GTF2IRD2 ORF clone FXC03809

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Flexi ORF Clone FXC03809

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Clone info.

Species

human

Clone Name

pF1KB0458 Sequence (with vector) Restriction Map

Product ID

FXC03809

HaloTag Clone PID

FHC03809

ORF Sequence

DNA sequence (2847 bp)
Protein sequence (949 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527882]

Gene

KIBB0458

Symbol

GTF2IRD2

Alias : FP630, GTF2IRD2 alpha, GTF2IRD2A

Description

GTF2I repeat domain containing 2, transcript variant 1

Original Clone ID

cs01958

Features of the cloned ORF sequence

Description

Length: 2847 bp
Restriction map A Restriction map B

Features of the protein sequence

Description

Length: 949 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5576.1 0 99.7 GTF2IRD2 CCDS34659.1 0 99.4 GTF2IRD2B CCDS5574.1 9.6e-92 45.5 GTF2I CCDS5575.1 1.3e-84 43.4 GTF2I CCDS47614.1 3e-78 43.8 GTF2I The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004212 107 182 PF02946 GTF2I-like repeat IPR004212 332 407 PF02946 GTF2I-like repeat ProfileScan IPR004212 98 192 PS51139 GTF2I-like repeat IPR004212 323 417 PS51139 GTF2I-like repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_775808 949 608899 99.9 100.0 NP_001003795 949 608900 99.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0458 Download

>KIBB0458  2847 bp
ATGGCCCAGGTAGCAGTGTCCACCCTGCCTGTTGAAGAAGAGTCCTCCTCAGAGACCAGG
ATGGTGGTGACATTCCTCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGGCCAAGTCC
AAGGCAGAAGTGGCCTGCATCGCAGTGTACGAAACAGACGTGTTTGTCGTCGGAACCGAG
AGAGGATGCGCTTTTGTTAATGCCAGGACGGATTTTCAGAAAGATTTTGCAAAATACTGC
GTTGCAGAGGGACTGTGTGAGGTGAAACCTCCCTGCCCTGTGAACGGGATGCAGGTCCAC
TCGGGCGAAACGGAAATACTCAGGAAGGCAGTGGAGGACTATTTCTGCTTTTGTTATGGT
AAAGCCTTAGGGACAACAGTGATGGTGCCTGTTCCCTATGAGAAGATGCTGCGAGACCAG
TCGGCTGTGGTAGTGCAGGGGCTTCCGGAAGGCGTTGCCTTTCAACACCCTGAGAATTAC
GACCTTGCAACCCTGAAATGGATTTTGGAGAACAAAGCAGGGATTTCATTCATCATAAAT
AGACCCTTCCTAGGACCAGAGAGTCAGCTGGGTGGCCCTGGGATGGTAACAGATGCGGAG
AGATCCATAGTATCACCAAGTGAAAGCTGCGGCCCCATCAATGTGAAAACTGAACCCATG
GAAGATTCTGGCATTTCACTGAAAGCAGAAGCTGTCTCAGTCAAGAAAGAATCAGAAGAT
CCTAATTACTATCAATATAATATGCAAGGAAGCCACCCTTCTTCCACAAGCAATGAAGTA
ATAGAAATGGAATTACCAATGGAAGATTCCACTCCGCTGGTCCCTTCAGAAGAACCAAAT
GAGGACCCTGAAGCCGAGGTGAAAATCGAAGGAAACACAAATTCATCCAGTGTTACAAAT
TCTGCAGCAGGTGTTGAAGATCTTAACATCGTTCAAGTGACTGTTCCAGATAATGAGAAG
GAAAGATTATCAAGCATTGAAAAGATTAAACAGCTAAGAGAACAAGTTAATGACCTCTTT
AGCCGAAAATTTGGTGAAGCAATTGGCGTGGATTTCCCTGTGAAAGTTCCCTACAGGAAG
ATCACATTCAACCCTGGCTGTGTGGTGATTGATGGCATGCCCCCGGGGGTGGTATTCAAG
GCCCCCGGCTATCTGGAAATCAGTTCCATGAGGAGGATCTTGGAGGCAGCTGAGTTTATC
AAATTCACAGTCATCAGGCCGCTTCCAGGGCTTGAGCTCAGTAATGTGGGAAAACGCAAG
ATAGACCAGGAGGGCCGTGTGTTTCAAGAAAAGTGGGAGAGAGCGTATTTCTTCGTGGAA
GTACAGAATATTCCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATAT
AACCTAAGACGCCACTATCAAACCAATCACAGCAAGCATTATGACCAGTATATGGAAAGA
ATGCGTGACGAGAAGCTTCACGAGCTGAAAAAAGGGCTCAGGAAGTATCTCTTAGGCTTG
TCAGACACCGAGTGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAA
TCCCCCGTGCAGCCTGTAGAGGACCTAGCTGGGAACTTATGGGAGAAGTTACGTGAAAAA
ATCAGGTCTTTTGTGGCATATTCTATCGCAATCGATGAGATCACGGATATAAATAATACC
ACCCAGTTGGCCATATTCATCCGTGGTGTCGATGAGAATTTCGATGTGTCCGAAGAACTT
CTGGACACGGTGCCCATGACGGGTACAAAATCTGGCAACGAGATCTTTTCGCGTGTTGAG
AAGAGCCTGAAAAAGTTCTGTATCGACTGGTCGAAATTAGTAAGCGTGGCCTCCACTGGC
ACCCCAGCGATGGTGGATGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCG
ACGTTCTGCAAGGGTGCGGAACTGAAGTCCATCTGTTGTATAATTCATCCGGAATCACTC
TGTGCTCAGAAGTTGAAGATGGACCACGTCATGGACGTGGTAGTGAAGTCCGTGAACTGG
ATATGCTCCCGGGGACTGAACCACAGTGAGTTCACAACCTTGCTCTATGAGCTGGACAGC
CAGTATGGTAGCCTCCTGTACTACACGGAGATTAAGTGGCTCAGTCGCGGGCTCGTGCTA
AAGAGATTTTTCGAATCCTTGGAAGAAATCGACTCCTTCATGTCATCCAGAGGGAAACCC
CTGCCTCAACTGAGCTCCATAGATTGGATCCGAGACCTGGCCTTCTTGGTTGACATGACG
ATGCATCTGAACGCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATG
TATGACCTGATCCGGGCGTTCCTAGCAAAACTGTGCCTCTGGGAGACTCATTTGACGAGG
AATAATCTGGCCCACTTTCCCACCCTGAAATTGGCTTCCAGAAATGAAAGCGATGGCCTG
AACTACATTCCCAAAATCGCGGAACTCAAGACCGAATTCCAGAAAAGGCTGTCTGATTTC
AAACTCTACGAAAGCGAACTGACTCTGTTCAGCTCCCCGTTCTCCACGAAGATCGACAGT
GTGCACGAGGAGCTCCAGATGGAGGTTATCGACCTGCAATGCAACACGGTCCTGAAGACG
AAATACGACAAGGTGGGAATACCAGAATTCTACAAGTACCTCTGGGGTAGCTACCCGAAA
TACAAGCACCATTGCGCAAAGATTCTTTCCATGTTCGGGAGCACCTACATCTGCGAACAG
CTGTTCTCCATTATGAAACTGAGCAAAACAAAATACTGCTCCCAGTTAAAGGATTCCCAG
TGGGATTCTGTACTCCACATCGCAACG

ORF Protein

Cloned ORF protein sequence for pF1KB0458 Download

>KIBB0458  949 aa
MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE
RGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYG
KALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN
RPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESED
PNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTN
SAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRK
ITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRK
IDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYMER
MRDEKLHELKKGLRKYLLGLSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREK
IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFSRVE
KSLKKFCIDWSKLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESL
CAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVL
KRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQM
YDLIRAFLAKLCLWETHLTRNNLAHFPTLKLASRNESDGLNYIPKIAELKTEFQKRLSDF
KLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPK
YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0458 Download

>pF1KB0458  5960 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCCAGGTA
GCAGTGTCCACCCTGCCTGTTGAAGAAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACA
TTCCTCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGGCCAAGTCCAAGGCAGAAGTG
GCCTGCATCGCAGTGTACGAAACAGACGTGTTTGTCGTCGGAACCGAGAGAGGATGCGCT
TTTGTTAATGCCAGGACGGATTTTCAGAAAGATTTTGCAAAATACTGCGTTGCAGAGGGA
CTGTGTGAGGTGAAACCTCCCTGCCCTGTGAACGGGATGCAGGTCCACTCGGGCGAAACG
GAAATACTCAGGAAGGCAGTGGAGGACTATTTCTGCTTTTGTTATGGTAAAGCCTTAGGG
ACAACAGTGATGGTGCCTGTTCCCTATGAGAAGATGCTGCGAGACCAGTCGGCTGTGGTA
GTGCAGGGGCTTCCGGAAGGCGTTGCCTTTCAACACCCTGAGAATTACGACCTTGCAACC
CTGAAATGGATTTTGGAGAACAAAGCAGGGATTTCATTCATCATAAATAGACCCTTCCTA
GGACCAGAGAGTCAGCTGGGTGGCCCTGGGATGGTAACAGATGCGGAGAGATCCATAGTA
TCACCAAGTGAAAGCTGCGGCCCCATCAATGTGAAAACTGAACCCATGGAAGATTCTGGC
ATTTCACTGAAAGCAGAAGCTGTCTCAGTCAAGAAAGAATCAGAAGATCCTAATTACTAT
CAATATAATATGCAAGGAAGCCACCCTTCTTCCACAAGCAATGAAGTAATAGAAATGGAA
TTACCAATGGAAGATTCCACTCCGCTGGTCCCTTCAGAAGAACCAAATGAGGACCCTGAA
GCCGAGGTGAAAATCGAAGGAAACACAAATTCATCCAGTGTTACAAATTCTGCAGCAGGT
GTTGAAGATCTTAACATCGTTCAAGTGACTGTTCCAGATAATGAGAAGGAAAGATTATCA
AGCATTGAAAAGATTAAACAGCTAAGAGAACAAGTTAATGACCTCTTTAGCCGAAAATTT
GGTGAAGCAATTGGCGTGGATTTCCCTGTGAAAGTTCCCTACAGGAAGATCACATTCAAC
CCTGGCTGTGTGGTGATTGATGGCATGCCCCCGGGGGTGGTATTCAAGGCCCCCGGCTAT
CTGGAAATCAGTTCCATGAGGAGGATCTTGGAGGCAGCTGAGTTTATCAAATTCACAGTC
ATCAGGCCGCTTCCAGGGCTTGAGCTCAGTAATGTGGGAAAACGCAAGATAGACCAGGAG
GGCCGTGTGTTTCAAGAAAAGTGGGAGAGAGCGTATTTCTTCGTGGAAGTACAGAATATT
CCAACATGTCTCATATGCAAACAAAGCATGTCTGTGTCCAAAGAATATAACCTAAGACGC
CACTATCAAACCAATCACAGCAAGCATTATGACCAGTATATGGAAAGAATGCGTGACGAG
AAGCTTCACGAGCTGAAAAAAGGGCTCAGGAAGTATCTCTTAGGCTTGTCAGACACCGAG
TGTCCCGAGCAAAAACAAGTGTTTGCAAACCCAAGTCCAACCCAGAAATCCCCCGTGCAG
CCTGTAGAGGACCTAGCTGGGAACTTATGGGAGAAGTTACGTGAAAAAATCAGGTCTTTT
GTGGCATATTCTATCGCAATCGATGAGATCACGGATATAAATAATACCACCCAGTTGGCC
ATATTCATCCGTGGTGTCGATGAGAATTTCGATGTGTCCGAAGAACTTCTGGACACGGTG
CCCATGACGGGTACAAAATCTGGCAACGAGATCTTTTCGCGTGTTGAGAAGAGCCTGAAA
AAGTTCTGTATCGACTGGTCGAAATTAGTAAGCGTGGCCTCCACTGGCACCCCAGCGATG
GTGGATGCCAATAACGGGCTTGTCACAAAACTGAAGTCCAGGGTGGCGACGTTCTGCAAG
GGTGCGGAACTGAAGTCCATCTGTTGTATAATTCATCCGGAATCACTCTGTGCTCAGAAG
TTGAAGATGGACCACGTCATGGACGTGGTAGTGAAGTCCGTGAACTGGATATGCTCCCGG
GGACTGAACCACAGTGAGTTCACAACCTTGCTCTATGAGCTGGACAGCCAGTATGGTAGC
CTCCTGTACTACACGGAGATTAAGTGGCTCAGTCGCGGGCTCGTGCTAAAGAGATTTTTC
GAATCCTTGGAAGAAATCGACTCCTTCATGTCATCCAGAGGGAAACCCCTGCCTCAACTG
AGCTCCATAGATTGGATCCGAGACCTGGCCTTCTTGGTTGACATGACGATGCATCTGAAC
GCTTTGAACATCTCTCTCCAAGGACACTCCCAAATCGTCACGCAGATGTATGACCTGATC
CGGGCGTTCCTAGCAAAACTGTGCCTCTGGGAGACTCATTTGACGAGGAATAATCTGGCC
CACTTTCCCACCCTGAAATTGGCTTCCAGAAATGAAAGCGATGGCCTGAACTACATTCCC
AAAATCGCGGAACTCAAGACCGAATTCCAGAAAAGGCTGTCTGATTTCAAACTCTACGAA
AGCGAACTGACTCTGTTCAGCTCCCCGTTCTCCACGAAGATCGACAGTGTGCACGAGGAG
CTCCAGATGGAGGTTATCGACCTGCAATGCAACACGGTCCTGAAGACGAAATACGACAAG
GTGGGAATACCAGAATTCTACAAGTACCTCTGGGGTAGCTACCCGAAATACAAGCACCAT
TGCGCAAAGATTCTTTCCATGTTCGGGAGCACCTACATCTGCGAACAGCTGTTCTCCATT
ATGAAACTGAGCAAAACAAAATACTGCTCCCAGTTAAAGGATTCCCAGTGGGATTCTGTA
CTCCACATCGCAACGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCG
ACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGC
TGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAG
GGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCA
GTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTT
TTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGG
ACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCA
GCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGC
AAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCT
GATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGT
TCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGC
TGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAG
ACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTG
GCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGAC
TGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCC
GAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACC
TGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCC
GGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTG
TTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGAT
GCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGC
CGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAA
GAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGAT
TCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGT
TCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACG
GTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAA
GGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGA
CGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAG
ATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCT
TACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACG
CTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACC
CCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGT
AAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTA
TGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGAC
AGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTC
TTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGAT
TACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGC
TCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTT
CACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGG
GATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGT
ACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTT
TTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTT
TAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCA
TCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTT
CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGG
CGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAG
CGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAA
AACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACG
CTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCG
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCA
TCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCAT