NEUROD6 ORF clone FXC03207

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Flexi ORF Clone FXC03207

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Clone info.

Species

human

Clone Name

pF1KB9629 Sequence (with vector) Restriction Map

Product ID

FXC03207

HaloTag Clone PID

FHC03207

ORF Sequence

DNA sequence (1011 bp)
Protein sequence (337 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464632]

Gene

KIBB9629

Symbol

NEUROD6

Alias : Atoh2, MATH2, Math-2, NEX1M, Nex1, bHLHa2

Description

neuronal differentiation 6

Original Clone ID

cp00212

Features of the cloned ORF sequence

Description

Length: 1011 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 337 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5434.1 2e-98 100.0 NEUROD6 CCDS2283.1 3.9e-40 49.9 NEUROD1 CCDS8886.1 7.5e-32 51.3 NEUROD4 CCDS11338.1 4.8e-30 51.7 NEUROD2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001092 95 146 PF00010 Helix-loop-helix DNA-binding domain IPR022575 153 272 PF12533 Neurogenic differentiation factor HMMSmart IPR001092 100 152 SM00353 Helix-loop-helix DNA-binding domain ProfileScan IPR001092 95 147 PS50888 Helix-loop-helix DNA-binding domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_073565 337 611513 100.0 100.0 NP_002491 356 125853,601724,606394 49.9 99.7 NP_006151 382 601725 51.7 90.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9629 Download

>KIBB9629  1011 bp
ATGTTAACACTACCGTTTGATGAGTCTGTTGTAATGCCAGAATCCCAGATGTGCAGAAAG
TTTTCTAGAGAATGCGAGGACCAGAAGCAAATTAAGAAGCCAGAAAGCTTTTCCAAACAG
ATTGTCCTTCGAGGAAAGAGCATCAAAAGGGCCCCTGGAGAAGAAACCGAGAAAGAAGAA
GAGGAGGAAGACAGGGAAGAGGAAGATGAAAATGGGTTGCCTAGAAGGAGGGGTCTTAGG
AAAAAAAAGACAACAAAGCTGCGATTGGAAAGGGTCAAGTTCAGGAGACAGGAAGCGAAC
GCGCGCGAGAGGAACAGGATGCACGGCCTCAACGACGCTCTGGACAACTTAAGAAAAGTG
GTCCCCTGTTATTCTAAAACCCAGAAACTGTCCAAAATAGAGACTTTACGACTGGCCAAA
AACTACATCTGGGCACTTTCTGAAATTCTGAGAATCGGCAAGAGACCAGATCTGCTCACA
TTCGTCCAAAACTTATGCAAAGGTCTTTCCCAGCCAACTACAAACTTGGTGGCAGGCTGC
TTGCAGCTCAACGCCAGGAGTTTCCTGATGGGTCAGGGTGGGGAGGCTGCACACCACACA
AGGTCACCCTACTCTACCTTCTACCCACCCTACCACAGCCCTGAGCTCACCACTCCCCCG
GGGCATGGGACTCTTGATAATTCCAAGTCCATGAAACCCTACAATTATTGCAGTGCGTAT
GAATCCTTCTATGAAAGTACTTCCCCTGAGTGTGCCAGCCCTCAGTTTGAAGGTCCCTTA
AGTCCTCCCCCAATTAACTATAATGGGATATTTTCCCTGAAGCAAGAAGAAACCTTGGAC
TATGGTAAAAATTACAATTACGGCATGCATTACTGTGCAGTGCCACCCAGGGGTCCCCTT
GGGCAGGGTGCCATGTTCAGGTTGCCCACCGACAGCCACTTCCCTTACGACTTACATCTG
CGCAGCCAATCTCTCACAATGCAAGATGAATTAAATGCAGTTTTTCATAAT

ORF Protein

Cloned ORF protein sequence for pF1KB9629 Download

>KIBB9629  337 aa
MLTLPFDESVVMPESQMCRKFSRECEDQKQIKKPESFSKQIVLRGKSIKRAPGEETEKEE
EEEDREEEDENGLPRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKV
VPCYSKTQKLSKIETLRLAKNYIWALSEILRIGKRPDLLTFVQNLCKGLSQPTTNLVAGC
LQLNARSFLMGQGGEAAHHTRSPYSTFYPPYHSPELTTPPGHGTLDNSKSMKPYNYCSAY
ESFYESTSPECASPQFEGPLSPPPINYNGIFSLKQEETLDYGKNYNYGMHYCAVPPRGPL
GQGAMFRLPTDSHFPYDLHLRSQSLTMQDELNAVFHN

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9629 Download

>pF1KB9629  4124 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTTAACACTA
CCGTTTGATGAGTCTGTTGTAATGCCAGAATCCCAGATGTGCAGAAAGTTTTCTAGAGAA
TGCGAGGACCAGAAGCAAATTAAGAAGCCAGAAAGCTTTTCCAAACAGATTGTCCTTCGA
GGAAAGAGCATCAAAAGGGCCCCTGGAGAAGAAACCGAGAAAGAAGAAGAGGAGGAAGAC
AGGGAAGAGGAAGATGAAAATGGGTTGCCTAGAAGGAGGGGTCTTAGGAAAAAAAAGACA
ACAAAGCTGCGATTGGAAAGGGTCAAGTTCAGGAGACAGGAAGCGAACGCGCGCGAGAGG
AACAGGATGCACGGCCTCAACGACGCTCTGGACAACTTAAGAAAAGTGGTCCCCTGTTAT
TCTAAAACCCAGAAACTGTCCAAAATAGAGACTTTACGACTGGCCAAAAACTACATCTGG
GCACTTTCTGAAATTCTGAGAATCGGCAAGAGACCAGATCTGCTCACATTCGTCCAAAAC
TTATGCAAAGGTCTTTCCCAGCCAACTACAAACTTGGTGGCAGGCTGCTTGCAGCTCAAC
GCCAGGAGTTTCCTGATGGGTCAGGGTGGGGAGGCTGCACACCACACAAGGTCACCCTAC
TCTACCTTCTACCCACCCTACCACAGCCCTGAGCTCACCACTCCCCCGGGGCATGGGACT
CTTGATAATTCCAAGTCCATGAAACCCTACAATTATTGCAGTGCGTATGAATCCTTCTAT
GAAAGTACTTCCCCTGAGTGTGCCAGCCCTCAGTTTGAAGGTCCCTTAAGTCCTCCCCCA
ATTAACTATAATGGGATATTTTCCCTGAAGCAAGAAGAAACCTTGGACTATGGTAAAAAT
TACAATTACGGCATGCATTACTGTGCAGTGCCACCCAGGGGTCCCCTTGGGCAGGGTGCC
ATGTTCAGGTTGCCCACCGACAGCCACTTCCCTTACGACTTACATCTGCGCAGCCAATCT
CTCACAATGCAAGATGAATTAAATGCAGTTTTTCATAATGTTTAAACGAATTCGAGCTCG
GTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAA
AGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCT
TGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTC
GCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTAC
CTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCAT
CCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCC
CTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCC
TCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATC
TGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTT
GAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTAT
GACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAG
GGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGAC
GAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGAC
GTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTC
CTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGG
CTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAG
CGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCAT
CAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAG
GATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGC
TTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCG
TTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTG
CTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAG
TTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATC
AGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAA
CATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTT
TTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTG
GCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCG
CTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAG
CGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTC
CAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAA
CTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGG
TAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCC
TAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTAC
CTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGG
TTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTT
GATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGT
CATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAAC
GCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGA
TTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAAT
TTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCT
GCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCC
ACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTC
CGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGG
TCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCC
GAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGT
AGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTT
TTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATT
TGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCA
GGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTC
TTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT