OR1C1 ORF clone FXC11337

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Flexi ORF Clone FXC11337

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Clone info.

Species

human

Clone Name

pF1KE0883 Sequence (with vector) Restriction Map

Product ID

FXC11337

HaloTag Clone PID

FHC11337

ORF Sequence

DNA sequence (942 bp)
Protein sequence (314 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529299]

Gene

KIEE0883

Symbol

OR1C1

Alias : HSTPCR27, OR1-42, OR1.5.10, ORL211, TPCR27

Description

olfactory receptor, family 1, subfamily C, member 1

Original Clone ID

cp01283

Features of the cloned ORF sequence

Description

Length: 942 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 314 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS41481.1 5e-79 100.0 OR1C1 CCDS10496.1 5.3e-46 60.0 OR1F1 CCDS35122.1 9.7e-42 53.4 OR1J4 CCDS11020.1 6.9e-41 53.8 OR1G1 CCDS35120.1 1.8e-40 53.1 OR1J1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 176 192 PR00245 Olfactory receptor IPR000276 199 222 PR00237 GPCR IPR000725 236 245 PR00245 Olfactory receptor IPR000276 272 298 PR00237 GPCR IPR000725 283 294 PR00245 Olfactory receptor HMMPfam IPR000276 41 290 PF00001 GPCR ProfileScan IPR017452 41 290 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 27 LSVLFLCMYLATTLGNMLIIATI 49 SECONDARY 23 2 62 FLSNLAFVDICFTSTTVPQMVVN 84 SECONDARY 23 3 95 AGCLTQLFFFVSFVNMDSLLLCV 117 PRIMARY 23 4 146 AGLWLVTYLHALLHTVLIAQLSF 168 PRIMARY 23 5 198 IIFAVGGLLALTPLVCILVSYGL 220 PRIMARY 23 6 239 STCSCHLSVVVLFYGTAIAVYFS 261 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520809 312 603232 60.0 97.1 NP_036492 312 603232 60.0 97.1 XP_011520808 322 603232 60.0 97.1 NP_001005191 312 611538 51.1 97.1 NP_002539 312 164342 47.2 97.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0883 Download

>KIEE0883  942 bp
ATGGAAAAAAGAAATCTAACAGTTGTCAGGGAATTCGTCCTTCTGGGACTTCCTAGCTCA
GCAGAGCAGCAGCACCTCCTGTCTGTGCTCTTTCTCTGTATGTATTTAGCCACCACCTTG
GGGAACATGCTCATCATTGCGACGATTGGCTTTGACTCTCACCTCCATTCCCCTATGTAC
TTCTTCCTTAGTAACTTGGCCTTTGTTGACATCTGCTTTACGTCGACTACAGTCCCCCAA
ATGGTAGTGAATATCTTGACTGGCACCAAGACTATCTCTTTTGCAGGCTGCCTCACCCAG
CTCTTCTTCTTCGTTTCTTTTGTGAATATGGACAGCCTCCTTCTGTGTGTGATGGCATAT
GATAGATATGTGGCGATTTGCCACCCCTTACATTACACCGCCAGAATGAACCTGTGCCTT
TGTGTCCAGCTAGTGGCTGGACTGTGGCTTGTTACTTACCTCCACGCCCTCCTGCATACT
GTCCTAATAGCACAGCTGTCCTTCTGTGCCTCCAATATCATCCATCATTTCTTCTGTGAT
CTCAATCCTCTCCTGCAGCTCTCTTGCTCTGACGTCTCCTTCAATGTAATGATCATTTTT
GCAGTAGGAGGTCTATTGGCTCTCACGCCCCTTGTCTGTATCCTCGTATCTTATGGACTT
ATCTTCTCCACTGTTCTGAAGATCACCTCTACTCAGGGCAAGCAGAGAGCTGTTTCCACC
TGCAGCTGCCACCTGTCAGTGGTGGTGTTGTTTTACGGCACAGCCATCGCCGTCTATTTC
AGCCCTTCATCCCCCCATATGCCTGAGAGCGACACTCTGTCAACCATCATGTATTCAATG
GTGGCTCCGATGCTGAATCCTTTCATCTATACCCTAAGGAACAGGGATATGAAGAGGGGA
CTTCAGAAAATGCTTCTCAAGTGCACAGTCTTTCAGCAGCAA

ORF Protein

Cloned ORF protein sequence for pF1KE0883 Download

>KIEE0883  314 aa
MEKRNLTVVREFVLLGLPSSAEQQHLLSVLFLCMYLATTLGNMLIIATIGFDSHLHSPMY
FFLSNLAFVDICFTSTTVPQMVVNILTGTKTISFAGCLTQLFFFVSFVNMDSLLLCVMAY
DRYVAICHPLHYTARMNLCLCVQLVAGLWLVTYLHALLHTVLIAQLSFCASNIIHHFFCD
LNPLLQLSCSDVSFNVMIIFAVGGLLALTPLVCILVSYGLIFSTVLKITSTQGKQRAVST
CSCHLSVVVLFYGTAIAVYFSPSSPHMPESDTLSTIMYSMVAPMLNPFIYTLRNRDMKRG
LQKMLLKCTVFQQQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0883 Download

>pF1KE0883  4055 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAAAAAAGA
AATCTAACAGTTGTCAGGGAATTCGTCCTTCTGGGACTTCCTAGCTCAGCAGAGCAGCAG
CACCTCCTGTCTGTGCTCTTTCTCTGTATGTATTTAGCCACCACCTTGGGGAACATGCTC
ATCATTGCGACGATTGGCTTTGACTCTCACCTCCATTCCCCTATGTACTTCTTCCTTAGT
AACTTGGCCTTTGTTGACATCTGCTTTACGTCGACTACAGTCCCCCAAATGGTAGTGAAT
ATCTTGACTGGCACCAAGACTATCTCTTTTGCAGGCTGCCTCACCCAGCTCTTCTTCTTC
GTTTCTTTTGTGAATATGGACAGCCTCCTTCTGTGTGTGATGGCATATGATAGATATGTG
GCGATTTGCCACCCCTTACATTACACCGCCAGAATGAACCTGTGCCTTTGTGTCCAGCTA
GTGGCTGGACTGTGGCTTGTTACTTACCTCCACGCCCTCCTGCATACTGTCCTAATAGCA
CAGCTGTCCTTCTGTGCCTCCAATATCATCCATCATTTCTTCTGTGATCTCAATCCTCTC
CTGCAGCTCTCTTGCTCTGACGTCTCCTTCAATGTAATGATCATTTTTGCAGTAGGAGGT
CTATTGGCTCTCACGCCCCTTGTCTGTATCCTCGTATCTTATGGACTTATCTTCTCCACT
GTTCTGAAGATCACCTCTACTCAGGGCAAGCAGAGAGCTGTTTCCACCTGCAGCTGCCAC
CTGTCAGTGGTGGTGTTGTTTTACGGCACAGCCATCGCCGTCTATTTCAGCCCTTCATCC
CCCCATATGCCTGAGAGCGACACTCTGTCAACCATCATGTATTCAATGGTGGCTCCGATG
CTGAATCCTTTCATCTATACCCTAAGGAACAGGGATATGAAGAGGGGACTTCAGAAAATG
CTTCTCAAGTGCACAGTCTTTCAGCAGCAAGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT