OTOP3 ORF clone FHC02353

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC02353

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Clone info.

Species

human

Clone Name

pFN21AB7247 Sequence (with vector) Restriction Map

Product ID

FHC02353

Flexi Clone PID

FXC02353

ORF Sequence

DNA sequence (1788 bp)
Protein sequence (596 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463989]

Gene

KIBB7247

Symbol

OTOP3

Description

otopetrin 3, transcript variant 1

Original Clone ID

oc00463

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1788 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 596 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11709.1 0 100.0 OTOP3 CCDS11708.1 1.5e-30 43.0 OTOP2 CCDS3372.1 3e-13 32.1 OTOP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004878 277 480 PF03189 Otopetrin IPR004878 524 582 PF03189 Otopetrin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 86 AGQLFSGLLALNVVFLGGAFICS 108 PRIMARY 23 2 117 TLGDVWILLATLKVLSLLWLLYY 139 PRIMARY 23 3 160 LWVRGSLVLFGSCTFCLNIFRVG 182 SECONDARY 23 4 191 KSQLDLVFSVIEMVFIGVQTWVL 213 PRIMARY 23 5 229 RCGLMLTLATNLLLWVLAVTNDS 251 SECONDARY 23 6 292 MLYPFSTEYCLICCAVLFVMWKN 314 PRIMARY 23 7 338 IFGPLLGLLVLLAGVCVFVLFQI 360 PRIMARY 23 8 372 FTLYYAFYVAVLPTMSLACLAGT 394 PRIMARY 23 9 416 VVLLMGAALGQMGIAYFSIVAIV 438 SECONDARY 23 10 448 RLILAYSLLLILQHIAQNLFIIE 470 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_839947 596 607828 100.0 100.0 XP_011523046 567 607828 99.6 94.8 NP_001258934 578 607828 98.6 95.1 XP_011523781 562 607827 43.0 85.7 NP_835454 562 607827 43.0 85.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7247 Download

>KIBB7247  1788 bp
ATGGGCCGCGGAGCCCGAGCGGCGGCTGCGCAGTCCCGCTGGGGGAGGGCGTCGCGGGCA
TCGGTCTCACCTGGACGGACGATCCGCTCAGCGCCCGCAGTCGGTGAAGCACAGGAGACT
GAAGCAGCCCCGGAGAAGGAGAACCGAGTGGATGTGGGGGCCGAGGAGAGAGCGGCCGCC
ACCCGGCCCCGGCAGAAGTCCTGGCTGGTGAGGCATTTCTCTCTGCTGCTGCGGCGGGAC
CGGCAGGCCCAGAAGGCTGGACAACTCTTCTCGGGGCTCCTGGCCCTGAATGTGGTGTTC
CTGGGTGGCGCCTTCATCTGCAGCATGATCTTCAACAAGGTGGCCGTCACTCTGGGTGAC
GTGTGGATCCTGCTGGCCACGCTGAAGGTCCTCTCCCTGCTTTGGCTTCTCTACTATGTG
GCAAGCACCACCCGCCGACCACACGCCGTGCTCTACCAAGATCCCCACGCGGGGCCCCTC
TGGGTGCGGGGTTCCCTAGTGCTCTTCGGCAGCTGCACCTTCTGCCTCAACATCTTCCGA
GTGGGCTACGATGTGAGCCACATCCGCTGCAAGTCACAGCTGGACCTTGTCTTCTCTGTC
ATCGAGATGGTCTTCATCGGCGTCCAGACCTGGGTGCTCTGGAAACACTGCAAAGACTGT
GTTCGGGTCCAGACCAACTTCACTAGGTGTGGCCTGATGCTGACCCTGGCCACAAACCTG
CTGCTGTGGGTTCTGGCCGTTACCAATGACTCCATGCACCGAGAGATCGAAGCTGAGCTT
GGCATCCTCATGGAAAAATCCACAGGCAATGAGACCAACACCTGTCTGTGCCTCAATGCC
ACCGCGTGTGAAGCTTTCCGGAGAGGCTTCCTGATGCTCTACCCCTTCAGCACTGAGTAC
TGCCTCATCTGCTGTGCTGTGCTGTTTGTCATGTGGAAGAACGTGGGCCGCCACGTGGCA
CCCCACATGGGTGCCCACCCTGCCACCGCACCCTTCCACCTGCACGGGGCCATCTTCGGG
CCGCTGCTGGGCCTGCTGGTGCTGCTGGCAGGTGTGTGCGTCTTTGTGCTCTTCCAAATC
GAGGCCAGTGGCCCTGCCATTGCTTGCCAGTACTTCACCCTCTACTATGCCTTCTATGTG
GCTGTGCTGCCCACCATGAGTCTGGCGTGCCTGGCGGGCACAGCCATACACGGGCTGGAG
GAGAGAGAGCTGGACACGGTCAAGAACCCTACCCGCAGCCTGGATGTGGTGCTGCTAATG
GGTGCTGCACTGGGCCAGATGGGCATCGCCTATTTCTCCATCGTGGCCATTGTGGCCAAG
CGCCCGCATGAGCTGCTCAACCGCCTCATCCTGGCCTACTCGCTGCTGCTCATCCTGCAG
CACATCGCTCAGAACCTCTTCATCATCGAGGGCCTGCACCGGCGCCCACTCTGGGAGACA
GTTCCCGAGGGCCTGGCAGGAAAGCAGGAGGCTGAGCCTCCCCGCAGAGGCTCCTTGCTG
GAGCTGGGCCAGGGCCTGCAGCGGGCCTCACTGGCCTACATCCACTCCTACAGCCACCTC
AACTGGAAGCGGAGGGCACTCAAGGAGATCTCACTCTTCCTCATCCTCTGCAATATCACA
CTGTGGATGATGCCTGCATTTGGCATACACCCGGAGTTTGAGAACGGGCTAGAAAAGGAT
TTCTACGGCTACCAGATATGGTTCGCCATCGTCAACTTCGGCCTGCCTCTGGGGGTCTTC
TACCGCATGCACTCTGTGGGAGGCCTGGTGGAGGTCTACCTGGGGGCC

ORF Protein

Cloned ORF protein sequence for pFN21AB7247 Download

>KIBB7247  596 aa
MGRGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAA
TRPRQKSWLVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGD
VWILLATLKVLSLLWLLYYVASTTRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFR
VGYDVSHIRCKSQLDLVFSVIEMVFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNL
LLWVLAVTNDSMHREIEAELGILMEKSTGNETNTCLCLNATACEAFRRGFLMLYPFSTEY
CLICCAVLFVMWKNVGRHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQI
EASGPAIACQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLM
GAALGQMGIAYFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWET
VPEGLAGKQEAEPPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFLILCNIT
LWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYLGA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7247 Download

>pFN21AB7247  6493 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGGCCGCGGAGCCCGAGCGGCGGCTGCGCAGTC
CCGCTGGGGGAGGGCGTCGCGGGCATCGGTCTCACCTGGACGGACGATCCGCTCAGCGCC
CGCAGTCGGTGAAGCACAGGAGACTGAAGCAGCCCCGGAGAAGGAGAACCGAGTGGATGT
GGGGGCCGAGGAGAGAGCGGCCGCCACCCGGCCCCGGCAGAAGTCCTGGCTGGTGAGGCA
TTTCTCTCTGCTGCTGCGGCGGGACCGGCAGGCCCAGAAGGCTGGACAACTCTTCTCGGG
GCTCCTGGCCCTGAATGTGGTGTTCCTGGGTGGCGCCTTCATCTGCAGCATGATCTTCAA
CAAGGTGGCCGTCACTCTGGGTGACGTGTGGATCCTGCTGGCCACGCTGAAGGTCCTCTC
CCTGCTTTGGCTTCTCTACTATGTGGCAAGCACCACCCGCCGACCACACGCCGTGCTCTA
CCAAGATCCCCACGCGGGGCCCCTCTGGGTGCGGGGTTCCCTAGTGCTCTTCGGCAGCTG
CACCTTCTGCCTCAACATCTTCCGAGTGGGCTACGATGTGAGCCACATCCGCTGCAAGTC
ACAGCTGGACCTTGTCTTCTCTGTCATCGAGATGGTCTTCATCGGCGTCCAGACCTGGGT
GCTCTGGAAACACTGCAAAGACTGTGTTCGGGTCCAGACCAACTTCACTAGGTGTGGCCT
GATGCTGACCCTGGCCACAAACCTGCTGCTGTGGGTTCTGGCCGTTACCAATGACTCCAT
GCACCGAGAGATCGAAGCTGAGCTTGGCATCCTCATGGAAAAATCCACAGGCAATGAGAC
CAACACCTGTCTGTGCCTCAATGCCACCGCGTGTGAAGCTTTCCGGAGAGGCTTCCTGAT
GCTCTACCCCTTCAGCACTGAGTACTGCCTCATCTGCTGTGCTGTGCTGTTTGTCATGTG
GAAGAACGTGGGCCGCCACGTGGCACCCCACATGGGTGCCCACCCTGCCACCGCACCCTT
CCACCTGCACGGGGCCATCTTCGGGCCGCTGCTGGGCCTGCTGGTGCTGCTGGCAGGTGT
GTGCGTCTTTGTGCTCTTCCAAATCGAGGCCAGTGGCCCTGCCATTGCTTGCCAGTACTT
CACCCTCTACTATGCCTTCTATGTGGCTGTGCTGCCCACCATGAGTCTGGCGTGCCTGGC
GGGCACAGCCATACACGGGCTGGAGGAGAGAGAGCTGGACACGGTCAAGAACCCTACCCG
CAGCCTGGATGTGGTGCTGCTAATGGGTGCTGCACTGGGCCAGATGGGCATCGCCTATTT
CTCCATCGTGGCCATTGTGGCCAAGCGCCCGCATGAGCTGCTCAACCGCCTCATCCTGGC
CTACTCGCTGCTGCTCATCCTGCAGCACATCGCTCAGAACCTCTTCATCATCGAGGGCCT
GCACCGGCGCCCACTCTGGGAGACAGTTCCCGAGGGCCTGGCAGGAAAGCAGGAGGCTGA
GCCTCCCCGCAGAGGCTCCTTGCTGGAGCTGGGCCAGGGCCTGCAGCGGGCCTCACTGGC
CTACATCCACTCCTACAGCCACCTCAACTGGAAGCGGAGGGCACTCAAGGAGATCTCACT
CTTCCTCATCCTCTGCAATATCACACTGTGGATGATGCCTGCATTTGGCATACACCCGGA
GTTTGAGAACGGGCTAGAAAAGGATTTCTACGGCTACCAGATATGGTTCGCCATCGTCAA
CTTCGGCCTGCCTCTGGGGGTCTTCTACCGCATGCACTCTGTGGGAGGCCTGGTGGAGGT
CTACCTGGGGGCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGAC
CTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTG
CTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATG
ATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTT
ATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAA
GTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTT
TTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTT
GCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCAC
CGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGG
GGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGT
ATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTT
GCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTG
GGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAA
CGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATT
GACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAG
TACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGA
CCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGT
TGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTA
GCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGG
CAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCC
CTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGT
ATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACG
GGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTG
ATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACT
CAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAG
CAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATA
GGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACC
CGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTG
TTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGC
TTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGG
GCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTC
TTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGA
TTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACG
GCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAA
AAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTG
TTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTT
CTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGAT
TATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTG
GATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGG
GGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGG
CGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGAT
CGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTG
TCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAG
AGGATCGAGATCT