ZNF542P ORF clone pF1KB9609

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Flexi ORF Clone pF1KB9609

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Clone info.

Species

human

Clone Name

pF1KB9609 Sequence (with vector) Restriction Map

Product ID

FXC03194

HaloTag Clone PID

FHC03194

Original Clone PID

ORK03194

ORF Sequence

DNA sequence (723 bp)
Protein sequence (241 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464766]

Gene

KIBB9609

Symbol

ZNF542P

Alias : ZNF542

Description

zinc finger protein 542, pseudogene

Original Clone ID

cp00192

Features of the cloned ORF sequence

Description

Length: 723 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 241 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS75904.1 7.8e-35 60.6 ZNF79 CCDS69664.1 9.1e-35 60.6 ZNF79 CCDS6871.1 9.4e-35 60.6 ZNF79 CCDS12491.1 2.5e-34 61.2 ZNF565 CCDS12501.1 4.7e-34 61.3 ZNF383 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 17 39 PF00096 Zinc finger IPR007087 45 67 PF00096 Zinc finger IPR007087 73 95 PF00096 Zinc finger IPR007087 129 151 PF00096 Zinc finger IPR007087 157 179 PF00096 Zinc finger HMMSmart IPR015880 17 39 SM00355 Zinc finger IPR015880 45 67 SM00355 Zinc finger IPR015880 73 95 SM00355 Zinc finger IPR015880 101 123 SM00355 Zinc finger IPR015880 129 151 SM00355 Zinc finger IPR015880 157 179 SM00355 Zinc finger IPR015880 185 207 SM00355 Zinc finger IPR015880 213 233 SM00355 Zinc finger ProfileScan IPR007087 17 44 PS50157 Zinc finger IPR007087 45 72 PS50157 Zinc finger IPR007087 73 100 PS50157 Zinc finger IPR007087 101 128 PS50157 Zinc finger IPR007087 129 156 PS50157 Zinc finger IPR007087 157 184 PS50157 Zinc finger IPR007087 185 212 PS50157 Zinc finger IPR007087 213 240 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001273627 364 194552 60.6 97.9 NP_001273625 474 194552 60.6 97.9 XP_006717342 474 194552 60.6 97.9 NP_001273626 474 194552 60.6 97.9 NP_001309189 474 194552 60.6 97.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9609 Download

>KIBB9609  723 bp
ATGACTCATCTCACACAGCATCAGACTACACATACGAGAGAAAAGTTCCATGAATGCAGT
GAATGTGGAAAGGCCTTCAGCCGTGTCTCAGCTCTTATAGATCACCAGCGAATTCATAGT
GGAGAAAAGCCGTATGAATGTAAGGAGTGTGGAAGAGCCTTCACTCAAAGTGCCCAGCTC
ATTAGACATCAGAAAACTCATTCTGGAGAAAAACCCTATGAGTGTAGTAAGTGTAAGAAA
TCTTTTGTGCACCTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGGAGAAAAACCA
TATCAATGTAAGGACTGCAAAAAGACCTTTTGTCGTGTGATGCAGTTCACTCTGCACAGG
AGAATTCATACTGGTGAAAAACCCTATGAATGCAAGGAATGTGGAAAGTCCTTCAGCGCC
CATTCTTCTCTTGTTACTCATAAGAGAACACACAGTGGAGAAAAACCGTATAAATGCAAG
GAATGTGGAAAAGCCTTCAGTGCGCACTCTTCCCTTGTTACTCATAAGAGAACACACAGT
GGAGAGAAACCCTATACATGCCATGCCTGTGGGAAGGCCTTTAATACTTCCTCCACACTT
TGTCAACATAATAGAATTCATACTGGTGAAAAACCCTTTCAGTGCAGTCAATGCGGGAAG
TCCTTTAGCTGCAGCTCTCACCTTACTCGACACTGTAGAATGTGTAATGGAAAATTTAGC
AAA

ORF Protein

Cloned ORF protein sequence for pF1KB9609 Download

>KIBB9609  241 aa
MTHLTQHQTTHTREKFHECSECGKAFSRVSALIDHQRIHSGEKPYECKECGRAFTQSAQL
IRHQKTHSGEKPYECSKCKKSFVHLSSLIEHWRIHTGEKPYQCKDCKKTFCRVMQFTLHR
RIHTGEKPYECKECGKSFSAHSSLVTHKRTHSGEKPYKCKECGKAFSAHSSLVTHKRTHS
GEKPYTCHACGKAFNTSSTLCQHNRIHTGEKPFQCSQCGKSFSCSSHLTRHCRMCNGKFS
K

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9609 Download

>pF1KB9609  3836 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACTCATCTC
ACACAGCATCAGACTACACATACGAGAGAAAAGTTCCATGAATGCAGTGAATGTGGAAAG
GCCTTCAGCCGTGTCTCAGCTCTTATAGATCACCAGCGAATTCATAGTGGAGAAAAGCCG
TATGAATGTAAGGAGTGTGGAAGAGCCTTCACTCAAAGTGCCCAGCTCATTAGACATCAG
AAAACTCATTCTGGAGAAAAACCCTATGAGTGTAGTAAGTGTAAGAAATCTTTTGTGCAC
CTGTCTTCCCTGATTGAACATTGGAGAATTCACACTGGAGAAAAACCATATCAATGTAAG
GACTGCAAAAAGACCTTTTGTCGTGTGATGCAGTTCACTCTGCACAGGAGAATTCATACT
GGTGAAAAACCCTATGAATGCAAGGAATGTGGAAAGTCCTTCAGCGCCCATTCTTCTCTT
GTTACTCATAAGAGAACACACAGTGGAGAAAAACCGTATAAATGCAAGGAATGTGGAAAA
GCCTTCAGTGCGCACTCTTCCCTTGTTACTCATAAGAGAACACACAGTGGAGAGAAACCC
TATACATGCCATGCCTGTGGGAAGGCCTTTAATACTTCCTCCACACTTTGTCAACATAAT
AGAATTCATACTGGTGAAAAACCCTTTCAGTGCAGTCAATGCGGGAAGTCCTTTAGCTGC
AGCTCTCACCTTACTCGACACTGTAGAATGTGTAATGGAAAATTTAGCAAAGTTTAAACG
AATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCC
GGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACT
AGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAAC
TATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCC
ACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTA
GCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTT
CCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCA
GCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTG
CCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCG
TTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGG
CTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGG
CTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAAT
GAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCA
GCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCG
GGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGAT
GCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAA
CATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTG
GACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATG
CCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTG
GAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTAT
CAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGAC
CGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGC
CTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGC
CCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAA
CGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGC
GTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTC
AAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAG
CTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCT
CCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTA
GGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGC
CTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGC
AGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTT
GAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCT
GAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGC
TGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCA
AGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTA
AGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGG
AAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGC
AGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCA
TACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTT
TACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGAT
TATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGG
CCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGA
ACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACC
TGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCC
CCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACT
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGC
CGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGC
CATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGT
TTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT