ST8SIA3 ORF clone FXC02099

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Flexi ORF Clone FXC02099

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Clone info.

Species

human

Clone Name

pF1KB3501 Sequence (with vector) Restriction Map

Product ID

FXC02099

HaloTag Clone PID

FHC02099

ORF Sequence

DNA sequence (1140 bp)
Protein sequence (380 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463290]

Gene

KIBB3501

Symbol

ST8SIA3

Alias : SIAT8C, ST8SiaIII

Description

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3

Original Clone ID

ha06323

Features of the cloned ORF sequence

Description

Length: 1140 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 380 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32834.1 7.2e-172 100.0 ST8SIA3 CCDS81919.1 1.7e-50 39.1 ST8SIA2 CCDS10372.1 1.8e-50 39.1 ST8SIA2 CCDS4091.1 7.2e-47 39.3 ST8SIA4 CCDS31158.1 6.3e-39 35.8 ST8SIA6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001675 112 376 PF00777 Glycosyl transferase
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 9 VASVLGLVMLSVALLILSLISYV 31 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056963 380 609478 100.0 100.0 NP_001317345 354 602546 39.1 81.6 NP_006002 375 602546 39.1 81.6 XP_016878131 396 602546 39.1 81.6 NP_003025 356 601123 31.4 82.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3501 Download

>KIBB3501  1140 bp
ATGAGAAACTGCAAAATGGCCCGGGTCGCCAGTGTGCTGGGGCTGGTCATGCTCAGCGTC
GCCCTGCTGATTTTATCGCTCATCAGCTACGTGTCCCTGAAAAAGGAGAACATCTTCACC
ACTCCCAAGTACGCCAGCCCGGGGGCGCCCCGAATGTACATGTTCCACGCGGGATTCCGG
TCACAATTTGCGCTGAAGTTTCTAGACCCGTCATTCGTGCCCATTACGAATTCTCTCACC
CAGGAACTCCAAGAGAAACCTTCTAAGTGGAAATTTAATCGGACAGCGTTTTTACATCAA
AGGCAAGAAATTCTTCAGCATGTCGATGTAATAAAAAATTTTTCTTTGACCAAGAATAGT
GTTCGGATTGGACAACTGATGCACTATGATTATTCCAGCCATAAATATGTTTTCTCTATT
AGCAATAACTTCCGGTCACTTCTTCCAGATGTGTCACCCATTATGAACAAGCATTATAAT
ATTTGTGCTGTGGTTGGAAATAGTGGGATCCTGACAGGGAGCCAGTGTGGACAAGAAATA
GATAAATCAGATTTTGTTTTCCGTTGCAATTTCGCCCCTACGGAGGCTTTCCAAAGAGAT
GTTGGAAGAAAAACCAATCTTACCACCTTCAACCCCAGCATCCTGGAAAAATATTACAAC
AATCTCTTGACTATTCAGGACCGTAACAACTTTTTCCTCAGTTTAAAAAAGCTTGACGGG
GCCATTCTTTGGATCCCTGCATTTTTCTTCCACACTTCAGCAACTGTGACCAGGACATTA
GTTGACTTTTTTGTTGAACACAGAGGTCAGTTAAAAGTCCAACTGGCTTGGCCGGGAAAT
ATAATGCAACATGTCAACAGGTACTGGAAAAACAAACATTTGTCACCTAAACGGCTGAGC
ACAGGTATTCTTATGTACACCCTTGCATCAGCAATATGTGAAGAGATCCACTTGTATGGA
TTTTGGCCGTTTGGATTTGACCCCAACACAAGGGAAGATCTTCCATACCATTACTATGAC
AAAAAAGGAACCAAATTTACCACCAAGTGGCAGGAGTCCCACCAGCTGCCTGCTGAGTTT
CAGCTGCTGTACCGAATGCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACACTGTGCC

ORF Protein

Cloned ORF protein sequence for pF1KB3501 Download

>KIBB3501  380 aa
MRNCKMARVASVLGLVMLSVALLILSLISYVSLKKENIFTTPKYASPGAPRMYMFHAGFR
SQFALKFLDPSFVPITNSLTQELQEKPSKWKFNRTAFLHQRQEILQHVDVIKNFSLTKNS
VRIGQLMHYDYSSHKYVFSISNNFRSLLPDVSPIMNKHYNICAVVGNSGILTGSQCGQEI
DKSDFVFRCNFAPTEAFQRDVGRKTNLTTFNPSILEKYYNNLLTIQDRNNFFLSLKKLDG
AILWIPAFFFHTSATVTRTLVDFFVEHRGQLKVQLAWPGNIMQHVNRYWKNKHLSPKRLS
TGILMYTLASAICEEIHLYGFWPFGFDPNTREDLPYHYYDKKGTKFTTKWQESHQLPAEF
QLLYRMHGEGLTKLTLSHCA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3501 Download

>pF1KB3501  4253 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGAAACTGC
AAAATGGCCCGGGTCGCCAGTGTGCTGGGGCTGGTCATGCTCAGCGTCGCCCTGCTGATT
TTATCGCTCATCAGCTACGTGTCCCTGAAAAAGGAGAACATCTTCACCACTCCCAAGTAC
GCCAGCCCGGGGGCGCCCCGAATGTACATGTTCCACGCGGGATTCCGGTCACAATTTGCG
CTGAAGTTTCTAGACCCGTCATTCGTGCCCATTACGAATTCTCTCACCCAGGAACTCCAA
GAGAAACCTTCTAAGTGGAAATTTAATCGGACAGCGTTTTTACATCAAAGGCAAGAAATT
CTTCAGCATGTCGATGTAATAAAAAATTTTTCTTTGACCAAGAATAGTGTTCGGATTGGA
CAACTGATGCACTATGATTATTCCAGCCATAAATATGTTTTCTCTATTAGCAATAACTTC
CGGTCACTTCTTCCAGATGTGTCACCCATTATGAACAAGCATTATAATATTTGTGCTGTG
GTTGGAAATAGTGGGATCCTGACAGGGAGCCAGTGTGGACAAGAAATAGATAAATCAGAT
TTTGTTTTCCGTTGCAATTTCGCCCCTACGGAGGCTTTCCAAAGAGATGTTGGAAGAAAA
ACCAATCTTACCACCTTCAACCCCAGCATCCTGGAAAAATATTACAACAATCTCTTGACT
ATTCAGGACCGTAACAACTTTTTCCTCAGTTTAAAAAAGCTTGACGGGGCCATTCTTTGG
ATCCCTGCATTTTTCTTCCACACTTCAGCAACTGTGACCAGGACATTAGTTGACTTTTTT
GTTGAACACAGAGGTCAGTTAAAAGTCCAACTGGCTTGGCCGGGAAATATAATGCAACAT
GTCAACAGGTACTGGAAAAACAAACATTTGTCACCTAAACGGCTGAGCACAGGTATTCTT
ATGTACACCCTTGCATCAGCAATATGTGAAGAGATCCACTTGTATGGATTTTGGCCGTTT
GGATTTGACCCCAACACAAGGGAAGATCTTCCATACCATTACTATGACAAAAAAGGAACC
AAATTTACCACCAAGTGGCAGGAGTCCCACCAGCTGCCTGCTGAGTTTCAGCTGCTGTAC
CGAATGCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACACTGTGCCGTTTAAACGAAT
TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC
TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC
ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT
ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT
GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT
GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT
TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT
GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG
CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT
CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA
TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG
TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA
CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT
GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG
CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA
ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT
CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC
GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG
GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA
AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG
GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC
TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT
CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA
ACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCC
TTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTC
TTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACC
AGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTT
CAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTT
CAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGC
TGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAA
GGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGAC
CTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGG
GAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGA
GCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACT
TGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAA
CGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGC
GTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAA
TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC
TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC
GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC
CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT
GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA
CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG
CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA
CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA
TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG
CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG
GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT
AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC
TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT