PKNOX1 ORF clone pF1KB4325

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone pF1KB4325

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Clone info.

Species

human

Clone Name

pF1KB4325 Sequence (with vector) Restriction Map

Product ID

FXC01386

HaloTag Clone PID

FHC01386

ORF Sequence

DNA sequence (1308 bp)
Protein sequence (436 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384928]

Gene

KIBB4325

Symbol

PKNOX1

Alias : PREP1, pkonx1c

Description

PBX/knotted 1 homeobox 1, transcript variant 1

Original Clone ID

fh18523

Features of the cloned ORF sequence

Description

Length: 1308 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 436 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13692.1 6.7e-149 100.0 PKNOX1 CCDS68211.1 4.7e-106 100.0 PKNOX1 CCDS41730.1 4.1e-37 58.1 PKNOX2 CCDS42014.1 7.4e-19 41.7 MEIS2 CCDS45218.1 7.6e-19 41.7 MEIS2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 278 316 PF00046 Homeobox HMMSmart IPR001356 259 324 SM00389 Homeobox ProfileScan IPR001356 257 320 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_004562 436 602100 100.0 100.0 NP_001307623 435 602100 99.8 100.0 XP_016873599 472 613066 58.1 100.0 XP_011541247 472 613066 58.1 100.0 NP_071345 472 613066 58.1 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB4325 Download

>KIBB4325  1308 bp
ATGATGGCTACACAGACATTAAGTATAGACAGCTATCAAGATGGGCAACAGATGCAAGTA
GTAACAGAGTTAAAGACAGAACAAGATCCAAACTGCTCTGAACCCGATGCAGAAGGAGTG
AGCCCTCCCCCTGTGGAGTCTCAGACCCCGATGGATGTGGACAAGCAGGCCATTTATAGG
CATCCACTATTTCCATTATTAGCTTTGTTGTTTGAAAAATGTGAACAATCTACACAGGGC
TCTGAAGGCACAACTTCTGCCAGTTTTGATGTAGACATCGAAAATTTTGTAAGAAAGCAA
GAGAAGGAAGGGAAACCTTTCTTTTGTGAAGATCCAGAAACTGATAATTTAATGGTAAAA
GCAATCCAGGTTTTGCGCATTCATCTTCTTGAGCTGGAAAAGGTTAACGAACTCTGCAAA
GATTTCTGCAGTCGATACATTGCTTGTCTGAAAACAAAAATGAACAGTGAAACTCTGTTG
AGTGGAGAGCCTGGAAGCCCGTACTCACCAGTGCAGTCCCAGCAGATTCAAAGTGCCATC
ACAGGCACCATCAGCCCTCAGGGAATTGTGGTGCCGGCGTCCGCGCTGCAGCAGGGAAAC
GTAGCCATGGCGACGGTGGCAGGTGGCACAGTGTATCAGCCTGTCACGGTCGTCACTCCC
CAAGGCCAAGTGGTCACACAGACATTGTCGCCTGGGACAATTAGGATCCAGAACTCCCAG
CTTCAGTTACAGTTAAACCAAGATCTCAGCATCTTGCATCAAGATGATGGTTCATCTAAG
AACAAGAGGGGCGTCCTGCCAAAGCATGCCACGAACGTGATGCGGTCCTGGCTCTTCCAG
CACATCGGGCATCCCTACCCAACAGAGGATGAGAAAAAACAGATTGCTGCTCAGACAAAT
TTGACACTACTCCAAGTCAACAACTGGTTCATCAATGCCAGAAGACGAATTCTTCAGCCA
ATGTTGGATTCAAGTTGTTCAGAGACCCCCAAAACAAAGAAAAAAACTGCTCAGAACCGG
CCAGTTCAGAGGTTTTGGCCTGATTCTATTGCATCAGGAGTCGCACAGCCACCGCCGAGC
GAGCTCACCATGTCGGAAGGAGCTGTTGTCACCATCACCACGCCCGTGAACATGAACGTG
GACAGCCTTCAGTCTCTGTCCTCGGACGGGGCCACCCTGGCGGTGCAGCAGGTCATGATG
GCAGGGCAGAGCGAGGACGAGTCTGTGGACAGCACAGAGGAGGATGCGGGTGCCCTGGCC
CCTGCCCACATCAGCGGGCTGGTCTTGGAGAACAGTGACTCCCTGCAG

ORF Protein

Cloned ORF protein sequence for pF1KB4325 Download

>KIBB4325  436 aa
MMATQTLSIDSYQDGQQMQVVTELKTEQDPNCSEPDAEGVSPPPVESQTPMDVDKQAIYR
HPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEKEGKPFFCEDPETDNLMVK
AIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAI
TGTISPQGIVVPASALQQGNVAMATVAGGTVYQPVTVVTPQGQVVTQTLSPGTIRIQNSQ
LQLQLNQDLSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTN
LTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWPDSIASGVAQPPPS
ELTMSEGAVVTITTPVNMNVDSLQSLSSDGATLAVQQVMMAGQSEDESVDSTEEDAGALA
PAHISGLVLENSDSLQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB4325 Download

>pF1KB4325  4421 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGGCTACA
CAGACATTAAGTATAGACAGCTATCAAGATGGGCAACAGATGCAAGTAGTAACAGAGTTA
AAGACAGAACAAGATCCAAACTGCTCTGAACCCGATGCAGAAGGAGTGAGCCCTCCCCCT
GTGGAGTCTCAGACCCCGATGGATGTGGACAAGCAGGCCATTTATAGGCATCCACTATTT
CCATTATTAGCTTTGTTGTTTGAAAAATGTGAACAATCTACACAGGGCTCTGAAGGCACA
ACTTCTGCCAGTTTTGATGTAGACATCGAAAATTTTGTAAGAAAGCAAGAGAAGGAAGGG
AAACCTTTCTTTTGTGAAGATCCAGAAACTGATAATTTAATGGTAAAAGCAATCCAGGTT
TTGCGCATTCATCTTCTTGAGCTGGAAAAGGTTAACGAACTCTGCAAAGATTTCTGCAGT
CGATACATTGCTTGTCTGAAAACAAAAATGAACAGTGAAACTCTGTTGAGTGGAGAGCCT
GGAAGCCCGTACTCACCAGTGCAGTCCCAGCAGATTCAAAGTGCCATCACAGGCACCATC
AGCCCTCAGGGAATTGTGGTGCCGGCGTCCGCGCTGCAGCAGGGAAACGTAGCCATGGCG
ACGGTGGCAGGTGGCACAGTGTATCAGCCTGTCACGGTCGTCACTCCCCAAGGCCAAGTG
GTCACACAGACATTGTCGCCTGGGACAATTAGGATCCAGAACTCCCAGCTTCAGTTACAG
TTAAACCAAGATCTCAGCATCTTGCATCAAGATGATGGTTCATCTAAGAACAAGAGGGGC
GTCCTGCCAAAGCATGCCACGAACGTGATGCGGTCCTGGCTCTTCCAGCACATCGGGCAT
CCCTACCCAACAGAGGATGAGAAAAAACAGATTGCTGCTCAGACAAATTTGACACTACTC
CAAGTCAACAACTGGTTCATCAATGCCAGAAGACGAATTCTTCAGCCAATGTTGGATTCA
AGTTGTTCAGAGACCCCCAAAACAAAGAAAAAAACTGCTCAGAACCGGCCAGTTCAGAGG
TTTTGGCCTGATTCTATTGCATCAGGAGTCGCACAGCCACCGCCGAGCGAGCTCACCATG
TCGGAAGGAGCTGTTGTCACCATCACCACGCCCGTGAACATGAACGTGGACAGCCTTCAG
TCTCTGTCCTCGGACGGGGCCACCCTGGCGGTGCAGCAGGTCATGATGGCAGGGCAGAGC
GAGGACGAGTCTGTGGACAGCACAGAGGAGGATGCGGGTGCCCTGGCCCCTGCCCACATC
AGCGGGCTGGTCTTGGAGAACAGTGACTCCCTGCAGGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAA
AAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTT
TTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTT
TTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTG
TTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCA
GATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGT
AGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGA
TAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTC
GGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACT
GAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGA
CAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGG
AAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATT
TTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTT
ACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGA
TTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT