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SpecieshumanProduct IDFXC03285Cloning SiteSgfI-PmeIGeneKIBB9762SymbolTAF5
Alias : TAF(II)100, TAF2D, TAFII-100, TAFII100DescriptionTAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDaOriginal Clone IDcp00345
Length: 2400 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 800 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS7547.1 4.8e-167 100.0 TAF5 CCDS1581.1 8.2e-32 37.5 TAF5L
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR020472 558 572 PR00320 G-protein beta WD-40 repeat IPR020472 642 656 PR00320 G-protein beta WD-40 repeat IPR020472 726 740 PR00320 G-protein beta WD-40 repeat HMMPfam IPR007582 201 337 PF04494 TFIID subunit IPR019781 472 498 PF00400 WD40 repeat IPR019781 536 571 PF00400 WD40 repeat IPR019781 576 612 PF00400 WD40 repeat IPR019781 618 655 PF00400 WD40 repeat IPR019781 659 697 PF00400 WD40 repeat IPR019781 704 739 PF00400 WD40 repeat HMMSmart IPR001680 459 498 SM00320 WD40 repeat IPR001680 532 571 SM00320 WD40 repeat IPR001680 574 613 SM00320 WD40 repeat IPR001680 616 655 SM00320 WD40 repeat IPR001680 658 697 SM00320 WD40 repeat IPR001680 700 739 SM00320 WD40 repeat ProfileScan IPR006594 92 124 PS50896 LisH dimerisation motif IPR019782 466 507 PS50082 WD40 repeat 2 IPR017986 466 507 PS50294 WD40-repeat-containing domain IPR019782 539 574 PS50082 WD40 repeat 2 IPR017986 539 748 PS50294 WD40-repeat-containing domain IPR019782 581 612 PS50082 WD40 repeat 2 IPR019782 623 664 PS50082 WD40 repeat 2 IPR019782 665 698 PS50082 WD40 repeat 2 IPR019782 707 739 PS50082 WD40 repeat 2
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_008882 800 601787 100.0 100.0 NP_620640 745 601787 93.1 100.0 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB9762 Download>KIBB9762 2400 bp ATGGCGGCGCTGGCGGAGGAGCAGACGGAGGTGGCGGTCAAGCTAGAGCCTGAGGGACCG CCAACGCTGCTACCTCCGCAGGCGGGGGACGGCGCAGGCGAGGGTAGCGGCGGCACTACC AACAACGGCCCCAACGGCGGCGGCGGGAACGTTGCGGCGTCGTCGTCCACTGGCGGGGAT GGCGGGACCCCCAAGCCCACGGTGGCTGTCTCCGCCGCTGCCCCGGCGGGGGCGGCCCCG GTGCCCGCCGCTGCTCCGGACGCCGGCGCTCCGCATGACCGACAGACTCTACTGGCCGTG CTGCAGTTCCTACGGCAGAGCAAACTCCGCGAGGCCGAAGAGGCGCTGCGCCGTGAGGCC GGGCTGCTGGAGGAGGCAGTGGCGGGCTCCGGAGCCCCGGGAGAGGTGGACAGCGCCGGC GCTGAGGTGACCAGCGCGCTTCTCAGCCGGGTGACCGCCTCGGCCCCTGGCCCTGCGGCC CCCGACCCTCCGGGCACTGGCGCTTCGGGGGCCACGGTCGTCTCAGGTTCAGCCTCAGGT CCTGCGGCTCCGGGTAAAGTTGGAAGCGTTGCTGTGGAAGACCAGCCAGATGTCAGTGCC GTGTTGTCAGCCTACAACCAACAAGGAGATCCCACAATGTATGAAGAATACTATAGTGGA CTGAAACACTTCATTGAATGTTCCCTGGACTGCCATCGGGCAGAGTTGTCCCAACTTTTT TATCCTCTGTTTGTGCACATGTACTTGGAGCTAGTCTACAATCAACATGAGAATGAAGCA AAGTCATTCTTTGAGAAGTTCCATGGAGATCAGGAATGTTATTACCAGGATGACCTACGA GTATTATCTAGTCTTACCAAAAAGGAACACATGAAAGGGAATGAGACCATGTTGGATTTT CGAACAAGTAAATTTGTTCTGCGTATTTCCCGTGACTCGTACCAACTCTTGAAGAGGCAT CTTCAGGAGAAACAGAACAATCAGATATGGAACATAGTTCAGGAGCACCTCTACATTGAC ATCTTTGATGGGATGCCGCGTAGTAAGCAACAGATAGATGCGATGGTGGGAAGTTTGGCA GGAGAGGCTAAACGAGAGGCAAACAAATCAAAGGTATTTTTTGGTTTATTAAAAGAACCA GAAATTGAGGTACCTTTGGATGACGAGGATGAAGAGGGAGAAAATGAAGAAGGAAAACCT AAAAAGAAGAAGCCTAAAAAAGATAGTATTGGATCCAAAAGCAAAAAACAAGATCCCAAT GCTCCACCTCAGAACAGAATCCCTCTTCCTGAGTTGAAAGATTCAGATAAGTTGGATAAG ATAATGAATATGAAAGAAACCACCAAACGAGTGCGCCTTGGGCCGGACTGCTTACCCTCC ATTTGTTTCTATACATTTCTCAATGCTTACCAGGGTCTCACTGCAGTGGATGTCACTGAT GATTCTAGTCTGATTGCTGGAGGTTTTGCAGATTCAACTGTCAGAGTGTGGTCGGTAACA CCCAAAAAGCTTCGTAGTGTCAAACAAGCATCAGATCTTAGTCTTATAGACAAAGAATCA GATGATGTCTTAGAAAGAATCATGGATGAGAAAACAGCAAGTGAGTTGAAGATTTTGTAT GGTCACAGTGGGCCTGTCTACGGAGCCAGCTTCAGTCCGGATAGGAACTATCTGCTTTCC TCTTCAGAGGACGGAACTGTTAGATTGTGGAGCCTTCAAACATTTACTTGTTTGGTGGGA TATAAAGGACACAACTATCCAGTATGGGACACACAATTTTCTCCATATGGATATTATTTT GTGTCAGGGGGCCATGACCGAGTAGCTCGGCTCTGGGCTACAGACCACTATCAGCCTTTA AGAATATTTGCCGGCCATCTTGCTGATGTGAATTGTACCAGATTCCATCCAAATTCTAAT TATGTTGCTACGGGCTCTGCAGACAGAACTGTGCGGCTCTGGGACGTCCTGAATGGTAAC TGTGTAAGGATCTTCACTGGACACAAGGGACCAATTCATTCCTTGACATTTTCTCCCAAT GGGAGATTCCTGGCTACAGGAGCAACAGATGGCAGAGTGCTTCTTTGGGATATTGGACAT GGTTTGATGGTTGGAGAATTAAAAGGCCACACTGATACAGTCTGTTCACTTAGGTTTAGT AGAGATGGTGAAATTTTGGCATCAGGTTCAATGGATAATACAGTTCGATTATGGGATGCT ATCAAAGCCTTTGAAGATTTAGAGACCGATGACTTTACTACAGCCACTGGGCATATAAAT TTACCTGAGAATTCACAGGAGTTATTGTTGGGAACATATATGACCAAATCAACACCAGTT GTACACCTTCATTTTACTCGAAGAAACCTGGTTCTAGCTGCAGGAGCTTATAGTCCACAA
Cloned ORF protein sequence for pF1KB9762 Download>KIBB9762 800 aa MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNGPNGGGGNVAASSSTGGD GGTPKPTVAVSAAAPAGAAPVPAAAPDAGAPHDRQTLLAVLQFLRQSKLREAEEALRREA GLLEEAVAGSGAPGEVDSAGAEVTSALLSRVTASAPGPAAPDPPGTGASGATVVSGSASG PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV VHLHFTRRNLVLAAGAYSPQ
Nucleotide Sequence (with vector) for pF1KB9762 Download>pF1KB9762 5513 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCGCTG GCGGAGGAGCAGACGGAGGTGGCGGTCAAGCTAGAGCCTGAGGGACCGCCAACGCTGCTA CCTCCGCAGGCGGGGGACGGCGCAGGCGAGGGTAGCGGCGGCACTACCAACAACGGCCCC AACGGCGGCGGCGGGAACGTTGCGGCGTCGTCGTCCACTGGCGGGGATGGCGGGACCCCC AAGCCCACGGTGGCTGTCTCCGCCGCTGCCCCGGCGGGGGCGGCCCCGGTGCCCGCCGCT GCTCCGGACGCCGGCGCTCCGCATGACCGACAGACTCTACTGGCCGTGCTGCAGTTCCTA CGGCAGAGCAAACTCCGCGAGGCCGAAGAGGCGCTGCGCCGTGAGGCCGGGCTGCTGGAG GAGGCAGTGGCGGGCTCCGGAGCCCCGGGAGAGGTGGACAGCGCCGGCGCTGAGGTGACC AGCGCGCTTCTCAGCCGGGTGACCGCCTCGGCCCCTGGCCCTGCGGCCCCCGACCCTCCG GGCACTGGCGCTTCGGGGGCCACGGTCGTCTCAGGTTCAGCCTCAGGTCCTGCGGCTCCG GGTAAAGTTGGAAGCGTTGCTGTGGAAGACCAGCCAGATGTCAGTGCCGTGTTGTCAGCC TACAACCAACAAGGAGATCCCACAATGTATGAAGAATACTATAGTGGACTGAAACACTTC ATTGAATGTTCCCTGGACTGCCATCGGGCAGAGTTGTCCCAACTTTTTTATCCTCTGTTT GTGCACATGTACTTGGAGCTAGTCTACAATCAACATGAGAATGAAGCAAAGTCATTCTTT GAGAAGTTCCATGGAGATCAGGAATGTTATTACCAGGATGACCTACGAGTATTATCTAGT CTTACCAAAAAGGAACACATGAAAGGGAATGAGACCATGTTGGATTTTCGAACAAGTAAA TTTGTTCTGCGTATTTCCCGTGACTCGTACCAACTCTTGAAGAGGCATCTTCAGGAGAAA CAGAACAATCAGATATGGAACATAGTTCAGGAGCACCTCTACATTGACATCTTTGATGGG ATGCCGCGTAGTAAGCAACAGATAGATGCGATGGTGGGAAGTTTGGCAGGAGAGGCTAAA CGAGAGGCAAACAAATCAAAGGTATTTTTTGGTTTATTAAAAGAACCAGAAATTGAGGTA CCTTTGGATGACGAGGATGAAGAGGGAGAAAATGAAGAAGGAAAACCTAAAAAGAAGAAG CCTAAAAAAGATAGTATTGGATCCAAAAGCAAAAAACAAGATCCCAATGCTCCACCTCAG AACAGAATCCCTCTTCCTGAGTTGAAAGATTCAGATAAGTTGGATAAGATAATGAATATG AAAGAAACCACCAAACGAGTGCGCCTTGGGCCGGACTGCTTACCCTCCATTTGTTTCTAT ACATTTCTCAATGCTTACCAGGGTCTCACTGCAGTGGATGTCACTGATGATTCTAGTCTG ATTGCTGGAGGTTTTGCAGATTCAACTGTCAGAGTGTGGTCGGTAACACCCAAAAAGCTT CGTAGTGTCAAACAAGCATCAGATCTTAGTCTTATAGACAAAGAATCAGATGATGTCTTA GAAAGAATCATGGATGAGAAAACAGCAAGTGAGTTGAAGATTTTGTATGGTCACAGTGGG CCTGTCTACGGAGCCAGCTTCAGTCCGGATAGGAACTATCTGCTTTCCTCTTCAGAGGAC GGAACTGTTAGATTGTGGAGCCTTCAAACATTTACTTGTTTGGTGGGATATAAAGGACAC AACTATCCAGTATGGGACACACAATTTTCTCCATATGGATATTATTTTGTGTCAGGGGGC CATGACCGAGTAGCTCGGCTCTGGGCTACAGACCACTATCAGCCTTTAAGAATATTTGCC GGCCATCTTGCTGATGTGAATTGTACCAGATTCCATCCAAATTCTAATTATGTTGCTACG GGCTCTGCAGACAGAACTGTGCGGCTCTGGGACGTCCTGAATGGTAACTGTGTAAGGATC TTCACTGGACACAAGGGACCAATTCATTCCTTGACATTTTCTCCCAATGGGAGATTCCTG GCTACAGGAGCAACAGATGGCAGAGTGCTTCTTTGGGATATTGGACATGGTTTGATGGTT GGAGAATTAAAAGGCCACACTGATACAGTCTGTTCACTTAGGTTTAGTAGAGATGGTGAA ATTTTGGCATCAGGTTCAATGGATAATACAGTTCGATTATGGGATGCTATCAAAGCCTTT GAAGATTTAGAGACCGATGACTTTACTACAGCCACTGGGCATATAAATTTACCTGAGAAT TCACAGGAGTTATTGTTGGGAACATATATGACCAAATCAACACCAGTTGTACACCTTCAT TTTACTCGAAGAAACCTGGTTCTAGCTGCAGGAGCTTATAGTCCACAAGTTTAAACGAAT TCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGC TGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGC ATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTAT ATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACT GCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCT GACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCT TTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCT GGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCG CCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTT CGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTA TTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTG TCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAA CTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCT GTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGG CAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCA ATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACAT CGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGAC GAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCG GATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAA AATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAG GACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGC TTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTT CTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCA ACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGC AGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTT GCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAG TCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTC CCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCC TTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGT CGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTT ATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGC AGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAA GTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAA GCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGG TAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGA AGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGG GATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAA TACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGC TTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATAC GGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTAC CTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTAT GGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCA CGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACG CAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGA CCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCA TGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGG CCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGG GAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCAT AAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTC TACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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