RAE1 ORF clone FXC10383

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Flexi ORF Clone FXC10383

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Clone info.

Species

human

Clone Name

pF1KB5360 Sequence (with vector) Restriction Map

Product ID

FXC10383

HaloTag Clone PID

FHC10383

Original Clone PID

ORK10383

ORF Sequence

DNA sequence (1104 bp)
Protein sequence (368 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528558]

Gene

KIBB5360

Symbol

RAE1

Alias : Gle2, MIG14, MRNP41, Mnrp41, dJ481F12.3, dJ800J21.1

Description

ribonucleic acid export 1, transcript variant 1

Original Clone ID

bm04279

Features of the cloned ORF sequence

Description

Length: 1104 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 368 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13458.1 7.3e-135 100.0 RAE1 CCDS31306.1 1.2e-30 35.2 BUB3 CCDS7635.1 1.2e-30 35.2 BUB3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020472 101 115 PR00320 G-protein beta WD-40 repeat IPR020472 144 158 PR00320 G-protein beta WD-40 repeat IPR020472 288 302 PR00320 G-protein beta WD-40 repeat HMMPfam IPR019781 36 70 PF00400 WD40 repeat IPR019781 85 114 PF00400 WD40 repeat IPR019781 126 157 PF00400 WD40 repeat IPR019781 275 301 PF00400 WD40 repeat HMMSmart IPR001680 28 70 SM00320 WD40 repeat IPR001680 76 114 SM00320 WD40 repeat IPR001680 117 157 SM00320 WD40 repeat IPR001680 250 301 SM00320 WD40 repeat ProfileScan IPR017986 35 166 PS50294 WD40-repeat-containing domain IPR019782 82 123 PS50082 WD40 repeat 2 IPR019782 123 166 PS50082 WD40 repeat 2 IPR019782 276 310 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003601 368 603343 100.0 100.0 XP_005260639 368 603343 100.0 100.0 NP_001015885 368 603343 100.0 100.0 XP_011527390 368 603343 100.0 100.0 XP_011527391 368 603343 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5360 Download

>KIBB5360  1104 bp
ATGAGCCTGTTTGGAACAACCTCAGGTTTTGGAACCAGTGGGACCAGCATGTTTGGCAGT
GCAACTACAGACAATCACAATCCCATGAAGGATATTGAAGTAACATCATCTCCTGATGAT
AGCATTGGTTGTCTGTCTTTTAGCCCACCAACCTTGCCGGGGAACTTTCTTATTGCAGGA
TCATGGGCTAATGATGTTCGCTGCTGGGAAGTTCAAGACAGTGGACAGACCATTCCAAAA
GCCCAGCAGATGCACACTGGGCCTGTGCTTGATGTCTGCTGGAGTGACGATGGGAGCAAA
GTGTTTACGGCATCGTGTGATAAAACTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCG
ATACAGATCGCACAGCATGATGCTCCTGTTAAAACCATCCATTGGATCAAAGCTCCAAAC
TACAGCTGTGTGATGACTGGGAGCTGGGATAAGACTTTAAAGTTTTGGGATACTCGATCG
TCAAATCCTATGATGGTTTTGCAACTCCCTGAAAGGTGTTACTGTGCTGACGTGATATAC
CCCATGGCTGTGGTGGCAACTGCAGAGAGGGGCCTGATTGTCTATCAGCTAGAGAATCAA
CCTTCTGAATTCAGGAGGATAGAATCTCCACTGAAACATCAGCATCGGTGTGTGGCTATT
TTTAAAGACAAACAGAACAAGCCTACTGGTTTTGCCCTGGGAAGTATCGAGGGGAGAGTT
GCTATTCACTATATCAACCCCCCGAACCCCGCCAAAGATAACTTCACCTTTAAATGTCAT
CGATCTAATGGAACCAACACTTCAGCTCCTCAGGACATTTATGCGGTAAATGGAATCGCG
TTCCATCCTGTTCATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGG
GACAAAGATGCCAGAACAAAACTAAAAACTTCGGAACAGTTAGATCAGCCCATCTCAGCT
TGCTGTTTCAATCACAATGGAAACATATTTGCATACGCTTCCAGCTACGACTGGTCAAAG
GGACATGAATTTTATAATCCCCAGAAAAAAAATTACATTTTCCTGCGTAATGCAGCCGAA
GAGCTAAAGCCCAGGAATAAGAAG

ORF Protein

Cloned ORF protein sequence for pF1KB5360 Download

>KIBB5360  368 aa
MSLFGTTSGFGTSGTSMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5360 Download

>pF1KB5360  4217 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCCTGTTT
GGAACAACCTCAGGTTTTGGAACCAGTGGGACCAGCATGTTTGGCAGTGCAACTACAGAC
AATCACAATCCCATGAAGGATATTGAAGTAACATCATCTCCTGATGATAGCATTGGTTGT
CTGTCTTTTAGCCCACCAACCTTGCCGGGGAACTTTCTTATTGCAGGATCATGGGCTAAT
GATGTTCGCTGCTGGGAAGTTCAAGACAGTGGACAGACCATTCCAAAAGCCCAGCAGATG
CACACTGGGCCTGTGCTTGATGTCTGCTGGAGTGACGATGGGAGCAAAGTGTTTACGGCA
TCGTGTGATAAAACTGCCAAAATGTGGGACCTCAGCAGTAACCAAGCGATACAGATCGCA
CAGCATGATGCTCCTGTTAAAACCATCCATTGGATCAAAGCTCCAAACTACAGCTGTGTG
ATGACTGGGAGCTGGGATAAGACTTTAAAGTTTTGGGATACTCGATCGTCAAATCCTATG
ATGGTTTTGCAACTCCCTGAAAGGTGTTACTGTGCTGACGTGATATACCCCATGGCTGTG
GTGGCAACTGCAGAGAGGGGCCTGATTGTCTATCAGCTAGAGAATCAACCTTCTGAATTC
AGGAGGATAGAATCTCCACTGAAACATCAGCATCGGTGTGTGGCTATTTTTAAAGACAAA
CAGAACAAGCCTACTGGTTTTGCCCTGGGAAGTATCGAGGGGAGAGTTGCTATTCACTAT
ATCAACCCCCCGAACCCCGCCAAAGATAACTTCACCTTTAAATGTCATCGATCTAATGGA
ACCAACACTTCAGCTCCTCAGGACATTTATGCGGTAAATGGAATCGCGTTCCATCCTGTT
CATGGCACCCTTGCAACTGTGGGATCTGATGGTAGATTCAGCTTCTGGGACAAAGATGCC
AGAACAAAACTAAAAACTTCGGAACAGTTAGATCAGCCCATCTCAGCTTGCTGTTTCAAT
CACAATGGAAACATATTTGCATACGCTTCCAGCTACGACTGGTCAAAGGGACATGAATTT
TATAATCCCCAGAAAAAAAATTACATTTTCCTGCGTAATGCAGCCGAAGAGCTAAAGCCC
AGGAATAAGAAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT