OR2A13P ORF clone FXC03536

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Flexi ORF Clone FXC03536

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Clone info.

Species

human

Clone Name

pF1KE0824 Sequence (with vector) Restriction Map

Product ID

FXC03536

HaloTag Clone PID

FHC03536

ORF Sequence

DNA sequence (804 bp)
Protein sequence (268 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529229]

Gene

KIEE0824

Symbol

OR2A13P

Description

olfactory receptor, family 2, subfamily A, member 13 pseudogene

Original Clone ID

cp01224

Features of the cloned ORF sequence

Description

Length: 804 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 268 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43671.1 3.1e-70 90.3 OR2A2 CCDS43668.1 7.1e-57 73.4 OR2A5 CCDS43672.1 2.3e-56 72.0 OR2A14 CCDS43670.1 2.7e-54 69.8 OR2A12 CCDS43673.1 3.6e-52 67.3 OR2A1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 16 37 PR00237 GPCR IPR000725 49 60 PR00245 Olfactory receptor IPR000276 61 83 PR00237 GPCR IPR000725 86 98 PR00245 Olfactory receptor IPR000725 133 149 PR00245 Olfactory receptor IPR000276 156 179 PR00237 GPCR IPR000725 193 202 PR00245 Olfactory receptor IPR000276 229 255 PR00237 GPCR IPR000725 240 251 PR00245 Olfactory receptor HMMPfam IPR000276 3 247 PF00001 GPCR ProfileScan IPR017452 1 247 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 6 ICLDHILPTPMYFFLSHLAIIDM 28 PRIMARY 23 2 98 CTILALTSWSCGFALSLVHAILL 120 PRIMARY 23 3 158 ATCVFVLVGPLCLMLVSYMHILW 180 PRIMARY 23 4 199 SSHLCVVGLFFGIAMVVYIVPDS 221 PRIMARY 23 5 234 FHSVLNPILNPLIYSLRNAQVKG 256 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011514321 317 608497 45.8 98.5 XP_011514322 317 608497 45.8 98.5 NP_036501 317 608497 45.8 98.5 NP_001005216 311 615016,615082 46.6 97.4 NP_009091 312 600578 44.8 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0824 Download

>KIEE0824  804 bp
ATGATCTTGGGACTCATCTGTCTGGACCACATTCTGCCTACCCCCATGTACTTCTTCCTC
TCACACCTGGCCATCATTGACATGTCCTATGCTTCCAACAATGTTCCCAAGATGTTGGCA
AATCTGATGAACAAGAAAAGAACCATCTCCTTTCTTCCATGCATAATGCAGACCTATTTG
CATTTCTCTTTTGCTGCTACAGAGTGTCTGATTTTGGTGGTGATGTCCTATGATAGGTAT
GTGGCCATTTGCCACCCTCTCCAGTACACTGTCATCATGAGCTGGAGAGTGTGCACGATC
CTGGCTCTCACATCCTGGTCATGTGGGTTTGCCCTGTCCCTGGTACATGCAATTCTTCTT
CTAAGGTTGCCGTTCTGTGGGCCCCGGGATGTGAACCACCTCTTCTGTGAAATTCTGTCT
GTCCTCAAGCTGGCCTGTTCTGACACCTGGGTTAACCAAGTGGTCATATTTGCTACCTGT
GTGTTTGTCTTAGTTGGACCTCTTTGTTTGATGCTTGTCTCCTACATGCACATCCTCTGG
GCCATCCTAAAGATCCAGACAAAGGAAGGCCGCATAAAGGCCTTCTCGACCTGCTCCTCC
CACCTGTGTGTGGTTGGACTCTTCTTTGGCATAGCCATGGTGGTTTACATAGTCCCAGAC
TCTAATCAACGAGAGGAGCAGGAGAAAATGCTGTCCCTGTTTCACAGTGTCTTGAACCCA
ATTCTGAACCCCCTGATCTACAGTCTGAGGAATGCTCAGGTGAAGGGCGCCCTCCACAGA
GCACTGCAGAGGACGCTGTCTATG

ORF Protein

Cloned ORF protein sequence for pF1KE0824 Download

>KIEE0824  268 aa
MILGLICLDHILPTPMYFFLSHLAIIDMSYASNNVPKMLANLMNKKRTISFLPCIMQTYL
HFSFAATECLILVVMSYDRYVAICHPLQYTVIMSWRVCTILALTSWSCGFALSLVHAILL
LRLPFCGPRDVNHLFCEILSVLKLACSDTWVNQVVIFATCVFVLVGPLCLMLVSYMHILW
AILKIQTKEGRIKAFSTCSSHLCVVGLFFGIAMVVYIVPDSNQREEQEKMLSLFHSVLNP
ILNPLIYSLRNAQVKGALHRALQRTLSM

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0824 Download

>pF1KE0824  3917 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATCTTGGGA
CTCATCTGTCTGGACCACATTCTGCCTACCCCCATGTACTTCTTCCTCTCACACCTGGCC
ATCATTGACATGTCCTATGCTTCCAACAATGTTCCCAAGATGTTGGCAAATCTGATGAAC
AAGAAAAGAACCATCTCCTTTCTTCCATGCATAATGCAGACCTATTTGCATTTCTCTTTT
GCTGCTACAGAGTGTCTGATTTTGGTGGTGATGTCCTATGATAGGTATGTGGCCATTTGC
CACCCTCTCCAGTACACTGTCATCATGAGCTGGAGAGTGTGCACGATCCTGGCTCTCACA
TCCTGGTCATGTGGGTTTGCCCTGTCCCTGGTACATGCAATTCTTCTTCTAAGGTTGCCG
TTCTGTGGGCCCCGGGATGTGAACCACCTCTTCTGTGAAATTCTGTCTGTCCTCAAGCTG
GCCTGTTCTGACACCTGGGTTAACCAAGTGGTCATATTTGCTACCTGTGTGTTTGTCTTA
GTTGGACCTCTTTGTTTGATGCTTGTCTCCTACATGCACATCCTCTGGGCCATCCTAAAG
ATCCAGACAAAGGAAGGCCGCATAAAGGCCTTCTCGACCTGCTCCTCCCACCTGTGTGTG
GTTGGACTCTTCTTTGGCATAGCCATGGTGGTTTACATAGTCCCAGACTCTAATCAACGA
GAGGAGCAGGAGAAAATGCTGTCCCTGTTTCACAGTGTCTTGAACCCAATTCTGAACCCC
CTGATCTACAGTCTGAGGAATGCTCAGGTGAAGGGCGCCCTCCACAGAGCACTGCAGAGG
ACGCTGTCTATGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT