SYT9 ORF clone FXC03774

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC03774

How to Order Order Information

Clone info.

Species

human

Clone Name

pF1KB5864 Sequence (with vector) Restriction Map

Product ID

FXC03774

HaloTag Clone PID

FHC03774

ORF Sequence

DNA sequence (1473 bp)
Protein sequence (491 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527847]

Gene

KIBB5864

Symbol

SYT9

Description

synaptotagmin IX

Original Clone ID

cs00564

Features of the cloned ORF sequence

Description

Length: 1473 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 491 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7778.1 1.3e-183 100.0 SYT9 CCDS8732.1 3e-97 59.2 SYT10 CCDS871.1 2.4e-94 62.2 SYT6 CCDS12798.1 3.9e-67 48.3 SYT3 CCDS76582.1 1.5e-47 51.7 SYT1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001565 224 239 PR00399 Synaptotagmin IPR001565 239 252 PR00399 Synaptotagmin IPR020477 252 264 PR00360 C2 region IPR020477 279 292 PR00360 C2 region IPR001565 294 309 PR00399 Synaptotagmin IPR020477 303 311 PR00360 C2 region IPR001565 314 324 PR00399 Synaptotagmin HMMPfam IPR000008 237 322 PF00168 C2 calcium-dependent membrane targeting IPR000008 369 456 PF00168 C2 calcium-dependent membrane targeting HMMSmart IPR000008 236 339 SM00239 C2 calcium-dependent membrane targeting IPR000008 368 482 SM00239 C2 calcium-dependent membrane targeting ProfileScan IPR018029 236 323 PS50004 C2 membrane targeting protein IPR018029 366 457 PS50004 C2 membrane targeting protein
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 54 LLTLVVTACGLALFGVSLFVSWK 76 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_783860 491 613528 100.0 100.0 XP_011518206 492 613528 100.0 99.6 XP_011518203 564 613528 100.0 99.6 XP_011518202 567 613528 100.0 99.6 XP_011518204 535 613528 100.0 89.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5864 Download

>KIBB5864  1473 bp
ATGCCCGGGGCCAGGGACGCGCTCTGTCACCAGGCGCTGCAGCTGCTGGCCGAGCTCTGT
GCCCGTGGGGCCCTGGAGCACGACAGCTGCCAGGATTTCATTTACCACCTGCGGGACCGT
GCCAGACCCCGGCTCCGCGACCCAGATATCTCAGTGAGCCTGCTGACCCTTGTGGTCACT
GCCTGTGGTCTCGCTCTCTTTGGCGTGTCTCTCTTCGTATCTTGGAAACTCTGCTGGGTT
CCGTGGCGAGAACGAGGCCTGCCCTCTGGTAGCAAAGACAACAACCAGGAGCCCCTTAAC
TACATGGACACAGAGACCAATGAGCAGGAGAACAGTGAGGACTTCCTAGACCCTCCCACG
CCCTGCCCTGACTCCTCCATGAAGATCAGCCACACCTCCCCTGACATTCCCCTCTCCACC
CAGACGGGGATCCAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAG
CCAACCTCGTCGGCCCGGCATAATTCAATCCGAAGACAACTCAACTTGTCAAACCCGGAC
TTCAATATCCAGCAGCTTCAAAAACAGGAACAGTTGACTGGAATTGGTAGAATTAAACCA
GAGTTATATAAGCAGAGGTCATTGGATAATGATGACGGGAGACGGAGTAACAGCAAGGCT
TGTGGGAAACTGAACTTCATTTTAAAATATGACTGTGACTTAGAGCAGCTCATAGTGAAG
ATTCACAAAGCTGTCAATTTGCCCGCCAAGGACTTTTCTGGGACTTCAGATCCTTATGTC
AAGATCTATTTGCTTCCTGATCGGAAAACAAAACACCAGACTAAAGTTCACAGAAAGACC
CTGAACCCTGTGTTTGATGAAGTGTTTTTATTTCCGGTTCCCTACAATGACCTTGAAGCA
CGGAAGCTTCACTTCTCTGTGTACGACTTTGACAGGTTCTCTCGTCATGACTTAATCGGC
CAAGTGGTGGTGGATCACTTCCTAGACTTGGCTGATTTCCCCAGGGAGTGCATCCTTTGG
AAGGATATCGAATATGTCACCAATGACAACGTGGATCTGGGAGAGCTGATGTTTTCCCTG
TGCTATCTTCCAACGGCTGGCAGGCTGACCATTACCATTATAAAAGCAAGGAATTTAAAG
GCAATGGACATAACAGGAGCATCAGATCCCTATGTGAAAGTCTCGCTGATGTGTGATGGC
AGACGACTGAAGAAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTGTTTACAAC
GAAGCCATAGTCTTTGATGTCCCTCCCGAGAACATTGACCAAATCCACTTGTCCATAGCA
GTCATGGACTATGACCGTGTAGGTCACAATGAGATCATCGGCGTGTGTCAAGTAGGCAAC
GAGGCTGAGAGGCTGGGCAGAGACCACTGGAGTGAAATGTTGTCATATCCTCGGAAGCCC
ATTGCACACTGGCATTCCCTGGTGGAGAAACGA

ORF Protein

Cloned ORF protein sequence for pF1KB5864 Download

>KIBB5864  491 aa
MPGARDALCHQALQLLAELCARGALEHDSCQDFIYHLRDRARPRLRDPDISVSLLTLVVT
ACGLALFGVSLFVSWKLCWVPWRERGLPSGSKDNNQEPLNYMDTETNEQENSEDFLDPPT
PCPDSSMKISHTSPDIPLSTQTGIQENCAHGVRVQRQVTEPTSSARHNSIRRQLNLSNPD
FNIQQLQKQEQLTGIGRIKPELYKQRSLDNDDGRRSNSKACGKLNFILKYDCDLEQLIVK
IHKAVNLPAKDFSGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLFPVPYNDLEA
RKLHFSVYDFDRFSRHDLIGQVVVDHFLDLADFPRECILWKDIEYVTNDNVDLGELMFSL
CYLPTAGRLTITIIKARNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYN
EAIVFDVPPENIDQIHLSIAVMDYDRVGHNEIIGVCQVGNEAERLGRDHWSEMLSYPRKP
IAHWHSLVEKR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5864 Download

>pF1KB5864  4586 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCCGGGGCC
AGGGACGCGCTCTGTCACCAGGCGCTGCAGCTGCTGGCCGAGCTCTGTGCCCGTGGGGCC
CTGGAGCACGACAGCTGCCAGGATTTCATTTACCACCTGCGGGACCGTGCCAGACCCCGG
CTCCGCGACCCAGATATCTCAGTGAGCCTGCTGACCCTTGTGGTCACTGCCTGTGGTCTC
GCTCTCTTTGGCGTGTCTCTCTTCGTATCTTGGAAACTCTGCTGGGTTCCGTGGCGAGAA
CGAGGCCTGCCCTCTGGTAGCAAAGACAACAACCAGGAGCCCCTTAACTACATGGACACA
GAGACCAATGAGCAGGAGAACAGTGAGGACTTCCTAGACCCTCCCACGCCCTGCCCTGAC
TCCTCCATGAAGATCAGCCACACCTCCCCTGACATTCCCCTCTCCACCCAGACGGGGATC
CAGGAGAACTGTGCCCATGGCGTCCGCGTGCAGCGCCAAGTCACAGAGCCAACCTCGTCG
GCCCGGCATAATTCAATCCGAAGACAACTCAACTTGTCAAACCCGGACTTCAATATCCAG
CAGCTTCAAAAACAGGAACAGTTGACTGGAATTGGTAGAATTAAACCAGAGTTATATAAG
CAGAGGTCATTGGATAATGATGACGGGAGACGGAGTAACAGCAAGGCTTGTGGGAAACTG
AACTTCATTTTAAAATATGACTGTGACTTAGAGCAGCTCATAGTGAAGATTCACAAAGCT
GTCAATTTGCCCGCCAAGGACTTTTCTGGGACTTCAGATCCTTATGTCAAGATCTATTTG
CTTCCTGATCGGAAAACAAAACACCAGACTAAAGTTCACAGAAAGACCCTGAACCCTGTG
TTTGATGAAGTGTTTTTATTTCCGGTTCCCTACAATGACCTTGAAGCACGGAAGCTTCAC
TTCTCTGTGTACGACTTTGACAGGTTCTCTCGTCATGACTTAATCGGCCAAGTGGTGGTG
GATCACTTCCTAGACTTGGCTGATTTCCCCAGGGAGTGCATCCTTTGGAAGGATATCGAA
TATGTCACCAATGACAACGTGGATCTGGGAGAGCTGATGTTTTCCCTGTGCTATCTTCCA
ACGGCTGGCAGGCTGACCATTACCATTATAAAAGCAAGGAATTTAAAGGCAATGGACATA
ACAGGAGCATCAGATCCCTATGTGAAAGTCTCGCTGATGTGTGATGGCAGACGACTGAAG
AAGAGGAAAACATCCACCAAGAGGAACACCTTGAATCCTGTTTACAACGAAGCCATAGTC
TTTGATGTCCCTCCCGAGAACATTGACCAAATCCACTTGTCCATAGCAGTCATGGACTAT
GACCGTGTAGGTCACAATGAGATCATCGGCGTGTGTCAAGTAGGCAACGAGGCTGAGAGG
CTGGGCAGAGACCACTGGAGTGAAATGTTGTCATATCCTCGGAAGCCCATTGCACACTGG
CATTCCCTGGTGGAGAAACGAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT