################################## # NO CUT ENZYMES ( 125 enzymes) # ################################## AatII Acc65I AccI AccII AclI AcyI AflII AflIII AhdI Alw44I AocI Aor51HI ApaI ApaLI AscI AseI AsnI Asp718I AspEI AvrII BalI BbeI BbrPI BbvCI BciVI BclI BfrI BlnI BlpI Bpu1102I BsaAI BsaHI BsgI BsiEI BsiWI BsmBI BspDI BspHI BspLU11I BspMI BsrDI BssHII Bst1107I BstAPI BstBI BstEII BstPI BstUI BstZ17I Bsu36I CelII ClaI CpoI DraIII DrdI EaeI EagI Eam1105I EclXI Eco47III Eco52I Eco81I EcoNI EcoO65I FbaI FseI Hin1I HindIII HpaI KasI KpnI KspI MaeII MluI MluNI MscI MvnI NaeI NarI NcoI NdeI NgoMIV NheI NotI NruI NspI NspV PacI PaeR7I PflMI PmaCI PmeI PmlI PpuMI PshAI PshBI Psp1406I PstI PvuI RcaI RsrII SacII SalI SbfI ScaI SexAI SfcI SfiI SfoI SfuI SgrAI SmaI SnaBI SpeI SphI Sse8387I SspI StuI SwaI Van91I XbaI XcmI XhoI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 50 enzymes) # ################################### AgeI 345 ACCGGT A^CCGGT AlwNI 581 CAGCTTCTG CAG[ACGT][ACGT][ACGT]^CTG AspI 892 GACCTTGTC GAC[ACGT]^[ACGT][ACGT]GTC AvaI 237 CTCGGG C^[CT]CG[GA]G AvaII 653 GGTCC G^G[AT]CC AviII 1479 TGCGCA TGC^GCA BamHI 3 GGATCC G^GATCC BanI 58 GGTGCC G^G[CT][GA]CC BbvI 580 GCAGC GCAGC(8/12) BcgI 1317 CGAGCGTCGTGC (10/12)CGA[ACGT][ACGT][ACGT][ACGT][ACGT][ACGT]TGC(12/10) BfaI 1169 CTAG C^TAG BglI 61 GCCTTGATGGC GCC[ACGT][ACGT][ACGT][ACGT]^[ACGT]GGC BglII 446 AGATCT A^GATCT BpmI 253 CTGGAG CTGGAG(16/14) BsaBI 734 GATATCAATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC BsmFI 18 GTCCC GGGAC(10/14) BsoBI 237 CTCGGG C^[CT]CG[GA]G Bsp1407I 438 TGTACA T^GTACA BsrBI 1393 GAGCGG CCGCTC(-3/-3) BsrFI 345 ACCGGT [GA]^CCGG[CT] BsrGI 438 TGTACA T^GTACA BssSI 11 CACGAG CACGAG(-5/-1) BstXI 1286 CCATCCGTGTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG Cfr10I 345 ACCGGT [GA]^CCGG[CT] DraI 480 TTTAAA TTT^AAA DraII 411 AGGCCCC [GA]G^G[ACGT]CC[CT] DsaI 1507 CCGTGG C^C[GA][CT]GG EcoO109I 411 AGGCCCC [GA]G^G[ACGT]CC[CT] EcoRI 638 GAATTC G^AATTC EcoRV 734 GATATC GAT^ATC EcoT14I 656 CCAAGG C^C[AT][AT]GG EcoT22I 327 ATGCAT ATGCA^T Fnu4HI 580 GCAGC GC^[ACGT]GC FspI 1479 TGCGCA TGC^GCA HaeII 1376 GGCGCT [GA]GCGC^[CT] HincII 1143 GTCAAC GT[CT]^[GA]AC HindII 1143 GTCAAC GT[CT]^[GA]AC ItaI 580 GCAGC GC^[ACGT]GC MaeI 1169 CTAG C^TAG MamI 734 GATATCAATC GAT[ACGT][ACGT]^[ACGT][ACGT]ATC MfeI 431 CAATTG C^AATTG MunI 431 CAATTG C^AATTG NsiI 327 ATGCAT ATGCA^T PflFI 892 GACCTTGTC GAC[ACGT]^[ACGT][ACGT]GTC PinAI 345 ACCGGT A^CCGGT SapI 1069 GAAGAGC GCTCTTC(1/4) SspBI 438 TGTACA T^GTACA StyI 656 CCAAGG C^C[AT][AT]GG TseI 580 GCAGC G^C[AT]GC Tth111I 892 GACCTTGTC GAC[ACGT]^[ACGT][ACGT]GTC ################################### # TWO CUT ENZYMES ( 28 enzymes) # ################################### AccIII 969 TCCGGA T^CCGGA 1001 TCCGGA AfaI 277 GTAC GT^AC 439 GTAC AspHI 196 GAGCTC G[AT]GC[AT]^C 298 GAGCTC BcnI 47 CCCGG CC^[GC]GG 1355 CCCGG BsaI 42 GAGACC GGTCTC(1/5) 1367 GAGACC BseAI 969 TCCGGA T^CCGGA 1001 TCCGGA BsiHKAI 196 GAGCTC G[AT]GC[AT]^C 298 GAGCTC BsmI 325 GAATGC GAATGC(1/-1) 860 GAATGC BspEI 969 TCCGGA T^CCGGA 1001 TCCGGA BstYI 3 GGATCC [GA]^GATC[CT] 446 AGATCT CfoI 1377 GCGC GCG^C 1480 GCGC FauI 140 CCCGC CCCGC(4/6) 167 CCCGC HgaI 16 GCGTC GACGC(5/10) 1320 GCGTC HhaI 1377 GCGC GCG^C 1480 GCGC HinP1I 1377 GCGC G^CGC 1480 GCGC MflI 3 GGATCC [GA]^GATC[CT] 446 AGATCT MroI 969 TCCGGA T^CCGGA 1001 TCCGGA MslI 615 CATCAGTATG CA[CT][ACGT][ACGT]^[ACGT][ACGT][GA]TG 1287 CATCCGTGTG MspA1I 900 CAGCTG C[AC]G^C[GT]G 1257 CAGCTG NciI 47 CCCGG CC^[GC]GG 1355 CCCGG PvuII 900 CAGCTG CAG^CTG 1257 CAGCTG RsaI 277 GTAC GT^AC 439 GTAC SacI 196 GAGCTC GAGCT^C 298 GAGCTC SmlI 24 CTTGAG C^T[CT][GA]AG 80 CTCAAG TaqI 305 TCGA T^CGA 323 TCGA TfiI 205 GATTC G^A[AT]TC 1404 GATTC TthHB8I 305 TCGA T^CGA 323 TCGA XhoII 3 GGATCC [GA]^GATC[CT] 446 AGATCT ######################################### # 3 OR MORE CUT ENZYMES ( 55 enzymes) # ######################################### AciI AcsI AluI AlwI ApoI Asp700I BanII BbsI BmyI BpuAI BsaJI BsaWI BseRI BsiYI BslI BsmAI Bsp1286I BsrI BssKI BstF5I BstNI Cac8I Cfr13I DdeI DpnII EarI EcoRII FokI HaeIII HapII HinfI HpaII HphI Ksp632I MaeIII MboI MboII MnlI MseI MspI MvaI MwoI NdeII NlaIII NlaIV PleI Sau3AI Sau96I ScrFI SfaNI Tru9I Tsp45I Tsp509I TspRI XmnI