################################## # NO CUT ENZYMES ( 86 enzymes) # ################################## AatII Acc65I AccI AclI AcsI AflII AgeI AocI ApoI AscI AseI AsnI Asp718I AvrII BbeI BbrPI BcgI BciVI BfrI BglI BglII BlnI BsaBI BsiWI Bsp1407I BspDI BsrGI BssHII Bst1107I BstEII BstPI BstZ17I Bsu36I ClaI CpoI DraI DraIII Eco81I EcoO65I EcoRI EcoRV EcoT22I FseI HincII HindII HindIII HpaI KasI KpnI MamI MfeI MluI MunI NarI NdeI NheI NotI NruI NsiI PacI PaeR7I PinAI PmaCI PmeI PmlI PpuMI PshBI Psp1406I PstI PvuI RsrII SacI SalI SbfI ScaI SfiI SfoI SgrAI SpeI SphI Sse8387I SspBI SspI SwaI XbaI XhoI ################################### # ONE CUT ENZYMES ( 57 enzymes) # ################################### AccIII 315 TCCGGA T^CCGGA AflIII 883 ACATGT A^C[GA][CT]GT AhdI 1986 GACATCGAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC Alw44I 799 GTGCAC G^TGCAC ApaI 2070 GGGCCC GGGCC^C ApaLI 799 GTGCAC G^TGCAC AspEI 1986 GACATCGAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC AviII 1235 TGCGCA TGC^GCA BalI 1964 TGGCCA TGG^CCA BamHI 1611 GGATCC G^GATCC BclI 728 TGATCA T^GATCA BfaI 1450 CTAG C^TAG BlpI 297 GCTGAGC GC^T[ACGT]AGC Bpu1102I 297 GCTGAGC GC^T[ACGT]AGC BsaAI 609 TACGTA [CT]AC^GT[GA] BseAI 315 TCCGGA T^CCGGA BsgI 1345 CTGCAC GTGCAG(16/14) BsiEI 2093 CGGCCG CG[GA][CT]^CG BsmI 1644 GAATGC GAATGC(1/-1) BspEI 315 TCCGGA T^CCGGA BspHI 1415 TCATGA T^CATGA BspLU11I 883 ACATGT A^CATGT BsrDI 248 CATTGC GCAATG(2/0) BssSI 643 CACGAG CACGAG(-5/-1) BstAPI 2145 GCATGTGCTGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC BstBI 1641 TTCGAA TT^CGAA BstXI 440 CCATGGACCTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG CelII 297 GCTGAGC GC^T[ACGT]AGC DrdI 1317 GACGGGATCGTC GAC[ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EagI 2093 CGGCCG C^GGCCG Eam1105I 1986 GACATCGAGTC GAC[ACGT][ACGT][ACGT]^[ACGT][ACGT]GTC EclXI 2093 CGGCCG C^GGCCG Eco52I 2093 CGGCCG C^GGCCG EcoNI 447 CCTGGTCAAGG CCT[ACGT][ACGT]^[ACGT][ACGT][ACGT]AGG FbaI 728 TGATCA T^GATCA FspI 1235 TGCGCA TGC^GCA KspI 1616 CCGCGG CCGC^GG MaeI 1450 CTAG C^TAG MluNI 1964 TGGCCA TGG^CCA MroI 315 TCCGGA T^CCGGA MscI 1964 TGGCCA TGG^CCA MseI 10 TTAA T^TAA MslI 1359 CATTGATGTG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG NspV 1641 TTCGAA TT^CGAA PflMI 2162 CCAAGGAATGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG PshAI 1908 GACGGAGGTC GAC[ACGT][ACGT]^[ACGT][ACGT]GTC RcaI 1415 TCATGA T^CATGA SacII 1616 CCGCGG CCGC^GG SapI 2106 GAAGAGC GCTCTTC(1/4) SexAI 446 ACCTGGT A^CC[AT]GGT SfuI 1641 TTCGAA TT^CGAA SmlI 1531 CTCAAG C^T[CT][GA]AG SnaBI 609 TACGTA TAC^GTA StuI 434 AGGCCT AGG^CCT Tru9I 10 TTAA T^TAA Van91I 2162 CCAAGGAATGG CCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG XcmI 1653 CCAGTACAAGTATGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG ################################### # TWO CUT ENZYMES ( 37 enzymes) # ################################### AccII 1617 CGCG CG^CG 2091 CGCG AcyI 457 GACGCC G[GA]^CG[CT]C 1554 GGCGTC AfaI 612 GTAC GT^AC 1656 GTAC AlwNI 715 CAGTGGCTG CAG[ACGT][ACGT][ACGT]^CTG 1077 CAGCCGCTG Aor51HI 1091 AGCGCT AGC^GCT 1935 AGCGCT Asp700I 489 GAAGCGGTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 1036 GAAGATGTTC AspHI 799 GTGCAC G[AT]GC[AT]^C 1066 GTGCTC AspI 445 GACCTGGTC GAC[ACGT]^[ACGT][ACGT]GTC 1504 GACGATGTC AvaI 1194 CCCGGG C^[CT]CG[GA]G 2121 CCCGGG BsaHI 457 GACGCC G[GA]^CG[CT]C 1554 GGCGTC BsaI 160 GAGACC GGTCTC(1/5) 837 GAGACC BsaWI 315 TCCGGA [AT]^CCGG[AT] 2018 ACCGGA BsiHKAI 799 GTGCAC G[AT]GC[AT]^C 1066 GTGCTC BsmBI 25 CGTCTC CGTCTC(1/5) 1315 GAGACG BsoBI 1194 CCCGGG C^[CT]CG[GA]G 2121 CCCGGG BspMI 1048 ACCTGC ACCTGC(4/8) 1289 GCAGGT BsrBI 1171 CCGCTC CCGCTC(-3/-3) 1787 GAGCGG BstUI 1617 CGCG CG^CG 2091 CGCG BstYI 206 AGATCC [GA]^GATC[CT] 1611 GGATCC Eco47III 1091 AGCGCT AGC^GCT 1935 AGCGCT HaeII 1091 AGCGCT [GA]GCGC^[CT] 1935 AGCGCT Hin1I 457 GACGCC G[GA]^CG[CT]C 1554 GGCGTC MflI 206 AGATCC [GA]^GATC[CT] 1611 GGATCC MvnI 1617 CGCG CG^CG 2091 CGCG NaeI 1807 GCCGGC GCC^GGC 1865 GCCGGC NcoI 440 CCATGG C^CATGG 1550 CCATGG NgoMIV 1807 GCCGGC G^CCGGC 1865 GCCGGC NspI 883 ACATGT [GA]CATG^[CT] 2145 GCATGT PflFI 445 GACCTGGTC GAC[ACGT]^[ACGT][ACGT]GTC 1504 GACGATGTC RsaI 612 GTAC GT^AC 1656 GTAC SfcI 741 CTACAG C^T[GA][CT]AG 1699 CTACAG SmaI 1194 CCCGGG CCC^GGG 2121 CCCGGG Tth111I 445 GACCTGGTC GAC[ACGT]^[ACGT][ACGT]GTC 1504 GACGATGTC XhoII 206 AGATCC [GA]^GATC[CT] 1611 GGATCC XmaCI 1194 CCCGGG C^CCGGG 2121 CCCGGG XmaI 1194 CCCGGG C^CCGGG 2121 CCCGGG XmnI 489 GAAGCGGTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC 1036 GAAGATGTTC ######################################### # 3 OR MORE CUT ENZYMES ( 78 enzymes) # ######################################### AciI AluI AlwI AvaII BanI BanII BbsI BbvCI BbvI BcnI BmyI BpmI BpuAI BsaJI BseRI BsiYI BslI BsmAI BsmFI Bsp1286I BsrFI BsrI BssKI BstF5I BstNI Cac8I CfoI Cfr10I Cfr13I DdeI DpnII DraII DsaI EaeI EarI EcoO109I EcoRII EcoT14I FauI Fnu4HI FokI HaeIII HapII HgaI HhaI HinP1I HinfI HpaII HphI ItaI Ksp632I MaeII MaeIII MboI MboII MnlI MspA1I MspI MvaI MwoI NciI NdeII NlaIII NlaIV PleI PvuII Sau3AI Sau96I ScrFI SfaNI StyI TaqI TfiI TseI Tsp45I Tsp509I TspRI TthHB8I