CADM4 ORF clone FXC04420

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Flexi ORF Clone FXC04420

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Clone info.

Species

human

Clone Name

pF1KB7234 Sequence (with vector) Restriction Map

Product ID

FXC04420

HaloTag Clone PID

FHC04420

ORF Sequence

DNA sequence (1164 bp)
Protein sequence (388 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528095]

Gene

KIBB7234

Symbol

CADM4

Alias : IGSF4C, NECL4, Necl-4, TSLL2, synCAM4

Description

cell adhesion molecule 4

Original Clone ID

oc00450

Features of the cloned ORF sequence

Description

Length: 1164 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 388 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS12627.1 3.7e-109 100.0 CADM4 CCDS53711.1 2.5e-39 40.8 CADM1 CCDS54613.1 1.1e-33 39.5 CADM2 CCDS8373.1 3e-32 38.2 CADM1 CCDS73398.1 3.1e-32 37.3 CADM1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR013106 28 117 PF07686 Immunoglobulin V-set IPR013162 130 206 PF08205 CD80-like IPR013098 227 304 PF07679 Immunoglobulin I-set HMMSmart IPR003599 29 121 SM00409 Immunoglobulin subtype IPR003599 130 221 SM00409 Immunoglobulin subtype IPR003598 136 206 SM00408 Immunoglobulin subtype 2 IPR003599 230 309 SM00409 Immunoglobulin subtype IPR003598 236 298 SM00408 Immunoglobulin subtype 2 IPR003585 344 362 SM00294 Neurexin/syndecan/glycophorin C ProfileScan IPR007110 124 219 PS50835 Immunoglobulin-like IPR007110 224 295 PS50835 Immunoglobulin-like
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 7 FQWPLLLLWAAAAGPGAGQEVQ 28 SECONDARY 22 2 323 YAIVGGILALLVFLIICVLVGMV 345 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_660339 388 609744 100.0 100.0 XP_016881941 369 609744 100.0 94.6 XP_005258677 345 609744 88.9 100.0 NP_001091987 414 605686 40.8 98.7 NP_001161147 404 609938 39.5 97.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7234 Download

>KIBB7234  1164 bp
ATGGGCCGGGCCCGGCGCTTCCAGTGGCCGCTGCTGCTGCTGTGGGCGGCCGCGGCGGGG
CCAGGGGCAGGACAGGAAGTACAGACAGAGAACGTGACAGTGGCTGAGGGTGGGGTGGCT
GAGATCACCTGCCGTCTGCACCAGTATGATGGGTCCATAGTTGTCATCCAGAACCCAGCC
CGGCAGACCCTCTTCTTCAATGGCACCCGTGCCTTGAAGGATGAGCGTTTCCAGCTTGAG
GAGTTCTCCCCACGCCGGGTGCGGATCCGGCTCTCAGATGCCCGCCTGGAGGACGAGGGG
GGCTATTTCTGCCAGCTCTACACAGAAGACACCCACCACCAGATTGCCACGCTCACGGTA
CTAGTGGCCCCAGAGAATCCTGTGGTGGAGGTCCGGGAGCAGGCGGTAGAGGGCGGCGAG
GTGGAGCTCAGCTGCCTCGTTCCGCGGTCCCGTCCGGCTGCCACCCTGCGCTGGTACCGG
GACCGCAAGGAGCTGAAAGGAGTGAGCAGCAGCCAGGAAAATGGCAAGGTCTGGAGCGTG
GCAAGCACAGTACGGTTTCGTGTGGACCGTAAGGACGACGGTGGTATCATCATCTGTGAG
GCGCAGAACCAGGCGCTGCCCTCCGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTG
CAGTACTCCCCCACGGCCCGGATTCATGCCTCCCAAGCTGTGGTGAGGGAGGGAGACACG
CTGGTGTTGACGTGTGCTGTCACGGGGAACCCCAGGCCAAACCAGATCCGCTGGAACCGC
GGGAATGAGTCTTTGCCGGAGAGGGCGGAGGCCGTGGGAGAGACGCTCACGCTGCCGGGT
CTGGTATCCGCGGATAACGGCACCTACACTTGCGAGGCGTCCAATAAGCACGGCCATGCG
AGGGCGCTCTACGTACTTGTGGTCTACGACCCTGGTGCGGTGGTAGAGGCTCAGACGTCG
GTTCCCTATGCCATTGTGGGCGGCATCCTGGCGCTGCTGGTGTTTCTGATCATATGTGTG
CTAGTGGGCATGGTCTGGTGCTCGGTACGGCAGAAGGGTTCCTATCTGACCCACGAAGCC
AGTGGCTTGGATGAACAGGGAGAAGCAAGAGAAGCCTTCCTCAATGGCAGCGACGGACAC
AAGAGGAAAGAGGAATTCTTCATC

ORF Protein

Cloned ORF protein sequence for pF1KB7234 Download

>KIBB7234  388 aa
MGRARRFQWPLLLLWAAAAGPGAGQEVQTENVTVAEGGVAEITCRLHQYDGSIVVIQNPA
RQTLFFNGTRALKDERFQLEEFSPRRVRIRLSDARLEDEGGYFCQLYTEDTHHQIATLTV
LVAPENPVVEVREQAVEGGEVELSCLVPRSRPAATLRWYRDRKELKGVSSSQENGKVWSV
ASTVRFRVDRKDDGGIIICEAQNQALPSGHSKQTQYVLDVQYSPTARIHASQAVVREGDT
LVLTCAVTGNPRPNQIRWNRGNESLPERAEAVGETLTLPGLVSADNGTYTCEASNKHGHA
RALYVLVVYDPGAVVEAQTSVPYAIVGGILALLVFLIICVLVGMVWCSVRQKGSYLTHEA
SGLDEQGEAREAFLNGSDGHKRKEEFFI

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7234 Download

>pF1KB7234  4277 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCCGGGCC
CGGCGCTTCCAGTGGCCGCTGCTGCTGCTGTGGGCGGCCGCGGCGGGGCCAGGGGCAGGA
CAGGAAGTACAGACAGAGAACGTGACAGTGGCTGAGGGTGGGGTGGCTGAGATCACCTGC
CGTCTGCACCAGTATGATGGGTCCATAGTTGTCATCCAGAACCCAGCCCGGCAGACCCTC
TTCTTCAATGGCACCCGTGCCTTGAAGGATGAGCGTTTCCAGCTTGAGGAGTTCTCCCCA
CGCCGGGTGCGGATCCGGCTCTCAGATGCCCGCCTGGAGGACGAGGGGGGCTATTTCTGC
CAGCTCTACACAGAAGACACCCACCACCAGATTGCCACGCTCACGGTACTAGTGGCCCCA
GAGAATCCTGTGGTGGAGGTCCGGGAGCAGGCGGTAGAGGGCGGCGAGGTGGAGCTCAGC
TGCCTCGTTCCGCGGTCCCGTCCGGCTGCCACCCTGCGCTGGTACCGGGACCGCAAGGAG
CTGAAAGGAGTGAGCAGCAGCCAGGAAAATGGCAAGGTCTGGAGCGTGGCAAGCACAGTA
CGGTTTCGTGTGGACCGTAAGGACGACGGTGGTATCATCATCTGTGAGGCGCAGAACCAG
GCGCTGCCCTCCGGACACAGCAAGCAGACGCAGTACGTGCTGGATGTGCAGTACTCCCCC
ACGGCCCGGATTCATGCCTCCCAAGCTGTGGTGAGGGAGGGAGACACGCTGGTGTTGACG
TGTGCTGTCACGGGGAACCCCAGGCCAAACCAGATCCGCTGGAACCGCGGGAATGAGTCT
TTGCCGGAGAGGGCGGAGGCCGTGGGAGAGACGCTCACGCTGCCGGGTCTGGTATCCGCG
GATAACGGCACCTACACTTGCGAGGCGTCCAATAAGCACGGCCATGCGAGGGCGCTCTAC
GTACTTGTGGTCTACGACCCTGGTGCGGTGGTAGAGGCTCAGACGTCGGTTCCCTATGCC
ATTGTGGGCGGCATCCTGGCGCTGCTGGTGTTTCTGATCATATGTGTGCTAGTGGGCATG
GTCTGGTGCTCGGTACGGCAGAAGGGTTCCTATCTGACCCACGAAGCCAGTGGCTTGGAT
GAACAGGGAGAAGCAAGAGAAGCCTTCCTCAATGGCAGCGACGGACACAAGAGGAAAGAG
GAATTCTTCATCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT