EDEM3 ORF clone pF1KB5599

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Flexi ORF Clone pF1KB5599

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Clone info.

Species

human

Clone Name

pF1KB5599 Sequence (with vector) Restriction Map

Product ID

FXC01540

HaloTag Clone PID

FHC01540

ORF Sequence

DNA sequence (2796 bp)
Protein sequence (932 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385131]

Gene

KIBB5599

Symbol

EDEM3

Alias : C1orf22, CDG2V

Description

ER degradation enhancer, mannosidase alpha-like 3

Original Clone ID

eg01041

Features of the cloned ORF sequence

Description

Length: 2796 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 932 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1363.2 0 100.0 EDEM3 CCDS13247.1 2.6e-50 39.3 EDEM2 CCDS46592.1 1.2e-49 40.5 EDEM2 CCDS33686.1 1.9e-41 44.8 EDEM1 CCDS5122.1 3.2e-14 32.8 MAN1A1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001382 59 79 PR00747 Glycoside hydrolase IPR001382 104 118 PR00747 Glycoside hydrolase IPR001382 141 159 PR00747 Glycoside hydrolase IPR001382 192 211 PR00747 Glycoside hydrolase IPR001382 289 306 PR00747 Glycoside hydrolase IPR001382 347 363 PR00747 Glycoside hydrolase IPR001382 401 425 PR00747 Glycoside hydrolase IPR001382 460 480 PR00747 Glycoside hydrolase HMMPfam IPR001382 59 497 PF01532 Glycoside hydrolase IPR003137 677 778 PF02225 Protease-associated domain
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 20 RLVAATAAFCLVSATSVWTAGAE 42 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_079467 932 610214 100.0 100.0 XP_005245556 933 610214 99.9 100.0 XP_016857886 855 610214 100.0 91.7 XP_011508314 856 610214 99.9 91.7 NP_001306889 948 610214 98.2 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB5599 Download

>KIBB5599  2796 bp
ATGAGCGAAGCCGGCGGCCGGGGCTGTGGGTCCCCGGTTCCCCAGCGAGCGCGATGGAGA
CTAGTGGCGGCGACGGCCGCGTTCTGCCTGGTGTCGGCCACCTCCGTGTGGACGGCGGGG
GCCGAGCCCATGAGTAGGGAGGAGAAACAGAAGCTTGGGAATCAAGTACTGGAAATGTTT
GATCATGCTTATGGTAACTATATGGAACATGCTTACCCTGCTGATGAACTCATGCCTTTA
ACCTGTAGAGGTCGAGTTAGAGGCCAAGAGCCAAGTCGCGGTGACGTTGATGATGCCTTG
GGAAAATTTTCTCTGACACTGATTGATTCTTTGGACACTCTTGTGGTTTTAAATAAAACT
AAAGAATTTGAAGATGCAGTGAGAAAAGTTTTAAGAGATGTTAATTTAGATAACGATGTA
GTCGTATCAGTCTTTGAAACAAACATCAGAGTTCTTGGGGGTCTTTTGGGTGGGCACTCC
CTGGCAATCATGCTGAAAGAAAAAGGTGAATATATGCAGTGGTACAATGATGAACTTCTC
CAAATGGCAAAGCAGTTAGGTTACAAACTTTTACCGGCTTTCAACACTACCAGTGGCCTT
CCTTATCCAAGAATTAATTTAAAGTTTGGCATCAGAAAACCAGAAGCTCGGACAGGAACT
GAGACAGATACCTGTACAGCTTGTGCAGGTACCTTGATCCTTGAATTTGCTGCTTTAAGT
CGATTCACAGGAGCAACAATATTTGAGGAATATGCCAGAAAAGCTCTTGATTTTCTCTGG
GAAAAAAGACAGCGAAGTAGTAATTTAGTGGGCGTGACTATAAATATTCATACTGGAGAT
TGGGTACGAAAAGATAGTGGAGTTGGAGCAGGGATTGATTCATATTATGAATATCTGTTG
AAAGCCTATGTCTTGCTTGGAGATGACAGTTTTCTGGAAAGATTTAACACACACTATGAT
GCCATAATGAGGTATATTAGCCAGCCACCTCTTCTACTTGATGTGCATATCCACAAACCA
ATGCTGAATGCTCGGACTTGGATGGATGCTTTGCTTGCCTTCTTCCCAGGCTTGCAGGTG
TTAAAGGGGGATATTAGACCTGCTATTGAAACTCATGAAATGTTATATCAGGTGATTAAA
AAACACAATTTTCTACCAGAGGCATTTACCACAGATTTCAGAGTACACTGGGCTCAACAT
CCTTTAAGGCCAGAATTTGCAGAAAGTACCTACTTCTTATATAAAGCTACAGGAGATCCT
TACTACCTTGAAGTAGGGAAGACACTTATTGAAAATTTAAATAAATATGCTAGAGTGCCT
TGCGGATTTGCTGCCATGAAGGATGTTCGTACTGGAAGTCATGAGGACAGAATGGATTCT
TTCTTCTTGGCTGAAATGTTTAAATATCTTTACCTGTTATTTGCTGATAAAGAAGACATT
ATTTTTGACATAGAAGATTACATCTTTACAACAGAAGCTCATCTGTTACCTCTTTGGCTC
TCTACTACAAATCAAAGCATCTCTAAAAAGAACACAACCTCGGAATATACAGAACTGGAT
GACAGTAACTTCGATTGGACTTGTCCAAATACTCAGATCCTCTTTCCTAATGACCCATTG
TATGCTCAAAGTATTCGTGAGCCCTTGAAAAATGTGGTGGATAAGAGCTGTCCTAGAGGC
ATCATCAGAGTAGAGGAGAGTTTCAGGAGTGGAGCTAAACCCCCTCTGAGAGCCAGAGAT
TTCATGGCCACTAACCCTGAGCATTTAGAAATCCTGAAGAAGATGGGGGTGAGTTTGATT
CACCTCAAAGATGGGAGAGTCCAGTTGGTCCAACATGCAATCCAAGCTGCTAGTTCAATC
GACGCTGAAGATGGGTTGAGGTTCATGCAGGAGATGATTGAATTGTCAAGTCAGCAACAA
AAAGAACAGCAGCTGCCTCCACGAGCTGTACAAATTGTTTCCCACCCATTTTTTGGCAGG
GTAGTATTGACTGCTGGACCAGCTCAGTTTGGGCTGGATCTGTCTAAACATAAAGAGACA
AGAGGATTTGTTGCAAGCAGTAAACCATCCAATGGTTGTTCAGAGCTTACTAACCCAGAG
GCAGTGATGGGAAAAATCGCACTGATACAAAGAGGACAGTGCATGTTTGCAGAAAAGGCA
CGCAACATCCAGAATGCTGGAGCCATTGGTGGCATTGTTATTGATGACAATGAGGGGAGC
AGCAGTGATACTGCCCCTCTGTTCCAGATGGCAGGTGATGGAAAGGATACAGATGACATC
AAGATCCCCATGCTGTTCTTATTCAGCAAAGAAGGAAGTATCATACTGGATGCCATCCGG
GAATATGAGGAGGTAGAAGTGCTCCTCTCTGATAAAGCAAAAGATCGAGATCCTGAAATG
GAAAATGAAGAACAACCATCCTCTGAAAATGATTCTCAGAATCAGAGTGGTGAACAGATT
TCATCAAGTTCTCAGGAGGTTGATTTGGTTGATCAAGAGTCTTCTGAGGAAAATTCTCTA
AATTCTCACCCAGAATCATTATCTCTAGCAGATATGGACAATGCTGCAAGCATTTCCCCT
TCTGAACAGACTTCTAATCCCACAGAAAACCATGAGACTACAAATCTTAATGGTGAATGT
ACAGATTTAGATAACCAGCTTCAAGAACAATCAGAAACTGAGGAAGATTCCAATCCTAAT
GTTAGCTGGGGTAAAAAGGTCCAGCCTATAGACTCCATATTAGCAGACTGGAATGAAGAT
ATAGAAGCATTTGAAATGATGGAGAAGGATGAGCTA

ORF Protein

Cloned ORF protein sequence for pF1KB5599 Download

>KIBB5599  932 aa
MSEAGGRGCGSPVPQRARWRLVAATAAFCLVSATSVWTAGAEPMSREEKQKLGNQVLEMF
DHAYGNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSLTLIDSLDTLVVLNKT
KEFEDAVRKVLRDVNLDNDVVVSVFETNIRVLGGLLGGHSLAIMLKEKGEYMQWYNDELL
QMAKQLGYKLLPAFNTTSGLPYPRINLKFGIRKPEARTGTETDTCTACAGTLILEFAALS
RFTGATIFEEYARKALDFLWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYLL
KAYVLLGDDSFLERFNTHYDAIMRYISQPPLLLDVHIHKPMLNARTWMDALLAFFPGLQV
LKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQHPLRPEFAESTYFLYKATGDP
YYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKEDI
IFDIEDYIFTTEAHLLPLWLSTTNQSISKKNTTSEYTELDDSNFDWTCPNTQILFPNDPL
YAQSIREPLKNVVDKSCPRGIIRVEESFRSGAKPPLRARDFMATNPEHLEILKKMGVSLI
HLKDGRVQLVQHAIQAASSIDAEDGLRFMQEMIELSSQQQKEQQLPPRAVQIVSHPFFGR
VVLTAGPAQFGLDLSKHKETRGFVASSKPSNGCSELTNPEAVMGKIALIQRGQCMFAEKA
RNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIR
EYEEVEVLLSDKAKDRDPEMENEEQPSSENDSQNQSGEQISSSSQEVDLVDQESSEENSL
NSHPESLSLADMDNAASISPSEQTSNPTENHETTNLNGECTDLDNQLQEQSETEEDSNPN
VSWGKKVQPIDSILADWNEDIEAFEMMEKDEL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB5599 Download

>pF1KB5599  5909 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGCGAAGCC
GGCGGCCGGGGCTGTGGGTCCCCGGTTCCCCAGCGAGCGCGATGGAGACTAGTGGCGGCG
ACGGCCGCGTTCTGCCTGGTGTCGGCCACCTCCGTGTGGACGGCGGGGGCCGAGCCCATG
AGTAGGGAGGAGAAACAGAAGCTTGGGAATCAAGTACTGGAAATGTTTGATCATGCTTAT
GGTAACTATATGGAACATGCTTACCCTGCTGATGAACTCATGCCTTTAACCTGTAGAGGT
CGAGTTAGAGGCCAAGAGCCAAGTCGCGGTGACGTTGATGATGCCTTGGGAAAATTTTCT
CTGACACTGATTGATTCTTTGGACACTCTTGTGGTTTTAAATAAAACTAAAGAATTTGAA
GATGCAGTGAGAAAAGTTTTAAGAGATGTTAATTTAGATAACGATGTAGTCGTATCAGTC
TTTGAAACAAACATCAGAGTTCTTGGGGGTCTTTTGGGTGGGCACTCCCTGGCAATCATG
CTGAAAGAAAAAGGTGAATATATGCAGTGGTACAATGATGAACTTCTCCAAATGGCAAAG
CAGTTAGGTTACAAACTTTTACCGGCTTTCAACACTACCAGTGGCCTTCCTTATCCAAGA
ATTAATTTAAAGTTTGGCATCAGAAAACCAGAAGCTCGGACAGGAACTGAGACAGATACC
TGTACAGCTTGTGCAGGTACCTTGATCCTTGAATTTGCTGCTTTAAGTCGATTCACAGGA
GCAACAATATTTGAGGAATATGCCAGAAAAGCTCTTGATTTTCTCTGGGAAAAAAGACAG
CGAAGTAGTAATTTAGTGGGCGTGACTATAAATATTCATACTGGAGATTGGGTACGAAAA
GATAGTGGAGTTGGAGCAGGGATTGATTCATATTATGAATATCTGTTGAAAGCCTATGTC
TTGCTTGGAGATGACAGTTTTCTGGAAAGATTTAACACACACTATGATGCCATAATGAGG
TATATTAGCCAGCCACCTCTTCTACTTGATGTGCATATCCACAAACCAATGCTGAATGCT
CGGACTTGGATGGATGCTTTGCTTGCCTTCTTCCCAGGCTTGCAGGTGTTAAAGGGGGAT
ATTAGACCTGCTATTGAAACTCATGAAATGTTATATCAGGTGATTAAAAAACACAATTTT
CTACCAGAGGCATTTACCACAGATTTCAGAGTACACTGGGCTCAACATCCTTTAAGGCCA
GAATTTGCAGAAAGTACCTACTTCTTATATAAAGCTACAGGAGATCCTTACTACCTTGAA
GTAGGGAAGACACTTATTGAAAATTTAAATAAATATGCTAGAGTGCCTTGCGGATTTGCT
GCCATGAAGGATGTTCGTACTGGAAGTCATGAGGACAGAATGGATTCTTTCTTCTTGGCT
GAAATGTTTAAATATCTTTACCTGTTATTTGCTGATAAAGAAGACATTATTTTTGACATA
GAAGATTACATCTTTACAACAGAAGCTCATCTGTTACCTCTTTGGCTCTCTACTACAAAT
CAAAGCATCTCTAAAAAGAACACAACCTCGGAATATACAGAACTGGATGACAGTAACTTC
GATTGGACTTGTCCAAATACTCAGATCCTCTTTCCTAATGACCCATTGTATGCTCAAAGT
ATTCGTGAGCCCTTGAAAAATGTGGTGGATAAGAGCTGTCCTAGAGGCATCATCAGAGTA
GAGGAGAGTTTCAGGAGTGGAGCTAAACCCCCTCTGAGAGCCAGAGATTTCATGGCCACT
AACCCTGAGCATTTAGAAATCCTGAAGAAGATGGGGGTGAGTTTGATTCACCTCAAAGAT
GGGAGAGTCCAGTTGGTCCAACATGCAATCCAAGCTGCTAGTTCAATCGACGCTGAAGAT
GGGTTGAGGTTCATGCAGGAGATGATTGAATTGTCAAGTCAGCAACAAAAAGAACAGCAG
CTGCCTCCACGAGCTGTACAAATTGTTTCCCACCCATTTTTTGGCAGGGTAGTATTGACT
GCTGGACCAGCTCAGTTTGGGCTGGATCTGTCTAAACATAAAGAGACAAGAGGATTTGTT
GCAAGCAGTAAACCATCCAATGGTTGTTCAGAGCTTACTAACCCAGAGGCAGTGATGGGA
AAAATCGCACTGATACAAAGAGGACAGTGCATGTTTGCAGAAAAGGCACGCAACATCCAG
AATGCTGGAGCCATTGGTGGCATTGTTATTGATGACAATGAGGGGAGCAGCAGTGATACT
GCCCCTCTGTTCCAGATGGCAGGTGATGGAAAGGATACAGATGACATCAAGATCCCCATG
CTGTTCTTATTCAGCAAAGAAGGAAGTATCATACTGGATGCCATCCGGGAATATGAGGAG
GTAGAAGTGCTCCTCTCTGATAAAGCAAAAGATCGAGATCCTGAAATGGAAAATGAAGAA
CAACCATCCTCTGAAAATGATTCTCAGAATCAGAGTGGTGAACAGATTTCATCAAGTTCT
CAGGAGGTTGATTTGGTTGATCAAGAGTCTTCTGAGGAAAATTCTCTAAATTCTCACCCA
GAATCATTATCTCTAGCAGATATGGACAATGCTGCAAGCATTTCCCCTTCTGAACAGACT
TCTAATCCCACAGAAAACCATGAGACTACAAATCTTAATGGTGAATGTACAGATTTAGAT
AACCAGCTTCAAGAACAATCAGAAACTGAGGAAGATTCCAATCCTAATGTTAGCTGGGGT
AAAAAGGTCCAGCCTATAGACTCCATATTAGCAGACTGGAATGAAGATATAGAAGCATTT
GAAATGATGGAGAAGGATGAGCTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCT
CTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGC
TGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACG
GGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAA
AACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGC
GCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCG
TTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTG
CTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGG
AAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGA
TCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTG
CACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAG
ACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTT
TTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTA
TCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCG
GGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTT
GCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGAT
CCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGG
ATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCA
GCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACT
CATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATC
GACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGAT
ATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCC
GCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGA
CTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGT
GAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTG
AGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGT
AATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCA
AGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATAC
TGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTAC
ATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCT
TACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGG
GGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACA
GCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGT
AAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTA
TCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTC
GTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGC
CTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAA
CCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCC
CTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAAT
GTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATT
GCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTG
AACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCC
TCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCG
AGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAA
TTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAA
ACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGC
ATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGT
CGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGC
AACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGC
AGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCAT