OR10D1P ORF clone FXC11297

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Flexi ORF Clone FXC11297

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Clone info.

Species

human

Clone Name

pF1KE0833 Sequence (with vector) Restriction Map

Product ID

FXC11297

HaloTag Clone PID

FHC11297

ORF Sequence

DNA sequence (672 bp)
Protein sequence (224 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529259]

Gene

KIEE0833

Symbol

OR10D1P

Alias : HTPCRX03, OR10D2P, OST074

Description

olfactory receptor, family 10, subfamily D, member 1 pseudogene

Original Clone ID

cp01233

Features of the cloned ORF sequence

Description

Length: 672 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 224 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS31705.1 8.2e-34 54.2 OR10G7 CCDS31702.1 1.3e-33 54.7 OR10G4 CCDS31703.1 3.6e-33 54.7 OR10G9 CCDS32047.1 1e-30 48.9 OR10G2 CCDS31704.1 1e-30 51.1 OR10G8 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 24 48 PR00237 GPCR IPR000276 57 78 PR00237 GPCR IPR000725 90 101 PR00245 Olfactory receptor IPR000276 102 124 PR00237 GPCR IPR000725 127 139 PR00245 Olfactory receptor IPR000725 174 190 PR00245 Olfactory receptor HMMPfam IPR000276 39 219 PF00001 GPCR ProfileScan IPR017452 39 224 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 28 LFLSFYIFTLMGNLLILLAIVSS 50 PRIMARY 23 2 98 QLFFYHFLGCTECFLYTVMAYDR 120 SECONDARY 23 3 138 ACIILAMGTSFFGCIQATFLTTL 160 SECONDARY 23 4 202 GLMPLSCFLLILTSYSGIVFSIL 224 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001005216 311 615016,615082 42.8 99.1 NP_835462 317 608493 45.8 99.1 NP_006628 314 608496 40.8 99.6 NP_003691 308 608494 41.3 99.1 XP_011513214 300 600578 41.4 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0833 Download

>KIEE0833  672 bp
ATGAGGAATTTCTCGGTGGTGTCCGAATTCATCCTGCTGGGCATCCCTCACACGGAGGGT
CTGGAGACTATTCTGTTGGTCCTGTTTTTGTCCTTCTACATCTTCACCCTTATGGGGAAC
CTGCTCATCTTGCTGGCTATTGTCTCCTCTGCTCGGCTTCACACGCCCATGTACTTCTTC
CTGTGCAAGCTGTCTGTTTTTGACCTATTTTTCCCTTCTGTGAGTTCCCCTAAGATGCTG
TGCTATCTTTCAGGGAACAGCCGAGCCATCTCCTATGCAGGCTGTGCATCCCAGCTCTTC
TTCTACCATTTCCTGGGCTGCACTGAGTGTTTCCTGTACACGGTGATGGCCTACGACCGC
TTTGTTGCCATTTGTCACCCTCTACGCTACACCATAATCATGAGCCACAGAGCGTGTATC
ATCCTAGCCATGGGGACCTCATTCTTTGGCTGCATTCAGGCCACCTTTCTGACCACTCTC
ACCTTCCAATTGCCTTACTGTGTCCCCAATGAGGTGGACTATTATTTCTGTGATATCCCA
GTCATGCTGAAGCTGGCTTGTGCAGATACCTCAGCCCTGGAGATGGTGGGGTTCATCAGT
GTGGGCCTCATGCCCCTCAGCTGTTTCCTTCTCATCCTCACCTCCTACAGTGGCATCGTC
TTCTCCATCTTG

ORF Protein

Cloned ORF protein sequence for pF1KE0833 Download

>KIEE0833  224 aa
MRNFSVVSEFILLGIPHTEGLETILLVLFLSFYIFTLMGNLLILLAIVSSARLHTPMYFF
LCKLSVFDLFFPSVSSPKMLCYLSGNSRAISYAGCASQLFFYHFLGCTECFLYTVMAYDR
FVAICHPLRYTIIMSHRACIILAMGTSFFGCIQATFLTTLTFQLPYCVPNEVDYYFCDIP
VMLKLACADTSALEMVGFISVGLMPLSCFLLILTSYSGIVFSIL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0833 Download

>pF1KE0833  3785 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGGAATTTC
TCGGTGGTGTCCGAATTCATCCTGCTGGGCATCCCTCACACGGAGGGTCTGGAGACTATT
CTGTTGGTCCTGTTTTTGTCCTTCTACATCTTCACCCTTATGGGGAACCTGCTCATCTTG
CTGGCTATTGTCTCCTCTGCTCGGCTTCACACGCCCATGTACTTCTTCCTGTGCAAGCTG
TCTGTTTTTGACCTATTTTTCCCTTCTGTGAGTTCCCCTAAGATGCTGTGCTATCTTTCA
GGGAACAGCCGAGCCATCTCCTATGCAGGCTGTGCATCCCAGCTCTTCTTCTACCATTTC
CTGGGCTGCACTGAGTGTTTCCTGTACACGGTGATGGCCTACGACCGCTTTGTTGCCATT
TGTCACCCTCTACGCTACACCATAATCATGAGCCACAGAGCGTGTATCATCCTAGCCATG
GGGACCTCATTCTTTGGCTGCATTCAGGCCACCTTTCTGACCACTCTCACCTTCCAATTG
CCTTACTGTGTCCCCAATGAGGTGGACTATTATTTCTGTGATATCCCAGTCATGCTGAAG
CTGGCTTGTGCAGATACCTCAGCCCTGGAGATGGTGGGGTTCATCAGTGTGGGCCTCATG
CCCCTCAGCTGTTTCCTTCTCATCCTCACCTCCTACAGTGGCATCGTCTTCTCCATCTTG
GTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCA
AGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGA
GCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAA
AGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCA
TGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGAT
AGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGT
GTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAA
GAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATG
GCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGA
TGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGG
GTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCC
GTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGT
GCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTT
CCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGC
GAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATC
ATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCAC
CAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAG
GATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAG
GCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAAT
ATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCG
GACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAA
TGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCC
TTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACC
AAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATC
AGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAA
AAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAA
TCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCC
CCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTC
CGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAG
TTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGA
CCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATC
GCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTAC
AGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTG
CGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACA
AACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAA
AGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAA
CTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTT
ATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATG
AAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCAT
AGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGT
TGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAA
TTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCA
GTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGAT
TAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGT
GGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGT
GGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGT
CGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGA
CAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAG
GACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCC
TTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCG
CTCAT