GJA9 ORF clone FXC03376

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Flexi ORF Clone FXC03376

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Clone info.

Species

human

Clone Name

pF1KB9874 Sequence (with vector) Restriction Map

Product ID

FXC03376

HaloTag Clone PID

FHC03376

ORF Sequence

DNA sequence (1545 bp)
Protein sequence (515 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464552]

Gene

KIBB9874

Symbol

GJA9

Alias : CX58, CX59, GJA10

Description

gap junction protein, alpha 9, 59kDa

Original Clone ID

cp00443

Features of the cloned ORF sequence

Description

Length: 1545 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 515 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS432.1 6.4e-207 100.0 GJA9 CCDS5025.1 1.9e-67 47.7 GJA10 CCDS9289.1 1.7e-51 54.5 GJA3 CCDS30834.1 3e-51 39.8 GJA8 CCDS929.1 3.8e-49 45.9 GJA5 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000500 21 45 PR00206 Connexin IPR000500 52 74 PR00206 Connexin IPR000500 77 97 PR00206 Connexin IPR000500 153 179 PR00206 Connexin IPR000500 189 209 PR00206 Connexin IPR000500 210 233 PR00206 Connexin HMMPfam IPR013092 3 107 PF00029 Connexin IPR019570 167 233 PF10582 Gap junction protein HMMSmart IPR013092 43 76 SM00037 Connexin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 22 GKIWLTILFIFRMLVLGVAAEDV 44 PRIMARY 23 2 74 LIRYWVLQVIFVSSPSLVYMGHA 96 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_110399 515 611923 100.0 100.0 NP_115991 543 611924 47.7 88.0 XP_011507719 427 116200,600897,612474 39.8 80.2 NP_005258 433 116200,600897,612474 39.8 80.2 XP_011507718 433 116200,600897,612474 39.8 80.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9874 Download

>KIBB9874  1545 bp
ATGGGGGACTGGAATCTCCTTGGAGATACTCTGGAGGAAGTTCACATCCACTCCACCATG
ATTGGAAAGATCTGGCTCACCATCCTGTTCATATTTCGAATGCTTGTTCTGGGTGTAGCA
GCTGAAGATGTCTGGAATGATGAGCAGTCTGGCTTCATCTGCAATACAGAACAACCAGGC
TGCAGAAATGTATGCTACGACCAGGCCTTTCCTATCTCCCTCATTAGATACTGGGTTCTG
CAGGTGATATTTGTGTCTTCACCATCCCTGGTCTACATGGGCCATGCATTGTACCGACTG
AGAGTTCTTGAGGAAGAGAGGCAAAGGATGAAAGCTCAGTTAAGAGTAGAACTGGAGGAG
GTAGAGTTTGAAATGCCTAGGGATCGGAGGAGATTGGAGCAAGAGCTTTGTCAGCTGGAG
AAAAGGAAACTAAATAAAGCTCCACTCAGAGGAACCTTGCTTTGCACTTATGTGATACAC
ATTTTCACTCGCTCTGTGGTTGAAGTTGGATTCATGATTGGACAGTACCTTTTATATGGA
TTTCACTTAGAGCCGCTATTTAAGTGCCATGGCCACCCGTGTCCAAATATAATCGACTGT
TTTGTCTCAAGACCAACAGAAAAGACAATATTCCTATTATTTATGCAATCTATAGCCACT
ATTTCACTTTTCTTAAACATTCTTGAAATTTTCCACCTAGGTTTTAAAAAGATTAAAAGA
GGGCTTTGGGGAAAATACAAGTTGAAGAAGGAACATAATGAATTCCATGCAAACAAGGCA
AAACAAAATGTAGCCAAATACCAGAGCACATCTGCAAATTCACTGAAGCGACTCCCTTCT
GCCCCTGATTATAATCTGTTAGTGGAAAAGCAAACACACACTGCAGTGTACCCTAGTTTA
AATTCATCTTCTGTATTCCAGCCAAATCCTGACAATCATAGTGTAAATGATGAGAAATGC
ATTTTGGATGAACAGGAAACTGTACTTTCTAATGAGATTTCCACACTTAGTACTAGTTGT
AGTCATTTTCAACACATCAGTTCAAACAATAACAAAGACACTCATAAAATATTTGGAAAA
GAACTTAATGGTAACCAGTTAATGGAAAAAAGAGAAACTGAAGGCAAAGACAGCAAAAGG
AACTACTACTCTAGAGGTCACCGCTCTATTCCAGGTGTTGCTATAGATGGAGAGAACAAC
ATGAGGCAGTCACCCCAAACAGTTTTCTCCTTGCCAGCTAACTGCGATTGGAAACCGCGG
TGGCTTAGAGCTACATGGGGTTCCTCTACAGAACATGAAAACCGGGGGTCACCTCCTAAA
GGTAACCTCAAGGGCCAGTTCAGAAAGGGCACAGTCAGAACCCTTCCTCCTTCACAAGGA
GATTCTCAATCACTTGACATTCCAAACACTGCTGATTCTTTGGGAGGGCTGTCCTTTGAG
CCAGGGTTGGTCAGAACCTGTAATAATCCTGTTTGTCCTCCAAATCACGTAGTGTCCCTA
ACGAACAATCTCATTGGTAGGCGGGTTCCCACAGATCTTCAGATC

ORF Protein

Cloned ORF protein sequence for pF1KB9874 Download

>KIBB9874  515 aa
MGDWNLLGDTLEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPG
CRNVCYDQAFPISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLEEERQRMKAQLRVELEE
VEFEMPRDRRRLEQELCQLEKRKLNKAPLRGTLLCTYVIHIFTRSVVEVGFMIGQYLLYG
FHLEPLFKCHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHLGFKKIKR
GLWGKYKLKKEHNEFHANKAKQNVAKYQSTSANSLKRLPSAPDYNLLVEKQTHTAVYPSL
NSSSVFQPNPDNHSVNDEKCILDEQETVLSNEISTLSTSCSHFQHISSNNNKDTHKIFGK
ELNGNQLMEKRETEGKDSKRNYYSRGHRSIPGVAIDGENNMRQSPQTVFSLPANCDWKPR
WLRATWGSSTEHENRGSPPKGNLKGQFRKGTVRTLPPSQGDSQSLDIPNTADSLGGLSFE
PGLVRTCNNPVCPPNHVVSLTNNLIGRRVPTDLQI

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9874 Download

>pF1KB9874  4658 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGGGACTGG
AATCTCCTTGGAGATACTCTGGAGGAAGTTCACATCCACTCCACCATGATTGGAAAGATC
TGGCTCACCATCCTGTTCATATTTCGAATGCTTGTTCTGGGTGTAGCAGCTGAAGATGTC
TGGAATGATGAGCAGTCTGGCTTCATCTGCAATACAGAACAACCAGGCTGCAGAAATGTA
TGCTACGACCAGGCCTTTCCTATCTCCCTCATTAGATACTGGGTTCTGCAGGTGATATTT
GTGTCTTCACCATCCCTGGTCTACATGGGCCATGCATTGTACCGACTGAGAGTTCTTGAG
GAAGAGAGGCAAAGGATGAAAGCTCAGTTAAGAGTAGAACTGGAGGAGGTAGAGTTTGAA
ATGCCTAGGGATCGGAGGAGATTGGAGCAAGAGCTTTGTCAGCTGGAGAAAAGGAAACTA
AATAAAGCTCCACTCAGAGGAACCTTGCTTTGCACTTATGTGATACACATTTTCACTCGC
TCTGTGGTTGAAGTTGGATTCATGATTGGACAGTACCTTTTATATGGATTTCACTTAGAG
CCGCTATTTAAGTGCCATGGCCACCCGTGTCCAAATATAATCGACTGTTTTGTCTCAAGA
CCAACAGAAAAGACAATATTCCTATTATTTATGCAATCTATAGCCACTATTTCACTTTTC
TTAAACATTCTTGAAATTTTCCACCTAGGTTTTAAAAAGATTAAAAGAGGGCTTTGGGGA
AAATACAAGTTGAAGAAGGAACATAATGAATTCCATGCAAACAAGGCAAAACAAAATGTA
GCCAAATACCAGAGCACATCTGCAAATTCACTGAAGCGACTCCCTTCTGCCCCTGATTAT
AATCTGTTAGTGGAAAAGCAAACACACACTGCAGTGTACCCTAGTTTAAATTCATCTTCT
GTATTCCAGCCAAATCCTGACAATCATAGTGTAAATGATGAGAAATGCATTTTGGATGAA
CAGGAAACTGTACTTTCTAATGAGATTTCCACACTTAGTACTAGTTGTAGTCATTTTCAA
CACATCAGTTCAAACAATAACAAAGACACTCATAAAATATTTGGAAAAGAACTTAATGGT
AACCAGTTAATGGAAAAAAGAGAAACTGAAGGCAAAGACAGCAAAAGGAACTACTACTCT
AGAGGTCACCGCTCTATTCCAGGTGTTGCTATAGATGGAGAGAACAACATGAGGCAGTCA
CCCCAAACAGTTTTCTCCTTGCCAGCTAACTGCGATTGGAAACCGCGGTGGCTTAGAGCT
ACATGGGGTTCCTCTACAGAACATGAAAACCGGGGGTCACCTCCTAAAGGTAACCTCAAG
GGCCAGTTCAGAAAGGGCACAGTCAGAACCCTTCCTCCTTCACAAGGAGATTCTCAATCA
CTTGACATTCCAAACACTGCTGATTCTTTGGGAGGGCTGTCCTTTGAGCCAGGGTTGGTC
AGAACCTGTAATAATCCTGTTTGTCCTCCAAATCACGTAGTGTCCCTAACGAACAATCTC
ATTGGTAGGCGGGTTCCCACAGATCTTCAGATCGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT