SPNS1 ORF clone FXC08366

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Flexi ORF Clone FXC08366

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Clone info.

Species

human

Clone Name

pF1KB0485 Sequence (with vector) Restriction Map

Product ID

FXC08366

HaloTag Clone PID

FHC08366

ORF Sequence

DNA sequence (1584 bp)
Protein sequence (528 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528362]

Gene

KIBB0485

Symbol

SPNS1

Alias : HSpin1, LAT, PP2030, SLC62A1, SLC63A1, SPIN1, SPINL, nrs

Description

spinster homolog 1 (Drosophila), transcript variant 1

Original Clone ID

cs01985

Features of the cloned ORF sequence

Description

Length: 1584 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 528 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10646.1 2e-190 100.0 SPNS1 CCDS45454.1 2e-162 100.0 SPNS1 CCDS45452.1 1.6e-96 90.2 SPNS1 CCDS42237.1 8.6e-89 54.0 SPNS2 CCDS11045.1 8.5e-87 54.0 SPNS3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR011701 68 416 PF07690 Major facilitator superfamily ProfileScan IPR020846 61 489 PS50850 Major facilitator superfamily domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 53 LSPGRSALIVAVLCYINLLNYMD 75 PRIMARY 23 2 97 SGLIQTVFISSYMVLAPVFGYLG 119 PRIMARY 23 3 126 YLMCGGIAFWSLVTLGSSFIPG 147 SECONDARY 22 4 149 HFWLLLLTRGLVGVGEASYSTIA 171 SECONDARY 23 5 186 RMLSIFYFAIPVGSGLGYIAGSK 208 SECONDARY 23 6 219 ALRVTPGLGVVAVLLLFLVVREP 241 PRIMARY 23 7 274 VLSSLGFTAVAFVTGSLALWAPA 296 SECONDARY 23 8 320 SDSLIFGLITCLTGVLGVGLGVE 342 SECONDARY 23 9 353 RADPLVCATGLLGSAPFLFLSLA 375 SECONDARY 23 10 381 IVATYIFIFIGETLLSMNWAIVA 403 PRIMARY 23 11 463 SLMLCAFVGALGGAAFLGTAIFI 485 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_114427 528 612583 100.0 100.0 NP_001135920 528 612583 100.0 100.0 XP_016879248 573 612583 100.0 100.0 XP_016879247 578 612583 99.1 100.0 NP_001135922 455 612583 100.0 86.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB0485 Download

>KIBB0485  1584 bp
ATGGCCGGGTCCGACACCGCGCCCTTCCTCAGCCAGGCGGATGACCCGGACGACGGGCCA
GTGCCTGGCACCCCGGGGTTGCCAGGGTCCACGGGGAACCCGAAGTCCGAGGAGCCCGAG
GTCCCGGACCAGGAGGGGCTGCAGCGCATCACCGGCCTGTCTCCCGGCCGTTCGGCTCTC
ATAGTGGCGGTGCTGTGCTACATCAATCTCCTGAACTACATGGACCGCTTCACCGTGGCT
GGCGTCCTTCCCGACATCGAGCAGTTCTTCAACATCGGGGACAGTAGCTCTGGGCTCATC
CAGACCGTGTTCATCTCCAGTTACATGGTGTTGGCACCTGTGTTTGGCTACCTGGGTGAC
AGGTACAATCGGAAGTATCTCATGTGCGGGGGCATTGCCTTCTGGTCCCTGGTGACACTG
GGGTCATCCTTCATCCCCGGAGAGCATTTCTGGCTGCTCCTCCTGACCCGGGGCCTGGTG
GGGGTCGGGGAGGCCAGTTATTCCACCATCGCGCCCACTCTCATTGCCGACCTCTTTGTG
GCCGACCAGCGGAGCCGGATGCTCAGCATCTTCTACTTTGCCATTCCGGTGGGCAGTGGT
CTGGGCTACATTGCAGGCTCCAAAGTGAAGGATATGGCTGGAGACTGGCACTGGGCTCTG
AGGGTGACACCGGGTCTAGGAGTGGTGGCCGTTCTGCTGCTGTTCCTGGTAGTGCGGGAG
CCGCCAAGGGGAGCCGTGGAGCGCCACTCAGATTTGCCACCCCTGAACCCCACCTCGTGG
TGGGCAGATCTGAGGGCTCTGGCAAGAAATCCTAGTTTCGTCCTGTCTTCCCTGGGCTTC
ACTGCTGTGGCCTTTGTCACGGGCTCCCTGGCTCTGTGGGCTCCGGCATTCCTGCTGCGT
TCCCGCGTGGTCCTTGGGGAGACCCCACCCTGCCTTCCCGGAGACTCCTGCTCTTCCTCT
GACAGTCTCATCTTTGGACTCATCACCTGCCTGACCGGAGTCCTGGGTGTGGGCCTGGGT
GTGGAGATCAGCCGCCGGCTCCGCCACTCCAACCCCCGGGCTGATCCCCTGGTCTGTGCC
ACTGGCCTCCTGGGCTCTGCACCCTTCCTCTTCCTGTCCCTTGCCTGCGCCCGTGGTAGC
ATCGTGGCCACTTATATTTTCATCTTCATTGGAGAGACCCTCCTGTCCATGAACTGGGCC
ATCGTGGCCGACATTCTGCTGTACGTGGTGATCCCTACCCGACGCTCCACCGCCGAGGCC
TTCCAGATCGTGCTGTCCCACCTGCTGGGTGATGCTGGGAGCCCCTACCTCATTGGCCTG
ATCTCTGACCGCCTGCGCCGGAACTGGCCCCCCTCCTTCTTGTCCGAGTTCCGGGCTCTG
CAGTTCTCGCTCATGCTCTGCGCGTTTGTTGGGGCACTGGGCGGCGCAGCCTTCCTGGGC
ACCGCCATCTTCATTGAGGCCGACCGCCGGCGGGCACAGCTGCACGTGCAGGGCCTGCTG
CACGAAGCAGGGTCCACAGACGACCGGATTGTGGTGCCCCAGCGGGGCCGCTCCACCCGC
GTGCCCGTGGCCAGTGTGCTCATC

ORF Protein

Cloned ORF protein sequence for pF1KB0485 Download

>KIBB0485  528 aa
MAGSDTAPFLSQADDPDDGPVPGTPGLPGSTGNPKSEEPEVPDQEGLQRITGLSPGRSAL
IVAVLCYINLLNYMDRFTVAGVLPDIEQFFNIGDSSSGLIQTVFISSYMVLAPVFGYLGD
RYNRKYLMCGGIAFWSLVTLGSSFIPGEHFWLLLLTRGLVGVGEASYSTIAPTLIADLFV
ADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMAGDWHWALRVTPGLGVVAVLLLFLVVRE
PPRGAVERHSDLPPLNPTSWWADLRALARNPSFVLSSLGFTAVAFVTGSLALWAPAFLLR
SRVVLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCA
TGLLGSAPFLFLSLACARGSIVATYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEA
FQIVLSHLLGDAGSPYLIGLISDRLRRNWPPSFLSEFRALQFSLMLCAFVGALGGAAFLG
TAIFIEADRRRAQLHVQGLLHEAGSTDDRIVVPQRGRSTRVPVASVLI

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB0485 Download

>pF1KB0485  4697 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCGGGTCC
GACACCGCGCCCTTCCTCAGCCAGGCGGATGACCCGGACGACGGGCCAGTGCCTGGCACC
CCGGGGTTGCCAGGGTCCACGGGGAACCCGAAGTCCGAGGAGCCCGAGGTCCCGGACCAG
GAGGGGCTGCAGCGCATCACCGGCCTGTCTCCCGGCCGTTCGGCTCTCATAGTGGCGGTG
CTGTGCTACATCAATCTCCTGAACTACATGGACCGCTTCACCGTGGCTGGCGTCCTTCCC
GACATCGAGCAGTTCTTCAACATCGGGGACAGTAGCTCTGGGCTCATCCAGACCGTGTTC
ATCTCCAGTTACATGGTGTTGGCACCTGTGTTTGGCTACCTGGGTGACAGGTACAATCGG
AAGTATCTCATGTGCGGGGGCATTGCCTTCTGGTCCCTGGTGACACTGGGGTCATCCTTC
ATCCCCGGAGAGCATTTCTGGCTGCTCCTCCTGACCCGGGGCCTGGTGGGGGTCGGGGAG
GCCAGTTATTCCACCATCGCGCCCACTCTCATTGCCGACCTCTTTGTGGCCGACCAGCGG
AGCCGGATGCTCAGCATCTTCTACTTTGCCATTCCGGTGGGCAGTGGTCTGGGCTACATT
GCAGGCTCCAAAGTGAAGGATATGGCTGGAGACTGGCACTGGGCTCTGAGGGTGACACCG
GGTCTAGGAGTGGTGGCCGTTCTGCTGCTGTTCCTGGTAGTGCGGGAGCCGCCAAGGGGA
GCCGTGGAGCGCCACTCAGATTTGCCACCCCTGAACCCCACCTCGTGGTGGGCAGATCTG
AGGGCTCTGGCAAGAAATCCTAGTTTCGTCCTGTCTTCCCTGGGCTTCACTGCTGTGGCC
TTTGTCACGGGCTCCCTGGCTCTGTGGGCTCCGGCATTCCTGCTGCGTTCCCGCGTGGTC
CTTGGGGAGACCCCACCCTGCCTTCCCGGAGACTCCTGCTCTTCCTCTGACAGTCTCATC
TTTGGACTCATCACCTGCCTGACCGGAGTCCTGGGTGTGGGCCTGGGTGTGGAGATCAGC
CGCCGGCTCCGCCACTCCAACCCCCGGGCTGATCCCCTGGTCTGTGCCACTGGCCTCCTG
GGCTCTGCACCCTTCCTCTTCCTGTCCCTTGCCTGCGCCCGTGGTAGCATCGTGGCCACT
TATATTTTCATCTTCATTGGAGAGACCCTCCTGTCCATGAACTGGGCCATCGTGGCCGAC
ATTCTGCTGTACGTGGTGATCCCTACCCGACGCTCCACCGCCGAGGCCTTCCAGATCGTG
CTGTCCCACCTGCTGGGTGATGCTGGGAGCCCCTACCTCATTGGCCTGATCTCTGACCGC
CTGCGCCGGAACTGGCCCCCCTCCTTCTTGTCCGAGTTCCGGGCTCTGCAGTTCTCGCTC
ATGCTCTGCGCGTTTGTTGGGGCACTGGGCGGCGCAGCCTTCCTGGGCACCGCCATCTTC
ATTGAGGCCGACCGCCGGCGGGCACAGCTGCACGTGCAGGGCCTGCTGCACGAAGCAGGG
TCCACAGACGACCGGATTGTGGTGCCCCAGCGGGGCCGCTCCACCCGCGTGCCCGTGGCC
AGTGTGCTCATCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT