RAD23A ORF clone FXC02165

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Flexi ORF Clone FXC02165

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Clone info.

Species

human

Clone Name

pF1KB5018 Sequence (with vector) Restriction Map

Product ID

FXC02165

HaloTag Clone PID

FHC02165

ORF Sequence

DNA sequence (1086 bp)
Protein sequence (362 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463210]

Gene

KIBB5018

Symbol

RAD23A

Alias : HHR23A, HR23A

Description

RAD23 homolog A, nucleotide excision repair protein, transcript variant 2

Original Clone ID

bm02142

Features of the cloned ORF sequence

Description

Length: 1086 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 362 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS59358.1 8.2e-78 100.0 RAD23A CCDS12289.1 2.2e-77 99.7 RAD23A CCDS59357.1 3.7e-56 84.6 RAD23A CCDS59138.1 2.2e-19 54.1 RAD23B CCDS6769.1 2.8e-11 58.5 RAD23B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR004806 257 279 PR01839 UV excision repair protein Rad23 IPR004806 313 329 PR01839 UV excision repair protein Rad23 IPR004806 330 344 PR01839 UV excision repair protein Rad23 IPR004806 345 360 PR01839 UV excision repair protein Rad23 HMMPfam IPR000626 8 79 PF00240 Ubiquitin IPR000449 162 198 PF00627 Ubiquitin-associated/translation elongation factor EF1B IPR015360 231 287 PF09280 XPC-binding domain IPR000449 320 354 PF00627 Ubiquitin-associated/translation elongation factor EF1B HMMSmart IPR000626 3 77 SM00213 Ubiquitin IPR015940 163 200 SM00165 Ubiquitin-associated/translation elongation factor EF1B IPR006636 229 272 SM00727 Heat shock chaperonin-binding IPR015940 319 356 SM00165 Ubiquitin-associated/translation elongation factor EF1B HMMTigr IPR004806 3 362 TIGR00601 UV excision repair protein Rad23 ProfileScan IPR019955 3 81 PS50053 Ubiquitin supergroup IPR015940 161 201 PS50030 Ubiquitin-associated/translation elongation factor EF1B IPR015940 317 357 PS50030 Ubiquitin-associated/translation elongation factor EF1B
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001257291 362 600061 100.0 100.0 NP_005044 363 600061 99.7 100.0 NP_001257292 308 600061 84.6 100.0 NP_001231653 337 600062 54.1 87.0 NP_001231642 388 600062 58.7 93.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5018 Download

>KIBB5018  1086 bp
ATGGCCGTCACCATCACGCTCAAAACGCTGCAGCAGCAGACCTTCAAGATCCGCATGGAG
CCTGACGAGACGGTGAAGGTGCTAAAGGAGAAGATAGAAGCTGAGAAGGGTCGTGATGCC
TTCCCCGTGGCTGGACAGAAACTCATCTATGCCGGCAAGATCTTGAGTGACGATGTCCCT
ATCAGGGACTATCGCATCGATGAGAAGAACTTTGTGGTCGTCATGGTGACCAAGACCAAA
GCCGGCCAGGGTACCTCAGCACCCCCAGAGGCCTCACCCACAGCTGCCCCAGAGTCCTCT
ACATCCTTCCCGCCTGCCCCCACCTCAGGCATGTCCCATCCCCCACCTGCCGCCAGAGAG
GACAAGAGCCCATCAGAGGAATCCGCCCCCACGACGTCCCCAGAGTCTGTGTCAGGCTCT
GTTCCCTCTTCAGGTAGCAGCGGGCGAGAGGAAGACGCGGCCTCCACGCTAGTGACGGGC
TCTGAGTATGAGACGATGCTGACGGAGATCATGTCCATGGGCTATGAGCGAGAGCGGGTC
GTGGCCGCCCTGAGAGCCAGCTACAACAACCCCCACCGAGCCGTGGAGTATCTGCTCACG
GGAATTCCTGGGAGCCCCGAGCCGGAACACGGTTCTGTCCAGGAGAGCCAGGTATCGGAG
CAGCCGGCCACGGAAGCAGGAGAGAACCCCCTGGAGTTCCTGCGGGACCAGCCCCAGTTC
CAGAACATGCGGCAGGTGATTCAGCAGAACCCTGCGCTGCTGCCCGCCCTGCTCCAGCAG
CTGGGCCAGGAGAACCCTCAGCTTTTACAGCAAATCAGCCGGCACCAGGAGCAGTTCATC
CAGATGCTGAACGAGCCCCCTGGGGAGCTGGCGGACATCTCAGATGTGGAGGGGGAGGTG
GGCGCCATAGGAGAGGAGGCCCCGCAGATGAACTACATCCAGGTGACGCCGCAGGAGAAA
GAAGCTATAGAGAGGTTGAAGGCCCTGGGCTTCCCAGAGAGCCTGGTCATCCAGGCCTAT
TTCGCGTGTGAAAAAAATGAGAACTTGGCTGCCAACTTCCTCCTGAGTCAGAACTTTGAT
GACGAG

ORF Protein

Cloned ORF protein sequence for pF1KB5018 Download

>KIBB5018  362 aa
MAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVP
IRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAARE
DKSPSEESAPTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERV
VAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAGENPLEFLRDQPQF
QNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEV
GAIGEEAPQMNYIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFD
DE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5018 Download

>pF1KB5018  4199 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCGTCACC
ATCACGCTCAAAACGCTGCAGCAGCAGACCTTCAAGATCCGCATGGAGCCTGACGAGACG
GTGAAGGTGCTAAAGGAGAAGATAGAAGCTGAGAAGGGTCGTGATGCCTTCCCCGTGGCT
GGACAGAAACTCATCTATGCCGGCAAGATCTTGAGTGACGATGTCCCTATCAGGGACTAT
CGCATCGATGAGAAGAACTTTGTGGTCGTCATGGTGACCAAGACCAAAGCCGGCCAGGGT
ACCTCAGCACCCCCAGAGGCCTCACCCACAGCTGCCCCAGAGTCCTCTACATCCTTCCCG
CCTGCCCCCACCTCAGGCATGTCCCATCCCCCACCTGCCGCCAGAGAGGACAAGAGCCCA
TCAGAGGAATCCGCCCCCACGACGTCCCCAGAGTCTGTGTCAGGCTCTGTTCCCTCTTCA
GGTAGCAGCGGGCGAGAGGAAGACGCGGCCTCCACGCTAGTGACGGGCTCTGAGTATGAG
ACGATGCTGACGGAGATCATGTCCATGGGCTATGAGCGAGAGCGGGTCGTGGCCGCCCTG
AGAGCCAGCTACAACAACCCCCACCGAGCCGTGGAGTATCTGCTCACGGGAATTCCTGGG
AGCCCCGAGCCGGAACACGGTTCTGTCCAGGAGAGCCAGGTATCGGAGCAGCCGGCCACG
GAAGCAGGAGAGAACCCCCTGGAGTTCCTGCGGGACCAGCCCCAGTTCCAGAACATGCGG
CAGGTGATTCAGCAGAACCCTGCGCTGCTGCCCGCCCTGCTCCAGCAGCTGGGCCAGGAG
AACCCTCAGCTTTTACAGCAAATCAGCCGGCACCAGGAGCAGTTCATCCAGATGCTGAAC
GAGCCCCCTGGGGAGCTGGCGGACATCTCAGATGTGGAGGGGGAGGTGGGCGCCATAGGA
GAGGAGGCCCCGCAGATGAACTACATCCAGGTGACGCCGCAGGAGAAAGAAGCTATAGAG
AGGTTGAAGGCCCTGGGCTTCCCAGAGAGCCTGGTCATCCAGGCCTATTTCGCGTGTGAA
AAAAATGAGAACTTGGCTGCCAACTTCCTCCTGAGTCAGAACTTTGATGACGAGGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAA
AATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGG
ATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACC
GCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAAC
TGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCA
CCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGT
GGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACC
GGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCG
AACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCC
CGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCAC
GAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCT
CTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGC
CAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTT
TCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATAC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT