KPNA3 ORF clone FHC08897

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC08897

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Clone info.

Species

human

Clone Name

pFN21AB5888 Sequence (with vector) Restriction Map

Product ID

FHC08897

Flexi Clone PID

FXC08897

ORF Sequence

DNA sequence (1563 bp)
Protein sequence (521 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528414]

Gene

KIBB5888

Symbol

KPNA3

Alias : IPOA4, SRP1, SRP1gamma, SRP4, hSRP1

Description

karyopherin alpha 3 (importin alpha 4)

Original Clone ID

cs00588

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1563 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 521 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9421.1 8.8e-207 100.0 KPNA3 CCDS3191.1 3.8e-181 85.8 KPNA4 CCDS32713.1 6.9e-99 49.8 KPNA2 CCDS352.1 7.8e-91 48.5 KPNA6 CCDS47651.1 4.1e-84 45.5 KPNA7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002652 4 93 PF01749 Importin-alpha-like IPR000225 104 144 PF00514 Armadillo IPR000225 147 184 PF00514 Armadillo IPR000225 189 229 PF00514 Armadillo IPR000225 233 271 PF00514 Armadillo IPR000225 274 312 PF00514 Armadillo IPR000225 315 355 PF00514 Armadillo IPR000225 357 396 PF00514 Armadillo IPR000225 402 438 PF00514 Armadillo HMMSmart IPR000225 103 144 SM00185 Armadillo IPR000225 146 186 SM00185 Armadillo IPR000225 188 229 SM00185 Armadillo IPR000225 232 271 SM00185 Armadillo IPR000225 273 313 SM00185 Armadillo IPR000225 315 355 SM00185 Armadillo IPR000225 357 397 SM00185 Armadillo IPR000225 400 440 SM00185 Armadillo ProfileScan IPR002652 1 58 PS51214 Importin-alpha-like IPR000225 114 158 PS50176 Armadillo IPR000225 157 184 PS50176 Armadillo IPR000225 284 322 PS50176 Armadillo
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002258 521 601892 100.0 100.0 XP_016876050 497 601892 100.0 95.4 NP_002259 521 602970 85.8 100.0 NP_002257 529 600685 49.8 99.6 NP_001307540 529 600685 49.8 99.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5888 Download

>KIBB5888  1563 bp
ATGGCCGAGAACCCCAGCTTGGAGAACCACCGCATCAAGAGCTTCAAGAACAAGGGCCGC
GATGTGGAAACAATGCGAAGACATAGAAATGAAGTGACAGTGGAACTGCGGAAGAACAAA
AGAGATGAACACTTATTGAAAAAGAGAAATGTTCCCCAAGAAGAAAGTCTAGAAGATTCA
GATGTTGATGCTGATTTTAAAGCACAAAATGTAACCCTAGAAGCTATATTGCAGAATGCC
ACAAGTGATAACCCAGTGGTCCAATTGAGTGCTGTCCAGGCAGCAAGAAAACTGTTATCC
AGTGACAGAAATCCACCGATTGATGACTTAATAAAATCTGGGATTTTACCAATTCTAGTC
AAATGTCTAGAAAGGGATGATAATCCTTCATTACAGTTTGAAGCTGCTTGGGCATTAACT
AACATAGCATCAGGAACTTCTGCACAGACTCAAGCTGTTGTGCAGTCTAATGCAGTACCT
CTTTTTCTGAGACTTCTTCGTTCACCACATCAGAATGTTTGTGAACAAGCAGTATGGGCT
TTGGGAAACATTATAGGTGATGGTCCTCAATGTAGAGATTATGTCATATCACTGGGAGTT
GTCAAACCTCTTCTGTCCTTCATCAGTCCCTCCATCCCCATCACCTTCCTTCGGAACGTC
ACATGGGTCATTGTCAATCTCTGCAGGAATAAGGATCCCCCACCGCCTATGGAGACAGTT
CAGGAGATTTTGCCAGCTTTATGTGTCCTCATATACCATACAGATATAAACATTCTTGTA
GACACTGTTTGGGCTCTGTCATACTTGACAGATGGAGGTAATGAACAGATACAGATGGTT
ATTGATTCAGGAGTTGTGCCCTTTCTTGTGCCCCTTCTGAGCCATCAGGAAGTCAAAGTT
CAAACAGCAGCCCTCAGAGCAGTTGGCAACATAGTGACTGGCACCGACGAGCAGACCCAG
GTTGTTCTCAATTGTGATGTCCTGTCACACTTCCCAAATCTCTTATCACACCCAAAAGAG
AAGATAAATAAGGAAGCAGTGTGGTTCCTTTCCAACATAACAGCAGGCAACCAGCAACAA
GTTCAAGCTGTAATAGATGCTGGATTAATTCCTATGATAATTCATCAGCTTGCTAAGGGG
GACTTTGGAACACAAAAAGAAGCTGCTTGGGCAATCAGCAACTTAACAATAAGTGGCAGA
AAAGATCAGGTTGAGTACCTTGTACAGCAGAATGTAATACCACCGTTCTGTAATTTACTG
TCAGTGAAAGATTCTCAAGTGGTTCAGGTGGTTCTAGATGGTCTAAAAAACATTCTGATA
ATGGCCGGTGATGAAGCAAGCACAATAGCTGAAATAATAGAGGAATGTGGAGGTTTGGAG
AAAATTGAAGTTTTACAGCAACATGAAAATGAAGACATATATAAATTAGCATTTGAAATC
ATAGATCAGTATTTCTCTGGTGATGATATTGATGAAGATCCCTGCCTCATTCCTGAAGCA
ACACAAGGAGGTACCTACAATTTTGATCCAACAGCCAACCTTCAAACAAAAGAATTTAAT
TTT

ORF Protein

Cloned ORF protein sequence for pFN21AB5888 Download

>KIBB5888  521 aa
MAENPSLENHRIKSFKNKGRDVETMRRHRNEVTVELRKNKRDEHLLKKRNVPQEESLEDS
DVDADFKAQNVTLEAILQNATSDNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILV
KCLERDDNPSLQFEAAWALTNIASGTSAQTQAVVQSNAVPLFLRLLRSPHQNVCEQAVWA
LGNIIGDGPQCRDYVISLGVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPMETV
QEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEVKV
QTAALRAVGNIVTGTDEQTQVVLNCDVLSHFPNLLSHPKEKINKEAVWFLSNITAGNQQQ
VQAVIDAGLIPMIIHQLAKGDFGTQKEAAWAISNLTISGRKDQVEYLVQQNVIPPFCNLL
SVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGGLEKIEVLQQHENEDIYKLAFEI
IDQYFSGDDIDEDPCLIPEATQGGTYNFDPTANLQTKEFNF

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5888 Download

>pFN21AB5888  6268 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCCGAGAACCCCAGCTTGGAGAACCACCGCAT
CAAGAGCTTCAAGAACAAGGGCCGCGATGTGGAAACAATGCGAAGACATAGAAATGAAGT
GACAGTGGAACTGCGGAAGAACAAAAGAGATGAACACTTATTGAAAAAGAGAAATGTTCC
CCAAGAAGAAAGTCTAGAAGATTCAGATGTTGATGCTGATTTTAAAGCACAAAATGTAAC
CCTAGAAGCTATATTGCAGAATGCCACAAGTGATAACCCAGTGGTCCAATTGAGTGCTGT
CCAGGCAGCAAGAAAACTGTTATCCAGTGACAGAAATCCACCGATTGATGACTTAATAAA
ATCTGGGATTTTACCAATTCTAGTCAAATGTCTAGAAAGGGATGATAATCCTTCATTACA
GTTTGAAGCTGCTTGGGCATTAACTAACATAGCATCAGGAACTTCTGCACAGACTCAAGC
TGTTGTGCAGTCTAATGCAGTACCTCTTTTTCTGAGACTTCTTCGTTCACCACATCAGAA
TGTTTGTGAACAAGCAGTATGGGCTTTGGGAAACATTATAGGTGATGGTCCTCAATGTAG
AGATTATGTCATATCACTGGGAGTTGTCAAACCTCTTCTGTCCTTCATCAGTCCCTCCAT
CCCCATCACCTTCCTTCGGAACGTCACATGGGTCATTGTCAATCTCTGCAGGAATAAGGA
TCCCCCACCGCCTATGGAGACAGTTCAGGAGATTTTGCCAGCTTTATGTGTCCTCATATA
CCATACAGATATAAACATTCTTGTAGACACTGTTTGGGCTCTGTCATACTTGACAGATGG
AGGTAATGAACAGATACAGATGGTTATTGATTCAGGAGTTGTGCCCTTTCTTGTGCCCCT
TCTGAGCCATCAGGAAGTCAAAGTTCAAACAGCAGCCCTCAGAGCAGTTGGCAACATAGT
GACTGGCACCGACGAGCAGACCCAGGTTGTTCTCAATTGTGATGTCCTGTCACACTTCCC
AAATCTCTTATCACACCCAAAAGAGAAGATAAATAAGGAAGCAGTGTGGTTCCTTTCCAA
CATAACAGCAGGCAACCAGCAACAAGTTCAAGCTGTAATAGATGCTGGATTAATTCCTAT
GATAATTCATCAGCTTGCTAAGGGGGACTTTGGAACACAAAAAGAAGCTGCTTGGGCAAT
CAGCAACTTAACAATAAGTGGCAGAAAAGATCAGGTTGAGTACCTTGTACAGCAGAATGT
AATACCACCGTTCTGTAATTTACTGTCAGTGAAAGATTCTCAAGTGGTTCAGGTGGTTCT
AGATGGTCTAAAAAACATTCTGATAATGGCCGGTGATGAAGCAAGCACAATAGCTGAAAT
AATAGAGGAATGTGGAGGTTTGGAGAAAATTGAAGTTTTACAGCAACATGAAAATGAAGA
CATATATAAATTAGCATTTGAAATCATAGATCAGTATTTCTCTGGTGATGATATTGATGA
AGATCCCTGCCTCATTCCTGAAGCAACACAAGGAGGTACCTACAATTTTGATCCAACAGC
CAACCTTCAAACAAAAGAATTTAATTTTGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT