeIII MamI MflI MluI MluNI MroI MscI MslI NarI NciI NcoI NdeI NheI NotI NruI NsiI NspV PacI PaeR7I PflMI PinAI PmaCI PmeI PmlI PpuMI PshAI PshBI Psp1406I PstI PvuI RcaI RsrII SacI SacII SalI SbfI ScaI SexAI SfcI SfiI SfoI SfuI SgrAI SmaI SnaBI SpeI SphI Sse8387I SspBI StuI StyI SwaI Tsp45I Van91I XbaI XcmI XhoI XhoII XmaCI XmaI ################################### # ONE CUT ENZYMES ( 50 enzymes) # ################################### AciI 432 CCGC CCGC(-3/-1) Alw44I 373 GTGCAC G^TGCAC ApaLI 373 GTGCAC G^TGCAC AspHI 373 GTGCAC G[AT]GC[AT]^C AspI 394 GACTTGGTC GAC[ACGT]^[ACGT][ACGT]GTC AvaII 102 GGACC G^G[AT]CC BbsI 400 GTCTTC GAAGAC(2/6) BlpI 112 GCTCAGC GC^T[ACGT]AGC BmyI 373 GTGCAC G[AGT]GC[ACT]^C Bpu1102I 112 GCTCAGC GC^T[ACGT]AGC BpuAI 400 GTCTTC GAAGAC(2/6) BseRI 291 GAGGAG GAGGAG(10/8) BsiHKAI 373 GTGCAC G[AT]GC[AT]^C BsmFI 347 GTCCC GGGAC(10/14) Bsp1286I 373 GTGCAC G[AGT]GC[ACT]^C BsrFI 452 GCCGGC [GA]^CCGG[CT] Cac8I 452 GCCGGC GC[ACGT]^[ACGT]GC CelII 112 GCTCAGC GC^T[ACGT]AGC CfoI 14 GCGC GCG^C Cfr10I 452 GCCGGC [GA]^CCGG[CT] Cfr13I 102 GGACC G^G[ACGT]CC DpnII 21 GATC ^GATC EarI 77 CTCTTC CTCTTC(1/4) HaeII 13 AGCGCC [GA]GCGC^[CT] HhaI 14 GCGC GCG^C HinP1I 14 GCGC G^CGC Ksp632I 77 CTCTTC CTCTTC(1/4) MboI 21 GATC ^GATC MfeI 577 CAATTG C^AATTG MseI 554 TTAA T^TAA MspA1I 368 CAGCTG C[AC]G^C[GT]G MunI 577 CAATTG C^AATTG MwoI 117 GCTCAGGGAGC GC[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GC NaeI 452 GCCGGC GCC^GGC NdeII 21 GATC ^GATC NgoMIV 452 GCCGGC G^CCGGC NlaIII 271 CATG CATG^ NlaIV 353 GGAGCC GG[ACGT]^[ACGT]CC NspI 270 GCATGT [GA]CATG^[CT] PflFI 394 GACTTGGTC GAC[ACGT]^[ACGT][ACGT]GTC PleI 58 GAGTC GAGTC(4/5) PvuII 368 CAGCTG CAG^CTG SapI 76 GCTCTTC GCTCTTC(1/4) Sau3AI 21 GATC ^GATC Sau96I 102 GGACC G^G[ACGT]CC SspI 130 AATATT AAT^ATT TfiI 428 GAATC G^A[AT]TC Tru9I 554 TTAA T^TAA TspRI 261 CAGTG CA[GC]TG[ACGT][ACGT]^ Tth111I 394 GACTTGGTC GAC[ACGT]^[ACGT][ACGT]GTC ################################### # TWO CUT ENZYMES ( 28 enzymes) # ################################### AccII 241 CGCG CG^CG 433 CGCG AcsI 296 GAATTC [GA]^AATT[CT] 562 GAATTC ApoI 296 GAATTC [GA]^AATT[CT] 562 GAATTC Asp700I 207 GAAATCTTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 252 GAAAAAGTTC BbvI 139 GCAGC GCAGC(8/12) 449 GCAGC BfaI 235 CTAG C^TAG 442 CTAG BpmI 82 CTGGAG CTGGAG(16/14) 88 CTGGAG BsaJI 71 CCCAGG C^C[ACGT][ACGT]GG 349 CCCAGG BssKI 72 CCAGG ^CC[ACGT]GG 350 CCAGG BstF5I 384 CATCC GGATG(2/0) 549 GGATG BstNI 72 CCAGG CC^[AT]GG 350 CCAGG BstUI 241 CGCG CG^CG 433 CGCG EcoRI 296 GAATTC G^AATTC 562 GAATTC EcoRII 72 CCAGG ^CC[AT]GG 350 CCAGG Fnu4HI 139 GCAGC GC^[ACGT]GC 449 GCAGC FokI 384 CATCC GGATG(9/13) 549 GGATG HgaI 345 GCGTC GACGC(5/10) 434 GCGTC HinfI 58 GAGTC G^A[ACGT]TC 428 GAATC ItaI 139 GCAGC GC^[ACGT]GC 449 GCAGC MaeI 235 CTAG C^TAG 442 CTAG MboII 78 TCTTC GAAGA(8/7) 401 TCTTC MvaI 72 CCAGG CC^[AT]GG 350 CCAGG MvnI 241 CGCG CG^CG 433 CGCG ScrFI 72 CCAGG CC^[ACGT]GG 350 CCAGG SfaNI 379 GATGC GCATC(5/9) 65 GCATC SmlI 106 CTCAAG C^T[CT][GA]AG 388 CTTGAG TseI 139 GCAGC G^C[AT]GC 449 GCAGC XmnI 207 GAAATCTTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 252 GAAAAAGTTC ######################################### # 3 OR MORE CUT ENZYMES ( 11 enzymes) # ######################################### AfaI AluI DdeI HapII HpaII MnlI MspI RsaI TaqI Tsp509I TthHB8I