SYT3 ORF clone FXC02922

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Flexi ORF Clone FXC02922

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Clone info.

Species

human

Clone Name

pF1KB8669 Sequence (with vector) Restriction Map

Product ID

FXC02922

HaloTag Clone PID

FHC02922

ORF Sequence

DNA sequence (1770 bp)
Protein sequence (590 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463256]

Gene

KIBB8669

Symbol

SYT3

Alias : SytIII

Description

synaptotagmin III, transcript variant 1

Original Clone ID

oc00332

Features of the cloned ORF sequence

Description

Length: 1770 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 590 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12798.1 2.7e-127 100.0 SYT3 CCDS871.1 1.2e-38 51.7 SYT6 CCDS8732.1 1.5e-37 46.3 SYT10 CCDS7778.1 1.5e-37 48.0 SYT9 CCDS1427.1 2.5e-26 49.7 SYT2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001565 303 318 PR00399 Synaptotagmin IPR001565 318 331 PR00399 Synaptotagmin IPR020477 331 343 PR00360 C2 region IPR020477 358 371 PR00360 C2 region IPR001565 373 388 PR00399 Synaptotagmin IPR020477 382 390 PR00360 C2 region IPR001565 393 403 PR00399 Synaptotagmin HMMPfam IPR000008 316 401 PF00168 C2 calcium-dependent membrane targeting IPR000008 448 535 PF00168 C2 calcium-dependent membrane targeting HMMSmart IPR000008 315 418 SM00239 C2 calcium-dependent membrane targeting IPR000008 447 562 SM00239 C2 calcium-dependent membrane targeting ProfileScan IPR018029 313 402 PS50004 C2 membrane targeting protein IPR018029 445 536 PS50004 C2 membrane targeting protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 54 SLLSVIVTFCGIVLLGVSLFVSW 76 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115674 590 600327 100.0 100.0 NP_001153801 590 600327 100.0 100.0 NP_001153800 590 600327 100.0 100.0 XP_011525693 590 600327 100.0 100.0 XP_011525692 590 600327 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8669 Download

>KIBB8669  1770 bp
ATGTCAGGAGACTACGAGGATGACCTCTGCCGGCGGGCACTCATCCTGGTCTCGGACCTC
TGTGCGCGGGTCCGAGATGCTGACACCAACGACAGGTGCCAGGAGTTCAATGACCGAATC
CGAGGCTATCCCCGGGGTCCAGATGCAGACATCTCCGTGAGCCTGCTGTCGGTCATCGTG
ACATTCTGTGGCATTGTCCTTCTGGGTGTCTCTCTCTTCGTGTCCTGGAAGTTGTGCTGG
GTGCCCTGGCGGGACAAGGGAGGCTCGGCAGTGGGCGGTGGCCCCCTGCGCAAAGACCTA
GGCCCTGGTGTCGGGCTGGCAGGCCTGGTAGGCGGAGGCGGGCACCACCTGGCGGCTGGC
CTGGGTGGCCATCCTCTGCTGGGCGGCCCACACCACCATGCCCATGCCGCCCACCATCCA
CCCTTTGCTGAGCTGCTGGAGCCAGGCAGCCTGGGGGGTTCTGACACCCCTGAGCCCTCC
TACTTGGACATGGACTCGTATCCAGAGGCTGCAGCAGCAGCAGTGGCCGCTGGGGTCAAA
CCGAGCCAAACATCCCCTGAGCTGCCCTCTGAGGGGGGAGCAGGCTCTGGGTTGCTCCTG
CTGCCCCCCAGTGGTGGGGGCTTGCCCAGTGCCCAGTCACATCAGCAGGTCACAAGCCTG
GCACCCACTACCAGGTACCCAGCCCTGCCCCGACCCCTCACCCAGCAGACTCTGACCTCC
CAGCCGGACCCCAGCAGTGAGGAGCGCCCACCTGCCCTGCCCTTACCCCTGCCTGGAGGC
GAGGAAAAAGCCAAACTCATTGGGCAGATTAAGCCAGAGCTGTACCAGGGGACTGGCCCT
GGTGGCCGGCGGAGCGGTGGGGGCCCAGGCTCTGGAGAGGCAGGCACAGGGGCACCCTGT
GGCCGTATCAGCTTCGCCCTGCGGTACCTCTATGGCTCGGACCAGCTGGTGGTGAGGATC
CTGCAGGCCCTGGACCTCCCTGCCAAGGACTCCAACGGCTTCTCAGACCCCTACGTCAAG
ATCTACCTGCTGCCTGACCGCAAGAAAAAGTTTCAGACCAAGGTGCACAGGAAGACCCTG
AACCCCGTCTTCAATGAGACGTTTCAATTCTCGGTGCCCCTGGCCGAGCTGGCCCAACGC
AAACTGCACTTCAGCGTCTATGACTTTGACCGCTTCTCGCGGCACGACCTCATCGGCCAG
GTGGTGCTGGACAACCTCCTGGAGCTGGCCGAGCAGCCCCCTGACCGCCCGCTCTGGAGG
GACATCGTGGAGGGCGGCTCGGAAAAAGCAGATCTTGGGGAGCTCAACTTCTCACTCTGC
TACCTCCCCACGGCCGGGCGCCTCACCGTGACCATCATCAAAGCCTCTAACCTCAAAGCG
ATGGACCTCACTGGCTTCTCAGACCCCTACGTGAAGGCCTCCCTGATCAGCGAGGGGCGG
CGTCTGAAGAAGCGGAAAACCTCCATCAAGAAGAACACGCTGAACCCCACCTATAATGAG
GCGCTGGTGTTCGACGTGGCCCCCGAGAGCGTGGAGAACGTGGGGCTCAGCATCGCCGTG
GTGGACTACGACTGCATCGGGCACAACGAGGTGATCGGCGTGTGCCGTGTGGGCCCCGAC
GCTGCCGACCCGCACGGCCGCGAGCACTGGGCAGAGATGCTGGCCAATCCCCGCAAGCCC
GTGGAGCACTGGCATCAGCTAGTGGAGGAAAAGACTGTGACCAGCTTCACAAAAGGCAGC
AAAGGACTATCAGAGAAAGAGAACTCCGAG

ORF Protein

Cloned ORF protein sequence for pF1KB8669 Download

>KIBB8669  590 aa
MSGDYEDDLCRRALILVSDLCARVRDADTNDRCQEFNDRIRGYPRGPDADISVSLLSVIV
TFCGIVLLGVSLFVSWKLCWVPWRDKGGSAVGGGPLRKDLGPGVGLAGLVGGGGHHLAAG
LGGHPLLGGPHHHAHAAHHPPFAELLEPGSLGGSDTPEPSYLDMDSYPEAAAAAVAAGVK
PSQTSPELPSEGGAGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTS
QPDPSSEERPPALPLPLPGGEEKAKLIGQIKPELYQGTGPGGRRSGGGPGSGEAGTGAPC
GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTL
NPVFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWR
DIVEGGSEKADLGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFSDPYVKASLISEGR
RLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPD
AADPHGREHWAEMLANPRKPVEHWHQLVEEKTVTSFTKGSKGLSEKENSE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8669 Download

>pF1KB8669  4883 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCAGGAGAC
TACGAGGATGACCTCTGCCGGCGGGCACTCATCCTGGTCTCGGACCTCTGTGCGCGGGTC
CGAGATGCTGACACCAACGACAGGTGCCAGGAGTTCAATGACCGAATCCGAGGCTATCCC
CGGGGTCCAGATGCAGACATCTCCGTGAGCCTGCTGTCGGTCATCGTGACATTCTGTGGC
ATTGTCCTTCTGGGTGTCTCTCTCTTCGTGTCCTGGAAGTTGTGCTGGGTGCCCTGGCGG
GACAAGGGAGGCTCGGCAGTGGGCGGTGGCCCCCTGCGCAAAGACCTAGGCCCTGGTGTC
GGGCTGGCAGGCCTGGTAGGCGGAGGCGGGCACCACCTGGCGGCTGGCCTGGGTGGCCAT
CCTCTGCTGGGCGGCCCACACCACCATGCCCATGCCGCCCACCATCCACCCTTTGCTGAG
CTGCTGGAGCCAGGCAGCCTGGGGGGTTCTGACACCCCTGAGCCCTCCTACTTGGACATG
GACTCGTATCCAGAGGCTGCAGCAGCAGCAGTGGCCGCTGGGGTCAAACCGAGCCAAACA
TCCCCTGAGCTGCCCTCTGAGGGGGGAGCAGGCTCTGGGTTGCTCCTGCTGCCCCCCAGT
GGTGGGGGCTTGCCCAGTGCCCAGTCACATCAGCAGGTCACAAGCCTGGCACCCACTACC
AGGTACCCAGCCCTGCCCCGACCCCTCACCCAGCAGACTCTGACCTCCCAGCCGGACCCC
AGCAGTGAGGAGCGCCCACCTGCCCTGCCCTTACCCCTGCCTGGAGGCGAGGAAAAAGCC
AAACTCATTGGGCAGATTAAGCCAGAGCTGTACCAGGGGACTGGCCCTGGTGGCCGGCGG
AGCGGTGGGGGCCCAGGCTCTGGAGAGGCAGGCACAGGGGCACCCTGTGGCCGTATCAGC
TTCGCCCTGCGGTACCTCTATGGCTCGGACCAGCTGGTGGTGAGGATCCTGCAGGCCCTG
GACCTCCCTGCCAAGGACTCCAACGGCTTCTCAGACCCCTACGTCAAGATCTACCTGCTG
CCTGACCGCAAGAAAAAGTTTCAGACCAAGGTGCACAGGAAGACCCTGAACCCCGTCTTC
AATGAGACGTTTCAATTCTCGGTGCCCCTGGCCGAGCTGGCCCAACGCAAACTGCACTTC
AGCGTCTATGACTTTGACCGCTTCTCGCGGCACGACCTCATCGGCCAGGTGGTGCTGGAC
AACCTCCTGGAGCTGGCCGAGCAGCCCCCTGACCGCCCGCTCTGGAGGGACATCGTGGAG
GGCGGCTCGGAAAAAGCAGATCTTGGGGAGCTCAACTTCTCACTCTGCTACCTCCCCACG
GCCGGGCGCCTCACCGTGACCATCATCAAAGCCTCTAACCTCAAAGCGATGGACCTCACT
GGCTTCTCAGACCCCTACGTGAAGGCCTCCCTGATCAGCGAGGGGCGGCGTCTGAAGAAG
CGGAAAACCTCCATCAAGAAGAACACGCTGAACCCCACCTATAATGAGGCGCTGGTGTTC
GACGTGGCCCCCGAGAGCGTGGAGAACGTGGGGCTCAGCATCGCCGTGGTGGACTACGAC
TGCATCGGGCACAACGAGGTGATCGGCGTGTGCCGTGTGGGCCCCGACGCTGCCGACCCG
CACGGCCGCGAGCACTGGGCAGAGATGCTGGCCAATCCCCGCAAGCCCGTGGAGCACTGG
CATCAGCTAGTGGAGGAAAAGACTGTGACCAGCTTCACAAAAGGCAGCAAAGGACTATCA
GAGAAAGAGAACTCCGAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGAT
CCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTC
AGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTG
CTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCT
ACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCT
TCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCT
CGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGG
GTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTC
GTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGA
GCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGG
CAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTA
TAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGG
GGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTG
CTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTAT
TACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT