################################## # NO CUT ENZYMES ( 138 enzymes) # ################################## AatII Acc65I AccIII AclI AcsI AflII AgeI AhdI AlwI AocI Aor51HI ApaI ApoI AscI AseI AsnI Asp700I Asp718I AspEI AspI AviII AvrII BamHI BanII BbsI BcgI BciVI BclI BfrI BglI BglII BlnI BlpI Bpu1102I BpuAI BsaBI BsaI BseAI BsiWI BsmAI BsmBI BsmFI Bsp1407I BspDI BspEI BspHI BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstAPI BstBI BstEII BstF5I BstPI BstYI BstZ17I Bsu36I CelII ClaI CpoI DraI DraIII DrdI Eam1105I Eco47III Eco81I EcoNI EcoO65I EcoRI EcoRV EcoT14I EcoT22I FbaI FokI FseI FspI HgaI HindIII HpaI KpnI MamI MfeI MflI MluI MroI MslI MunI NcoI NdeI NotI NruI NsiI NspV PacI PaeR7I PflFI PflMI PinAI PleI PmeI PshAI PshBI Psp1406I PvuI RcaI RsrII SacI SalI SbfI ScaI SexAI SfiI SfuI SgrAI SmaI SmlI SnaBI SpeI Sse8387I SspBI SspI StuI StyI SwaI TaqI Tth111I TthHB8I Van91I XbaI XcmI XhoI XhoII XmaCI XmaI XmnI ################################### # ONE CUT ENZYMES ( 51 enzymes) # ################################### AccI 568 GTCTAC GT^[AC][GT]AC AflIII 17 ACATGT A^C[GA][CT]GT Alw44I 21 GTGCAC G^TGCAC ApaLI 21 GTGCAC G^TGCAC AspHI 21 GTGCAC G[AT]GC[AT]^C AvaI 631 CCCGAG C^[CT]CG[GA]G BalI 449 TGGCCA TGG^CCA BbrPI 403 CACGTG CAC^GTG BbvCI 490 CCTCAGC CCTCAGC(-5/-2) BpmI 263 CTCCAG CTGGAG(16/14) BsaAI 403 CACGTG [CT]AC^GT[GA] BsaWI 152 TCCGGT [AT]^CCGG[AT] BseRI 693 GAGGAG GAGGAG(10/8) BsgI 406 GTGCAG GTGCAG(16/14) BsiEI 87 CGGCCG CG[GA][CT]^CG BsiHKAI 21 GTGCAC G[AT]GC[AT]^C BsmI 320 GCATTC GAATGC(1/-1) BsoBI 631 CCCGAG C^[CT]CG[GA]G BspLU11I 17 ACATGT A^CATGT BspMI 196 GCAGGT ACCTGC(4/8) BsrFI 85 GCCGGC [GA]^CCGG[CT] BsrI 144 ACTGG ACTGG(1/-1) BstXI 122 CCAGCGGCGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG Cfr10I 85 GCCGGC [GA]^CCGG[CT] DraII 683 AGGACCT [GA]G^G[ACGT]CC[CT] EagI 87 CGGCCG C^GGCCG EclXI 87 CGGCCG C^GGCCG Eco52I 87 CGGCCG C^GGCCG EcoO109I 683 AGGACCT [GA]G^G[ACGT]CC[CT] FauI 40 CCCGC CCCGC(4/6) HincII 484 GTTGAC GT[CT]^[GA]AC HindII 484 GTTGAC GT[CT]^[GA]AC HinfI 170 GATTC G^A[ACGT]TC KspI 56 CCGCGG CCGC^GG MluNI 449 TGGCCA TGG^CCA MscI 449 TGGCCA TGG^CCA MseI 701 TTAA T^TAA NaeI 85 GCCGGC GCC^GGC NgoMIV 85 GCCGGC G^CCGGC NheI 507 GCTAGC G^CTAGC PmaCI 403 CACGTG CAC^GTG PmlI 403 CACGTG CAC^GTG PpuMI 683 AGGACCT [GA]G^G[AT]CC[CT] PvuII 307 CAGCTG CAG^CTG SacII 56 CCGCGG CCGC^GG SapI 244 GCTCTTC GCTCTTC(1/4) SfaNI 334 GATGC GCATC(5/9) SphI 515 GCATGC GCATG^C TfiI 170 GATTC G^A[AT]TC Tru9I 701 TTAA T^TAA Tsp509I 556 AATT ^AATT ################################### # TWO CUT ENZYMES ( 28 enzymes) # ################################### AccII 42 CGCG CG^CG 57 CGCG AcyI 79 GGCGCC G[GA]^CG[CT]C 118 GGCGCC AfaI 36 GTAC GT^AC 626 GTAC AlwNI 332 CAGATGCTG CAG[ACGT][ACGT][ACGT]^CTG 682 CAGGACCTG BbeI 79 GGCGCC GGCGC^C 118 GGCGCC BcnI 46 CCGGG CC^[GC]GG 428 CCCGG BmyI 21 GTGCAC G[AGT]GC[ACT]^C 423 GGGCAC BsaHI 79 GGCGCC G[GA]^CG[CT]C 118 GGCGCC Bsp1286I 21 GTGCAC G[AGT]GC[ACT]^C 423 GGGCAC BstUI 42 CGCG CG^CG 57 CGCG DdeI 292 CTGAG C^T[ACGT]AG 491 CTCAG DpnII 105 GATC ^GATC 345 GATC DsaI 56 CCGCGG C^C[GA][CT]GG 110 CCGTGG EaeI 87 CGGCCG [CT]^GGCC[GA] 449 TGGCCA EarI 245 CTCTTC CTCTTC(1/4) 690 GAAGAG Hin1I 79 GGCGCC G[GA]^CG[CT]C 118 GGCGCC KasI 79 GGCGCC G^GCGCC 118 GGCGCC Ksp632I 245 CTCTTC CTCTTC(1/4) 690 GAAGAG MaeII 404 ACGT A^CGT 584 ACGT MboI 105 GATC ^GATC 345 GATC MvnI 42 CGCG CG^CG 57 CGCG NarI 79 GGCGCC GG^CGCC 118 GGCGCC NciI 46 CCGGG CC^[GC]GG 428 CCCGG NdeII 105 GATC ^GATC 345 GATC PstI 297 CTGCAG CTGCA^G 502 CTGCAG RsaI 36 GTAC GT^AC 626 GTAC Sau3AI 105 GATC ^GATC 345 GATC SfoI 79 GGCGCC GGC^GCC 118 GGCGCC ######################################### # 3 OR MORE CUT ENZYMES ( 41 enzymes) # ######################################### AciI AluI AvaII BanI BbvI BfaI BsaJI BsiYI BslI BssKI BstNI Cac8I CfoI Cfr13I EcoRII Fnu4HI HaeII HaeIII HapII HhaI HinP1I HpaII HphI ItaI MaeI MaeIII MboII MnlI MspA1I MspI MvaI MwoI NlaIII NlaIV NspI Sau96I ScrFI SfcI TseI Tsp45I TspRI