################################## # NO CUT ENZYMES ( 94 enzymes) # ################################## AatII Acc65I AccIII AflII AflIII AgeI Alw44I Aor51HI ApaI ApaLI AscI Asp718I AspI AvaI BbrPI BcgI BciVI BfrI BglI BlpI Bpu1102I BsaBI BsaI BsaWI BseAI BsiEI BsiWI BsoBI BspDI BspEI BspLU11I BsrFI BssHII BssSI Bst1107I BstBI BstEII BstPI BstZ17I CelII Cfr10I ClaI CpoI DrdI EagI EclXI Eco47III Eco52I EcoNI EcoO65I EcoRV FauI FseI HindIII HpaI KpnI KspI MamI MluI MroI NaeI NgoMIV NotI NruI NspV PacI PaeR7I PflFI PflMI PinAI PmaCI PmeI PmlI PvuI RsrII SacII SalI SbfI ScaI SexAI SfiI SfuI SgrAI SmaI SnaBI SpeI Sse8387I StuI Tth111I Van91I XbaI XhoI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 56 enzymes) # ################################### AccII 85 CGCG CG^CG AclI 1136 AACGTT AA^CGTT AcyI 187 GGCGCC G[GA]^CG[CT]C AhdI 535 GACTACAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AseI 2157 ATTAAT AT^TAAT AsnI 2157 ATTAAT AT^TAAT Asp700I 694 GAAAACCTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC AspEI 535 GACTACAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AviII 10 TGCGCA TGC^GCA AvrII 1062 CCTAGG C^CTAGG BamHI 2877 GGATCC G^GATCC BbeI 187 GGCGCC GGCGC^C BbsI 198 GAAGAC GAAGAC(2/6) BclI 2274 TGATCA T^GATCA BcnI 3233 CCCGG CC^[GC]GG BlnI 1062 CCTAGG C^CTAGG BpuAI 198 GAAGAC GAAGAC(2/6) BsaAI 2750 TACGTG [CT]AC^GT[GA] BsaHI 187 GGCGCC G[GA]^CG[CT]C BseRI 97 GAGGAG GAGGAG(10/8) BsmFI 2082 GGGAC GGGAC(10/14) BspHI 177 TCATGA T^CATGA BsrBI 1763 CCGCTC CCGCTC(-3/-3) BstAPI 325 GCATTATCTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC BstUI 85 CGCG CG^CG DraII 1803 AGGACCT [GA]G^G[ACGT]CC[CT] DraIII 1475 CACATGGTG CAC[ACGT][ACGT][ACGT]^GTG Eam1105I 535 GACTACAAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EcoO109I 1803 AGGACCT [GA]G^G[ACGT]CC[CT] EcoRI 1412 GAATTC G^AATTC FbaI 2274 TGATCA T^GATCA FspI 10 TGCGCA TGC^GCA HapII 3234 CCGG C^CGG HgaI 1502 GCGTC GACGC(5/10) Hin1I 187 GGCGCC G[GA]^CG[CT]C HincII 466 GTTGAC GT[CT]^[GA]AC HindII 466 GTTGAC GT[CT]^[GA]AC HpaII 3234 CCGG C^CGG KasI 187 GGCGCC G^GCGCC MspI 3234 CCGG C^CGG MvnI 85 CGCG CG^CG NarI 187 GGCGCC GG^CGCC NciI 3233 CCCGG CC^[GC]GG NheI 2458 GCTAGC G^CTAGC PpuMI 1803 AGGACCT [GA]G^G[AT]CC[CT] PshAI 148 GACAGCCGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC PshBI 2157 ATTAAT AT^TAAT Psp1406I 1136 AACGTT AA^CGTT RcaI 177 TCATGA T^CATGA SapI 1732 GAAGAGC GCTCTTC(1/4) SfoI 187 GGCGCC GGC^GCC SmlI 1094 CTCAAG C^T[CT][GA]AG SspI 2245 AATATT AAT^ATT SwaI 1310 ATTTAAAT ATTT^AAAT XcmI 2204 CCAATGGCAATGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XmnI 694 GAAAACCTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC ################################### # TWO CUT ENZYMES ( 24 enzymes) # ################################### AccI 406 GTCTAC GT^[AC][GT]AC 2443 GTAGAC AlwNI 2114 CAGATGCTG CAG[ACGT][ACGT][ACGT]^CTG 2848 CAGTTGCTG AocI 1961 CCTCAGG CC^T[ACGT]AGG 3170 CCTCAGG BsgI 704 CTGCAC GTGCAG(16/14) 941 GTGCAG BsmBI 154 CGTCTC CGTCTC(1/5) 1503 CGTCTC BsmI 375 GAATGC GAATGC(1/-1) 2990 GAATGC Bsp1407I 1023 TGTACA T^GTACA 2719 TGTACA BsrDI 2210 GCAATG GCAATG(2/0) 2994 GCAATG BsrGI 1023 TGTACA T^GTACA 2719 TGTACA BstXI 2798 CCAAAACTTTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 3198 CCAAAGTGCTGG Bsu36I 1961 CCTCAGG CC^T[ACGT]AGG 3170 CCTCAGG DraI 549 TTTAAA TTT^AAA 1311 TTTAAA Eco81I 1961 CCTCAGG CC^T[ACGT]AGG 3170 CCTCAGG EcoT22I 422 ATGCAT ATGCA^T 745 ATGCAT HaeII 132 GGCGCT [GA]GCGC^[CT] 187 GGCGCC MfeI 1027 CAATTG C^AATTG 2933 CAATTG MunI 1027 CAATTG C^AATTG 2933 CAATTG NdeI 671 CATATG CA^TATG 2827 CATATG NsiI 422 ATGCAT ATGCA^T 745 ATGCAT NspI 1041 GCATGC [GA]CATG^[CT] 2536 GCATGC PvuII 1333 CAGCTG CAG^CTG 2255 CAGCTG SacI 2430 GAGCTC GAGCT^C 2765 GAGCTC SphI 1041 GCATGC GCATG^C 2536 GCATGC SspBI 1023 TGTACA T^GTACA 2719 TGTACA ######################################### # 3 OR MORE CUT ENZYMES ( 84 enzymes) # ######################################### AciI AcsI AfaI AluI AlwI ApoI AspHI AvaII BalI BanI BanII BbvCI BbvI BfaI BglII BmyI BpmI BsaJI BsiHKAI BsiYI BslI BsmAI Bsp1286I BspMI BsrI BssKI BstF5I BstNI BstYI Cac8I CfoI Cfr13I DdeI DpnII DsaI EaeI EarI EcoRII EcoT14I Fnu4HI FokI HaeIII HhaI HinP1I HinfI HphI ItaI Ksp632I MaeI MaeII MaeIII MboI MboII MflI MluNI MnlI MscI MseI MslI MspA1I MvaI MwoI NcoI NdeII NlaIII NlaIV PleI PstI RsaI Sau3AI Sau96I ScrFI SfaNI SfcI StyI TaqI TfiI Tru9I TseI Tsp45I Tsp509I TspRI TthHB8I XhoII