RBM17 ORF clone FXC11233

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC11233

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Clone info.

Species

human

Clone Name

pF1KE0688 Sequence (with vector) Restriction Map

Product ID

FXC11233

HaloTag Clone PID

FHC11233

ORF Sequence

DNA sequence (1203 bp)
Protein sequence (401 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528910]

Gene

KIEE0688

Symbol

RBM17

Alias : SPF45

Description

RNA binding motif protein 17, transcript variant 1

Original Clone ID

cs02188

Features of the cloned ORF sequence

Description

Length: 1203 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 401 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS7077.1 4.6e-103 100.0 RBM17 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000467 238 276 PF01585 D111/G-patch HMMSmart IPR000467 233 279 SM00443 D111/G-patch IPR003954 306 385 SM00361 RNA recognition motif domain ProfileScan IPR000467 235 275 PS50174 D111/G-patch
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001139019 401 606935 100.0 100.0 NP_116294 401 606935 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0688 Download

>KIEE0688  1203 bp
ATGTCCCTGTACGATGACCTAGGAGTGGAGACCAGTGACTCAAAAACAGAAGGCTGGTCC
AAAAACTTCAAACTTCTGCAGTCTCAGCTTCAGGTGAAGAAGGCAGCTCTCACTCAGGCA
AAGAGCCAAAGGACGAAACAAAGTACAGTCCTCGCCCCAGTCATTGACCTGAAGCGAGGT
GGCTCCTCAGATGACCGGCAAATTGTGGACACTCCACCGCATGTAGCAGCTGGGCTGAAG
GATCCTGTTCCCAGTGGGTTTTCTGCAGGGGAAGTTCTGATTCCCTTAGCTGACGAATAT
GACCCTATGTTTCCTAATGATTATGAGAAAGTAGTGAAGCGCCAAAGAGAGGAACGACAG
AGACAGCGGGAGCTGGAAAGACAAAAGGAAATAGAAGAAAGGGAAAAAAGGCGTAAAGAC
AGACATGAAGCAAGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGATGAAGATGAAGAT
TATGAGCGAGAGAGGAGGAAAAGAAGTATGGGCGGAGCTGCCATTGCCCCACCCACTTCT
CTGGTAGAGAAAGACAAAGAGTTACCCCGAGATTTTCCTTATGAAGAGGACTCAAGACCT
CGATCACAGTCTTCCAAAGCAGCCATTCCTCCCCCAGTGTACGAGGAACAAGACAGACCG
AGATCTCCAACCGGACCTAGCAACTCCTTCCTCGCTAACATGGGGGGCACGGTGGCGCAC
AAGATCATGCAGAAGTACGGCTTCCGGGAGGGCCAGGGTCTGGGGAAGCATGAGCAGGGC
CTGAGCACTGCCTTGTCAGTGGAGAAGACCAGCAAGCGTGGCGGCAAGATCATCGTGGGC
GACGCCACAGAGAAAGATGCATCCAAGAAGTCAGATTCAAATCCGCTGACTGAAATACTT
AAGTGTCCTACTAAAGTGGTCTTACTAAGGAACATGGTTGGTGCGGGAGAGGTGGATGAA
GACTTGGAAGTTGAAACCAAGGAAGAATGTGAAAAATATGGCAAAGTTGGAAAATGTGTG
ATATTTGAAATTCCTGGTGCCCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAG
AGAGTTGAATCAGCAATTAAAGCGGTTGTTGACTTGAATGGGAGGTATTTTGGTGGACGG
GTGGTAAAAGCATGTTTCTACAATTTGGACAAATTCAGGGTCTTGGATTTGGCAGAACAA
GTT

ORF Protein

Cloned ORF protein sequence for pF1KE0688 Download

>KIEE0688  401 aa
MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDLKRG
GSSDDRQIVDTPPHVAAGLKDPVPSGFSAGEVLIPLADEYDPMFPNDYEKVVKRQREERQ
RQRELERQKEIEEREKRRKDRHEASGFARRPDPDSDEDEDYERERRKRSMGGAAIAPPTS
LVEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLANMGGTVAH
KIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIVGDATEKDASKKSDSNPLTEIL
KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFE
RVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLDLAEQV

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0688 Download

>pF1KE0688  4316 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCCTGTAC
GATGACCTAGGAGTGGAGACCAGTGACTCAAAAACAGAAGGCTGGTCCAAAAACTTCAAA
CTTCTGCAGTCTCAGCTTCAGGTGAAGAAGGCAGCTCTCACTCAGGCAAAGAGCCAAAGG
ACGAAACAAAGTACAGTCCTCGCCCCAGTCATTGACCTGAAGCGAGGTGGCTCCTCAGAT
GACCGGCAAATTGTGGACACTCCACCGCATGTAGCAGCTGGGCTGAAGGATCCTGTTCCC
AGTGGGTTTTCTGCAGGGGAAGTTCTGATTCCCTTAGCTGACGAATATGACCCTATGTTT
CCTAATGATTATGAGAAAGTAGTGAAGCGCCAAAGAGAGGAACGACAGAGACAGCGGGAG
CTGGAAAGACAAAAGGAAATAGAAGAAAGGGAAAAAAGGCGTAAAGACAGACATGAAGCA
AGTGGGTTTGCAAGGAGACCAGATCCAGATTCTGATGAAGATGAAGATTATGAGCGAGAG
AGGAGGAAAAGAAGTATGGGCGGAGCTGCCATTGCCCCACCCACTTCTCTGGTAGAGAAA
GACAAAGAGTTACCCCGAGATTTTCCTTATGAAGAGGACTCAAGACCTCGATCACAGTCT
TCCAAAGCAGCCATTCCTCCCCCAGTGTACGAGGAACAAGACAGACCGAGATCTCCAACC
GGACCTAGCAACTCCTTCCTCGCTAACATGGGGGGCACGGTGGCGCACAAGATCATGCAG
AAGTACGGCTTCCGGGAGGGCCAGGGTCTGGGGAAGCATGAGCAGGGCCTGAGCACTGCC
TTGTCAGTGGAGAAGACCAGCAAGCGTGGCGGCAAGATCATCGTGGGCGACGCCACAGAG
AAAGATGCATCCAAGAAGTCAGATTCAAATCCGCTGACTGAAATACTTAAGTGTCCTACT
AAAGTGGTCTTACTAAGGAACATGGTTGGTGCGGGAGAGGTGGATGAAGACTTGGAAGTT
GAAACCAAGGAAGAATGTGAAAAATATGGCAAAGTTGGAAAATGTGTGATATTTGAAATT
CCTGGTGCCCCTGATGATGAAGCAGTACGGATATTTTTAGAATTTGAGAGAGTTGAATCA
GCAATTAAAGCGGTTGTTGACTTGAATGGGAGGTATTTTGGTGGACGGGTGGTAAAAGCA
TGTTTCTACAATTTGGACAAATTCAGGGTCTTGGATTTGGCAGAACAAGTTGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT