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SpecieshumanProduct IDFXC03357Cloning SiteSgfI-PmeIGeneKIBB9847SymbolNPY4R
Alias : NPY4-R, PP1, PPYR1, Y4Descriptionneuropeptide Y receptor Y4, transcript variant 1Original Clone IDcp00416
Length: 1125 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 375 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS81459.1 3.9e-138 100.0 1 CCDS73100.1 1.7e-137 99.7 NPY4R CCDS34089.1 4.7e-58 45.7 NPY1R CCDS7606.1 8.4e-31 37.6 PRLHR CCDS3791.1 1.2e-27 32.9 NPY2R
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR001933 2 17 PR01015 Neuropeptide Y4 receptor IPR001933 19 32 PR01015 Neuropeptide Y4 receptor IPR001933 34 47 PR01015 Neuropeptide Y4 receptor IPR000276 43 67 PR00237 GPCR IPR000611 68 80 PR01012 Neuropeptide Y receptor IPR000276 76 97 PR00237 GPCR IPR000611 98 110 PR01012 Neuropeptide Y receptor IPR000276 121 143 PR00237 GPCR IPR000611 121 136 PR01012 Neuropeptide Y receptor IPR000276 155 176 PR00237 GPCR IPR001933 175 190 PR01015 Neuropeptide Y4 receptor IPR001933 190 200 PR01015 Neuropeptide Y4 receptor IPR000276 215 238 PR00237 GPCR IPR001933 248 261 PR01015 Neuropeptide Y4 receptor IPR000276 263 287 PR00237 GPCR IPR001933 290 301 PR01015 Neuropeptide Y4 receptor IPR000276 304 330 PR00237 GPCR IPR000611 309 318 PR01012 Neuropeptide Y receptor IPR000611 320 333 PR01012 Neuropeptide Y receptor IPR001933 329 340 PR01015 Neuropeptide Y4 receptor IPR001933 345 358 PR01015 Neuropeptide Y4 receptor IPR001933 359 373 PR01015 Neuropeptide Y4 receptor HMMPfam IPR000276 58 322 PF00001 GPCR ProfileScan IPR017452 58 322 PS50262 GPCR
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 41 MVFIVTSYSIETVVGVLGNLCLM 63 SECONDARY 23 2 78 LLIANLAFSDFLMCLLCQPLTAV 100 SECONDARY 23 3 117 SAFIQCMSVTVSILSLVLVALER 139 PRIMARY 23 4 155 QAYLGIVLIWVIACVLSLPFLAN 177 PRIMARY 23 5 214 YTTFLLLFQYCLPLGFILVCYAR 236 PRIMARY 23 6 263 VNVVLVVMVVAFAVLWLPLHVFN 285 PRIMARY 23 7 299 HGNLIFLVCHLLAMASTCVNPFI 321 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011538239 375 601790 99.7 100.0 NP_001265723 375 601790 99.7 100.0 XP_016871875 375 601790 99.7 100.0 XP_011538238 375 601790 99.7 100.0 XP_016871876 375 601790 99.7 100.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB9847 Download>KIBB9847 1125 bp ATGAACACCTCTCACCTCCTGGCCTTGCTGCTCCCAAAATCTCCACAAGGTGAAAACAGA AGCAAACCCCTGGGCACCCCATACAACTTCTCTGAACATTGCCAGGATTCCGTGGACGTG ATGGTCTTCATCGTCACTTCCTACAGCATTGAGACTGTCGTGGGGGTCCTGGGTAACCTC TGCCTGATGTGTGTGACTGTGAGGCAGAAGGAGAAAGCCAACGTGACCAACCTGCTTATC GCCAACCTGGCCTTCTCTGACTTCCTCATGTGCCTCCTCTGCCAGCCGCTGACCGCCGTC TACACCATCATGGACTACTGGATCTTTGGAGAGACCCTCTGCAAGATGTCGGCCTTCATC CAGTGCATGTCGGTGACGGTCTCCATCCTCTCGCTCGTCCTCGTGGCCCTGGAGAGGCAT CAGCTCATCATCAACCCAACAGGCTGGAAGCCCAGCATCTCACAGGCCTACCTGGGGATT GTGCTCATCTGGGTCATTGCCTGTGTCCTCTCCCTGCCCTTCCTGGCCAACAGCATCCTG GAGAATGTCTTCCACAAGAACCACTCCAAGGCTCTGGAGTTCCTGGCGGATAAGGTGGTC TGTACCGAGTCCTGGCCACTGGCTCACCACCGCACCATCTACACCACCTTCCTGCTCCTC TTCCAGTACTGCCTCCCACTGGGCTTCATCTTGGTCTGTTATGCACGCATCTACCGGCGC CTGCAGAGGCAGGGGCGCGTGTTTCACAAGGGCACCTACAGCTTGCGAGCTGGGCACATG AAGCAGGTCAATGTGGTGCTGGTGGTGATGGTGGTGGCCTTTGCCGTGCTCTGGCTGCCT CTGCATGTGTTCAACAGCCTGGAAGACTGGCACCATGAGGCCATCCCCATCTGCCACGGG AACCTCATCTTCTTAGTGTGCCACTTGCTTGCCATGGCCTCCACCTGCGTCAACCCATTC ATCTATGGCTTTCTCAACACCAACTTCAAGAAGGAGATCAAGGCCCTGGTGCTGACTTGC CAGCAGAGCGCCCCCCTGGAGGAGTCGGAGCATCTGCCCCTGTCCACAGTACATACGGAA GTCTCCAAAGGGTCCCTGAGGCTAAGTGGCAGGTCCAATCCCATT
Cloned ORF protein sequence for pF1KB9847 Download>KIBB9847 375 aa MNTSHLLALLLPKSPQGENRSKPLGTPYNFSEHCQDSVDVMVFIVTSYSIETVVGVLGNL CLMCVTVRQKEKANVTNLLIANLAFSDFLMCLLCQPLTAVYTIMDYWIFGETLCKMSAFI QCMSVTVSILSLVLVALERHQLIINPTGWKPSISQAYLGIVLIWVIACVLSLPFLANSIL ENVFHKNHSKALEFLADKVVCTESWPLAHHRTIYTTFLLLFQYCLPLGFILVCYARIYRR LQRQGRVFHKGTYSLRAGHMKQVNVVLVVMVVAFAVLWLPLHVFNSLEDWHHEAIPICHG NLIFLVCHLLAMASTCVNPFIYGFLNTNFKKEIKALVLTCQQSAPLEESEHLPLSTVHTE VSKGSLRLSGRSNPI
Nucleotide Sequence (with vector) for pF1KB9847 Download>pF1KB9847 4238 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAACACCTCT CACCTCCTGGCCTTGCTGCTCCCAAAATCTCCACAAGGTGAAAACAGAAGCAAACCCCTG GGCACCCCATACAACTTCTCTGAACATTGCCAGGATTCCGTGGACGTGATGGTCTTCATC GTCACTTCCTACAGCATTGAGACTGTCGTGGGGGTCCTGGGTAACCTCTGCCTGATGTGT GTGACTGTGAGGCAGAAGGAGAAAGCCAACGTGACCAACCTGCTTATCGCCAACCTGGCC TTCTCTGACTTCCTCATGTGCCTCCTCTGCCAGCCGCTGACCGCCGTCTACACCATCATG GACTACTGGATCTTTGGAGAGACCCTCTGCAAGATGTCGGCCTTCATCCAGTGCATGTCG GTGACGGTCTCCATCCTCTCGCTCGTCCTCGTGGCCCTGGAGAGGCATCAGCTCATCATC AACCCAACAGGCTGGAAGCCCAGCATCTCACAGGCCTACCTGGGGATTGTGCTCATCTGG GTCATTGCCTGTGTCCTCTCCCTGCCCTTCCTGGCCAACAGCATCCTGGAGAATGTCTTC CACAAGAACCACTCCAAGGCTCTGGAGTTCCTGGCGGATAAGGTGGTCTGTACCGAGTCC TGGCCACTGGCTCACCACCGCACCATCTACACCACCTTCCTGCTCCTCTTCCAGTACTGC CTCCCACTGGGCTTCATCTTGGTCTGTTATGCACGCATCTACCGGCGCCTGCAGAGGCAG GGGCGCGTGTTTCACAAGGGCACCTACAGCTTGCGAGCTGGGCACATGAAGCAGGTCAAT GTGGTGCTGGTGGTGATGGTGGTGGCCTTTGCCGTGCTCTGGCTGCCTCTGCATGTGTTC AACAGCCTGGAAGACTGGCACCATGAGGCCATCCCCATCTGCCACGGGAACCTCATCTTC TTAGTGTGCCACTTGCTTGCCATGGCCTCCACCTGCGTCAACCCATTCATCTATGGCTTT CTCAACACCAACTTCAAGAAGGAGATCAAGGCCCTGGTGCTGACTTGCCAGCAGAGCGCC CCCCTGGAGGAGTCGGAGCATCTGCCCCTGTCCACAGTACATACGGAAGTCTCCAAAGGG TCCCTGAGGCTAAGTGGCAGGTCCAATCCCATTGTTTAAACGAATTCGAGCTCGGTACCC GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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