OR6C3 ORF clone FXC02472

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Flexi ORF Clone FXC02472

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Clone info.

Species

human

Clone Name

pF1KB7446 Sequence (with vector) Restriction Map

Product ID

FXC02472

HaloTag Clone PID

FHC02472

ORF Sequence

DNA sequence (933 bp)
Protein sequence (311 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463979]

Gene

KIBB7446

Symbol

OR6C3

Alias : OST709

Description

olfactory receptor, family 6, subfamily C, member 3

Original Clone ID

oc00660

Features of the cloned ORF sequence

Description

Length: 933 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 311 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31819.1 4.9e-78 100.0 OR6C3 CCDS31818.1 1.9e-60 74.8 OR6C1 CCDS31820.1 3.1e-58 71.9 OR6C75 CCDS31823.1 1.8e-56 73.4 OR6C76 CCDS31816.1 1.3e-55 68.8 OR6C74 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 23 47 PR00237 GPCR IPR000725 89 100 PR00245 Olfactory receptor IPR000276 101 123 PR00237 GPCR IPR000725 126 138 PR00245 Olfactory receptor IPR000276 137 158 PR00237 GPCR IPR000725 173 189 PR00245 Olfactory receptor IPR000276 196 219 PR00237 GPCR IPR000725 233 242 PR00245 Olfactory receptor IPR000276 269 295 PR00237 GPCR IPR000725 280 291 PR00245 Olfactory receptor HMMPfam IPR000276 38 287 PF00001 GPCR ProfileScan IPR017452 38 287 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 19 DLQIVIFLFLFITYILSVTGNLT 41 SECONDARY 23 2 93 NCAAQLFFFIFMGVTEFYILTAM 115 SECONDARY 23 3 139 TLLVLCAWLSGFLTIFPPLMLLL 161 PRIMARY 23 4 199 FALVTLLFTLALVILSYMYIIRT 221 PRIMARY 23 5 237 TCSSHMIVISISYGSCIFMYAN 258 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_036492 312 603232 44.3 98.4 XP_011520809 312 603232 44.3 98.4 XP_011520808 322 603232 44.3 98.4 NP_006628 314 608496 42.7 98.1 NP_835462 317 608493 41.6 99.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7446 Download

>KIBB7446  933 bp
ATGAACCACACAATGGTCACAGAGTTTGTCCTCCTGGGCCTTTCTGATGATCCTGACCTT
CAGATTGTGATTTTTCTCTTTTTATTTATCACGTATATATTAAGTGTTACTGGAAACCTG
ACTATCATCACCCTAACCTTTGTGGACTCCCATCTGCAGACACCTATGTATTTCTTCCTC
CGGAACTTCTCTTTCTTAGAAATCTCATTTACAACCGTATGCATCCCCAGATTTCTGGGG
GCAATTATCACCAGGAATAAGACTATTTCCTATAACAACTGTGCAGCCCAACTCTTTTTC
TTTATCTTCATGGGGGTGACTGAATTTTACATTTTAACTGCCATGTCCTATGACCGCTAT
GTTGCCATCTGCAAGCCCCTTCATTACACATCCATCATGAACAGGAAACTCTGCACTCTA
CTTGTGCTGTGTGCCTGGCTAAGTGGGTTTCTGACCATTTTCCCACCCCTTATGCTTCTC
CTCCAGCTGGATTACTGTGCTTCCAACGTCATTGATCACTTTGCATGTGACTATTTTCCC
CTCTTACAACTATCTTGTTCAGATACATGGCTCCTAGAAGTAATTGGTTTTTACTTTGCT
TTGGTTACTTTGCTGTTCACTTTGGCATTAGTGATTTTATCTTACATGTACATTATCAGG
ACCATTTTGAGAATCCCGTCTGCCAGTCAAAGAAAAAAGGCTTTCTCCACTTGTTCTTCT
CACATGATTGTCATTTCCATTTCTTATGGAAGCTGTATATTCATGTATGCTAATCCATCT
GCAAAAGAAAAGGCATCATTGACAAAAGGAATAGCTATTCTCAATACATCTGTTGCCCCC
ATGCTGAACCCCTTCATTTACACTCTGAGAAACCAGCAAGTAAAACAAGCCTTCAAAAAT
GTGGTCCACAAAGTTGTGTTTTATGCAAATCAA

ORF Protein

Cloned ORF protein sequence for pF1KB7446 Download

>KIBB7446  311 aa
MNHTMVTEFVLLGLSDDPDLQIVIFLFLFITYILSVTGNLTIITLTFVDSHLQTPMYFFL
RNFSFLEISFTTVCIPRFLGAIITRNKTISYNNCAAQLFFFIFMGVTEFYILTAMSYDRY
VAICKPLHYTSIMNRKLCTLLVLCAWLSGFLTIFPPLMLLLQLDYCASNVIDHFACDYFP
LLQLSCSDTWLLEVIGFYFALVTLLFTLALVILSYMYIIRTILRIPSASQRKKAFSTCSS
HMIVISISYGSCIFMYANPSAKEKASLTKGIAILNTSVAPMLNPFIYTLRNQQVKQAFKN
VVHKVVFYANQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7446 Download

>pF1KB7446  4046 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAACCACACA
ATGGTCACAGAGTTTGTCCTCCTGGGCCTTTCTGATGATCCTGACCTTCAGATTGTGATT
TTTCTCTTTTTATTTATCACGTATATATTAAGTGTTACTGGAAACCTGACTATCATCACC
CTAACCTTTGTGGACTCCCATCTGCAGACACCTATGTATTTCTTCCTCCGGAACTTCTCT
TTCTTAGAAATCTCATTTACAACCGTATGCATCCCCAGATTTCTGGGGGCAATTATCACC
AGGAATAAGACTATTTCCTATAACAACTGTGCAGCCCAACTCTTTTTCTTTATCTTCATG
GGGGTGACTGAATTTTACATTTTAACTGCCATGTCCTATGACCGCTATGTTGCCATCTGC
AAGCCCCTTCATTACACATCCATCATGAACAGGAAACTCTGCACTCTACTTGTGCTGTGT
GCCTGGCTAAGTGGGTTTCTGACCATTTTCCCACCCCTTATGCTTCTCCTCCAGCTGGAT
TACTGTGCTTCCAACGTCATTGATCACTTTGCATGTGACTATTTTCCCCTCTTACAACTA
TCTTGTTCAGATACATGGCTCCTAGAAGTAATTGGTTTTTACTTTGCTTTGGTTACTTTG
CTGTTCACTTTGGCATTAGTGATTTTATCTTACATGTACATTATCAGGACCATTTTGAGA
ATCCCGTCTGCCAGTCAAAGAAAAAAGGCTTTCTCCACTTGTTCTTCTCACATGATTGTC
ATTTCCATTTCTTATGGAAGCTGTATATTCATGTATGCTAATCCATCTGCAAAAGAAAAG
GCATCATTGACAAAAGGAATAGCTATTCTCAATACATCTGTTGCCCCCATGCTGAACCCC
TTCATTTACACTCTGAGAAACCAGCAAGTAAAACAAGCCTTCAAAAATGTGGTCCACAAA
GTTGTGTTTTATGCAAATCAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT