YIPF3 ORF clone FHC02893

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC02893

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Clone info.

Species

human

Clone Name

pFN21AB8624 Sequence (with vector) Restriction Map

Product ID

FHC02893

Flexi Clone PID

FXC02893

ORF Sequence

DNA sequence (1050 bp)
Protein sequence (350 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463356]

Gene

KIBB8624

Symbol

YIPF3

Alias : C6orf109, FinGER3, KLIP1, dJ337H4.3

Description

Yip1 domain family, member 3

Original Clone ID

oc00281

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1050 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 350 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4899.1 3e-142 99.7 YIPF3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition None - - - - -
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 151 GELYGPLMLVFTLVAILLHGMKT 173 PRIMARY 23 2 183 LMGTAIGTCFGYWLGVSSFIYFL 205 PRIMARY 23 3 213 ITMLQVLALLGYGLFGHCIVLFI 235 PRIMARY 23 4 244 LFYLFWLLVGGLSTLRMVAVLVS 266 PRIMARY 23 5 273 QRLLLCGTLAALHMLFLLYLHFA 295 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056203 350 609775 99.7 100.0 XP_005249047 315 609775 99.7 90.0 XP_011512760 315 609775 99.7 90.0 XP_005249046 315 609775 99.7 90.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB8624 Download

>KIBB8624  1050 bp
ATGGCAACTACAGCGGCGCCGGCGGGCGGCGCCCGAAATGGAGCTGGCCCGGAATGGGGA
GGGTTCGAAGAAAACATCCAGGGCGGAGGCTCAGCTGTGATTGACATGGAGAACATGGAT
GATACCTCAGGCTCTAGCTTCGAGGATATGGGTGAGCTGCATCAGCGCCTGCGCGAGGAA
GAAGTAGACGCTGATGCAGCTGATGCAGCTGCTGCTGAAGAGGAGGATGGAGAGTTCCTG
GGCATGAAGGGCTTTAAGGGACAGCTGAGCCGGCAGGTGGCAGATCAGATGTGGCAGGCT
GGGAAAAGACAAGCCTCCAGGGCCTTCAGCTTGTACGCCAACATCGACATCCTCAGACCC
TACTTTGATGTGGAGCCTGCTCAGGTGCGAAGCAGGCTCCTGGAGTCCATGATCCCTATC
AAGATGGTCAACTTCCCCCAGAAAATTGCAGGTGAACTCTATGGACCTCTCATGCTGGTC
TTCACTCTGGTTGCTATCCTACTCCATGGGATGAAGACGTCTGACACTATTATCCGGGAG
GGCACCCTGATGGGCACAGCCATTGGCACCTGCTTCGGCTACTGGCTGGGAGTCTCATCC
TTCATTTACTTCCTTGCCTACCTGTGCAACGCCCAGATCACCATGCTGCAGGTGTTGGCA
CTGCTGGGCTATGGCCTCTTTGGGCATTGCATTGTCCTGTTCATCACCTATAATATCCAC
CTCCACGCCCTCTTCTACCTCTTCTGGCTGTTGGTGGGTGGACTGTCCACACTGCGCATG
GTAGCAGTGTTGGTGTCTCGGACCGTGGGCCCCACACAGCGGCTGCTCCTCTGTGGCACC
CTGGCTGCCCTACACATGCTCTTCCTGCTCTATCTGCATTTTGCCTACCACAAAGTGGTA
GAGGGGATCCTGGACACACTGGAGGGCCCCAACATCCCGCCCATCCAGAGGGTCCCCAGA
GACATCCCTGCCATGCTCCCTGCTGCTCGGCTTCCCACCACCGTCCTCAACGCCACAGCC
AAAGCTGTTGCGGTGACCCTGCAGTCACAC

ORF Protein

Cloned ORF protein sequence for pFN21AB8624 Download

>KIBB8624  350 aa
MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE
EVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP
YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIRE
GTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQVLALLGYGLFGHCIVLFITYNIH
LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVV
EGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB8624 Download

>pFN21AB8624  5755 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCAACTACAGCGGCGCCGGCGGGCGGCGCCCG
AAATGGAGCTGGCCCGGAATGGGGAGGGTTCGAAGAAAACATCCAGGGCGGAGGCTCAGC
TGTGATTGACATGGAGAACATGGATGATACCTCAGGCTCTAGCTTCGAGGATATGGGTGA
GCTGCATCAGCGCCTGCGCGAGGAAGAAGTAGACGCTGATGCAGCTGATGCAGCTGCTGC
TGAAGAGGAGGATGGAGAGTTCCTGGGCATGAAGGGCTTTAAGGGACAGCTGAGCCGGCA
GGTGGCAGATCAGATGTGGCAGGCTGGGAAAAGACAAGCCTCCAGGGCCTTCAGCTTGTA
CGCCAACATCGACATCCTCAGACCCTACTTTGATGTGGAGCCTGCTCAGGTGCGAAGCAG
GCTCCTGGAGTCCATGATCCCTATCAAGATGGTCAACTTCCCCCAGAAAATTGCAGGTGA
ACTCTATGGACCTCTCATGCTGGTCTTCACTCTGGTTGCTATCCTACTCCATGGGATGAA
GACGTCTGACACTATTATCCGGGAGGGCACCCTGATGGGCACAGCCATTGGCACCTGCTT
CGGCTACTGGCTGGGAGTCTCATCCTTCATTTACTTCCTTGCCTACCTGTGCAACGCCCA
GATCACCATGCTGCAGGTGTTGGCACTGCTGGGCTATGGCCTCTTTGGGCATTGCATTGT
CCTGTTCATCACCTATAATATCCACCTCCACGCCCTCTTCTACCTCTTCTGGCTGTTGGT
GGGTGGACTGTCCACACTGCGCATGGTAGCAGTGTTGGTGTCTCGGACCGTGGGCCCCAC
ACAGCGGCTGCTCCTCTGTGGCACCCTGGCTGCCCTACACATGCTCTTCCTGCTCTATCT
GCATTTTGCCTACCACAAAGTGGTAGAGGGGATCCTGGACACACTGGAGGGCCCCAACAT
CCCGCCCATCCAGAGGGTCCCCAGAGACATCCCTGCCATGCTCCCTGCTGCTCGGCTTCC
CACCACCGTCCTCAACGCCACAGCCAAAGCTGTTGCGGTGACCCTGCAGTCACACGTTTA
AACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTG
ATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAAT
AACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAG
TTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGAT
GCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGC
ATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAAC
CTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTT
GTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCT
TTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACC
CCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCC
TGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTC
GCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTG
GTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGAT
CTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGC
ACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAA
CTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAA
AAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGT
GATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCT
TTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAAT
GAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTG
CGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGG
ATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTT
ATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGG
CCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATG
GATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTC
GAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGT
TATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGG
CCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACG
AGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGAT
ACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTA
CCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCT
GTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCC
CCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAA
GACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATG
TAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAG
TATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTT
GATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTA
CGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTC
AGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCA
CCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGA
TGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTAC
CCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTT
TCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTA
GCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATC
GAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT