SHF ORF clone FXC11385

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Flexi ORF Clone FXC11385

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Clone info.

Species

human

Clone Name

pF1KE0736 Sequence (with vector) Restriction Map

Product ID

FXC11385

HaloTag Clone PID

FHC11385

ORF Sequence

DNA sequence (1269 bp)
Protein sequence (423 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528975]

Gene

KIEE0736

Symbol

SHF

Description

Src homology 2 domain containing F, transcript variant 2

Original Clone ID

cs02236

Features of the cloned ORF sequence

Description

Length: 1269 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 423 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10120.2 5.8e-100 99.8 SHF CCDS73721.1 8e-34 83.2 SHF CCDS76750.1 2.9e-24 64.9 SHF CCDS76749.1 7e-24 72.0 SHF CCDS43806.1 3.4e-20 44.1 SHB The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000980 323 337 PR00401 SH2 motif IPR000980 342 352 PR00401 SH2 motif IPR000980 354 365 PR00401 SH2 motif IPR000980 388 402 PR00401 SH2 motif HMMPfam IPR000980 323 399 PF00017 SH2 motif HMMSmart IPR000980 321 405 SM00252 SH2 motif ProfileScan IPR000980 323 418 PS50001 SH2 motif
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003019 509 600314 44.1 95.0 NP_001010846 495 610482 40.3 87.2 XP_011507465 495 610482 40.3 87.2 NP_064594 340 610481 40.9 84.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0736 Download

>KIEE0736  1269 bp
ATGCAGCAGGAGGGAGGACCCGTGAGGAGCGCCCCCTGTAGGACCGGAACCCTGGAGGGT
TCGCGGCAAGGGTCTCCGGGGCATAGGAAACGGGCATCCCCCAAGGGTAGTCTGAGTTCC
GCCCAGCCCCATTCCTGGATGCTCACGCCGTCTCCCCTAAACTCCCACTGCGCTCACCGG
GAGCCCATCTCATCATCACCACAGCCCGTGGCTAATGGGCCAAAACAGAAGAAGAAAAGC
AACTGGCGGAGTACAACGCGCCTGCGCATTATCAGACTCAGGGACAGGCTGGAACCTCGC
CCCCTAGCTATCCTAGAAGACTATGCGGACCCGTTTGATGTTCAGGAGACTGGCGAAGGC
TCAGCAGGAGCTTCAGGAGCCCCAGAGAAGGTCCCTGAAAATGATGGCTACATGGAGCCC
TATGAGGCTCAAAAGATGATGGCCGAGATCCGGGGCTCCAAGGAGACAGCAACTCAGCCC
TTGCCTCTGTATGACACACCCTATGAGCCAGAGGAGGATGGGGCCACCCCGGAAGGTGAG
GGGGCCCCCTGGCCCCGGGAGTCCCGCCTGCCAGAGGATGATGAGAGGCCCCCTGAGGAG
TATGACCAGCCCTGGGAGTGGAAGAAGGAGCGGATTTCCAAAGCCTTTGCAGTTGACATT
AAGGTCATCAAAGACCTACCTTGGCCTCCACCTGTGGGACAGCTGGACAGCAGCCCCTCC
CTGCCTGATGGGGACAGGGACATCTCCGGTCCAGCCTCGCCCCTCCCTGAGCCCAGCCTG
GAGGACAGCAGCGCCCAGTTTGAAGGACCGGAGAAGAGCTGCCTGTCACCTGGCCGGGAG
GAGAAGGGGCGGCTACCTCCCCGACTCTCTGCAGGGAACCCCAAGTCAGCCAAACCCCTA
AGCATGGAGCCCAGCAGCCCCCTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAAC
CAGGTCTGGTATCACGGGGCCATCAGCCGAACCGACGCCGAGAACCTGCTCCGGCTGTGC
AAAGAGGCCAGCTACCTGGTGCGCAACAGTGAGACCAGCAAGAATGACTTCTCCCTCTCC
CTCAAGAGCAGCCAGGGATTCATGCACATGAAGCTGTCCCGAACCAAGGAACACAAATAT
GTGCTGGGCCAGAACAGCCCGCCCTTCAGCAGCGTCCCTGAAATTGTGCACCACTATGCC
AGCCGCAAGCTACCCATTAAGGGAGCCGAACACATGTCCCTGCTCTACCCTGTGGCCATC
CGGACTCTT

ORF Protein

Cloned ORF protein sequence for pF1KE0736 Download

>KIEE0736  423 aa
MQQEGGPVRSAPCRTGTLEGSRQGSPGHRKRASPKGSLSSAQPHSWMLTPSPLNSHCAHR
EPISSSPQPVANGPKQKKKSNWRSTTRLRIIRLRDRLEPRPLAILEDYADPFDVQETGEG
SAGASGAPEKVPENDGYMEPYEAQKMMAEIRGSKETATQPLPLYDTPYEPEEDGATPEGE
GAPWPRESRLPEDDERPPEEYDQPWEWKKERISKAFAVDIKVIKDLPWPPPVGQLDSSPS
LPDGDRDISGPASPLPEPSLEDSSAQFEGPEKSCLSPGREEKGRLPPRLSAGNPKSAKPL
SMEPSSPLGEWTDPALPLENQVWYHGAISRTDAENLLRLCKEASYLVRNSETSKNDFSLS
LKSSQGFMHMKLSRTKEHKYVLGQNSPPFSSVPEIVHHYASRKLPIKGAEHMSLLYPVAI
RTL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0736 Download

>pF1KE0736  4382 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCAGCAGGAG
GGAGGACCCGTGAGGAGCGCCCCCTGTAGGACCGGAACCCTGGAGGGTTCGCGGCAAGGG
TCTCCGGGGCATAGGAAACGGGCATCCCCCAAGGGTAGTCTGAGTTCCGCCCAGCCCCAT
TCCTGGATGCTCACGCCGTCTCCCCTAAACTCCCACTGCGCTCACCGGGAGCCCATCTCA
TCATCACCACAGCCCGTGGCTAATGGGCCAAAACAGAAGAAGAAAAGCAACTGGCGGAGT
ACAACGCGCCTGCGCATTATCAGACTCAGGGACAGGCTGGAACCTCGCCCCCTAGCTATC
CTAGAAGACTATGCGGACCCGTTTGATGTTCAGGAGACTGGCGAAGGCTCAGCAGGAGCT
TCAGGAGCCCCAGAGAAGGTCCCTGAAAATGATGGCTACATGGAGCCCTATGAGGCTCAA
AAGATGATGGCCGAGATCCGGGGCTCCAAGGAGACAGCAACTCAGCCCTTGCCTCTGTAT
GACACACCCTATGAGCCAGAGGAGGATGGGGCCACCCCGGAAGGTGAGGGGGCCCCCTGG
CCCCGGGAGTCCCGCCTGCCAGAGGATGATGAGAGGCCCCCTGAGGAGTATGACCAGCCC
TGGGAGTGGAAGAAGGAGCGGATTTCCAAAGCCTTTGCAGTTGACATTAAGGTCATCAAA
GACCTACCTTGGCCTCCACCTGTGGGACAGCTGGACAGCAGCCCCTCCCTGCCTGATGGG
GACAGGGACATCTCCGGTCCAGCCTCGCCCCTCCCTGAGCCCAGCCTGGAGGACAGCAGC
GCCCAGTTTGAAGGACCGGAGAAGAGCTGCCTGTCACCTGGCCGGGAGGAGAAGGGGCGG
CTACCTCCCCGACTCTCTGCAGGGAACCCCAAGTCAGCCAAACCCCTAAGCATGGAGCCC
AGCAGCCCCCTGGGGGAGTGGACAGATCCAGCACTGCCTCTGGAAAACCAGGTCTGGTAT
CACGGGGCCATCAGCCGAACCGACGCCGAGAACCTGCTCCGGCTGTGCAAAGAGGCCAGC
TACCTGGTGCGCAACAGTGAGACCAGCAAGAATGACTTCTCCCTCTCCCTCAAGAGCAGC
CAGGGATTCATGCACATGAAGCTGTCCCGAACCAAGGAACACAAATATGTGCTGGGCCAG
AACAGCCCGCCCTTCAGCAGCGTCCCTGAAATTGTGCACCACTATGCCAGCCGCAAGCTA
CCCATTAAGGGAGCCGAACACATGTCCCTGCTCTACCCTGTGGCCATCCGGACTCTTGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAG
CGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGG
GGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAA
GGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCG
ACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCC
TGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGC
CTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTC
GGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCG
CTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCC
ACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGA
GTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGC
TCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAAC
CACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGG
ATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTC
ACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATA
GTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAA
AATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGG
TATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGC
CATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTA
AGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTA
CTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAA
ATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGT
CCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGG
GTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGA
AAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAA
ATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAC
GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTT
TTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTC
AT