LRRC1 ORF clone pFN21AB5892

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Halotag ORF Clone pFN21AB5892

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Clone info.

Species

human

Clone Name

pFN21AB5892 Sequence (with vector) Restriction Map

Product ID

FHC03433

Flexi Clone PID

FXC03433

ORF Sequence

DNA sequence (1572 bp)
Protein sequence (524 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527517]

Gene

KIBB5892

Symbol

LRRC1

Alias : LANO, dJ523E19.1

Description

leucine rich repeat containing 1

Original Clone ID

cs00592

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1572 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 524 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4953.2 3.5e-176 99.8 LRRC1 CCDS6411.1 2.4e-106 64.5 SCRIB CCDS6412.1 2.4e-106 64.5 SCRIB CCDS81341.1 1.3e-61 44.3 LRRC7 CCDS645.1 1.4e-61 44.3 LRRC7 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001611 60 80 PF00560 Leucine-rich repeat IPR001611 83 103 PF00560 Leucine-rich repeat IPR001611 107 127 PF00560 Leucine-rich repeat IPR001611 175 194 PF00560 Leucine-rich repeat IPR001611 198 219 PF00560 Leucine-rich repeat HMMSmart NULL 35 54 SM00364 NULL IPR003591 36 57 SM00369 Leucine-rich repeat IPR003591 58 80 SM00369 Leucine-rich repeat NULL 58 77 SM00364 NULL IPR003591 81 104 SM00369 Leucine-rich repeat NULL 83 100 SM00364 NULL NULL 104 123 SM00364 NULL IPR003591 127 149 SM00369 Leucine-rich repeat NULL 127 146 SM00364 NULL IPR003591 150 172 SM00369 Leucine-rich repeat NULL 150 169 SM00364 NULL IPR003591 173 195 SM00369 Leucine-rich repeat NULL 173 192 SM00364 NULL IPR003591 196 218 SM00369 Leucine-rich repeat NULL 196 215 SM00364 NULL IPR003591 219 241 SM00369 Leucine-rich repeat NULL 219 238 SM00364 NULL IPR003591 242 264 SM00369 Leucine-rich repeat NULL 242 261 SM00364 NULL IPR003591 265 288 SM00369 Leucine-rich repeat NULL 265 284 SM00364 NULL NULL 288 307 SM00364 NULL IPR003591 311 334 SM00369 Leucine-rich repeat NULL 311 330 SM00364 NULL IPR003591 335 357 SM00369 Leucine-rich repeat NULL 336 353 SM00364 NULL IPR003591 358 380 SM00369 Leucine-rich repeat ProfileScan IPR001611 37 58 PS51450 Leucine-rich repeat IPR001611 60 81 PS51450 Leucine-rich repeat IPR001611 83 104 PS51450 Leucine-rich repeat IPR001611 106 127 PS51450 Leucine-rich repeat IPR001611 129 150 PS51450 Leucine-rich repeat IPR001611 152 173 PS51450 Leucine-rich repeat IPR001611 175 196 PS51450 Leucine-rich repeat IPR001611 198 219 PS51450 Leucine-rich repeat IPR001611 221 242 PS51450 Leucine-rich repeat IPR001611 244 265 PS51450 Leucine-rich repeat IPR001611 267 288 PS51450 Leucine-rich repeat IPR001611 290 311 PS51450 Leucine-rich repeat IPR001611 313 334 PS51450 Leucine-rich repeat IPR001611 336 357 PS51450 Leucine-rich repeat IPR001611 359 381 PS51450 Leucine-rich repeat IPR001611 382 402 PS51450 Leucine-rich repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011513028 524 608195 99.8 100.0 NP_060684 524 608195 99.8 100.0 XP_011513029 465 608195 97.1 85.3 NP_056171 1630 607733 64.5 95.2 NP_874365 1655 607733 64.5 95.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB5892 Download

>KIBB5892  1572 bp
ATGTTCCACTGCATCCCCCTGTGGCGGTGCAACCGTCATGTGGAGAGCATCGACAAGCGC
CACTGCTCGCTGGTCTACGTCCCCGAGGAGATCTACCGCTATGCCCGGAGCCTGGAGGAG
CTGCTGCTGGACGCCAACCAGCTCCGCGAGCTGCCCGAGCAATTTTTCCAGCTAGTCAAA
TTACGAAAGCTTGGACTTAGTGATAATGAAATTCAGCGGCTCCCTCCAGAAATAGCAAAC
TTCATGCAGCTGGTGGAACTAGATGTGTCTCGAAATGAGATTCCTGAAATTCCAGAAAGC
ATTTCATTCTGTAAAGCACTGCAGGTAGCTGACTTCAGCGGAAACCCACTGACTAGGTTG
CCAGAAAGCTTTCCTGAATTACAGAATTTAACATGTCTTTCTGTAAATGACATCTCACTA
CAGTCTCTACCTGAAAATATTGGCAATCTTTATAACCTGGCTTCACTGGAACTGAGAGAG
AATCTTCTTACATATCTTCCTGACTCTCTTACCCAGCTGCGAAGACTAGAAGAACTTGAT
TTAGGAAACAATGAAATATATAATTTGCCAGAATCAGTTGGAGCCCTCTTACATCTAAAA
GATCTCTGGTTGGATGGAAATCAACTGTCAGAATTACCTCAGGAAATAGGAAATCTGAAG
AACCTGCTGTGTTTAGATGTCTCTGAAAACAGGTTGGAAAGACTTCCTGAAGAAATCAGT
GGCCTGACTTCATTAACGGATTTAGTCATTTCCCAGAACTTATTAGAAACGATTCCGGAT
GGCATTGGAAAACTAAAGAAACTGTCAATCTTGAAGGTGGATCAGAATAGACTCACACAG
TTGCCTGAAGCAGTTGGGGAATGTGAAAGTCTCACTGAGTTAGTTCTTACAGAAAATCAG
CTCCTGACCCTGCCTAAAAGCATTGGAAAACTAAAGAAGTTGAGCAACTTGAATGCAGAC
AGAAATAAATTAGTGTCCTTACCAAAAGAGATCGGCGGGTGCTGCAGCCTCACTGTGTTC
TGTGTACGTGACAACAGACTAACTCGGATACCTGCAGAGGTGTCACAGGCAACAGAACTT
CATGTCCTGGATGTGGCAGGGAACAGGTTGCTGCATCTACCTTTATCCCTGACTGCCTTG
AAGTTGAAGGCTCTGTGGCTATCTGACAACCAGTCCCAGCCCCTGCTTACATTCCAGACA
GACACAGACTACACCACAGGAGAGAAGATTTTAACCTGTGTCTTACTTCCTCAGCTGCCT
TCTGAACCTACTTGTCAAGAGAATCTGCCTCGCTGTGGTGCACTGGAGAACTTGGTAAAT
GATGTCTCTGATGAAGCCTGGAACGAGCGTGCTGTCAACAGAGTCAGTGCGATCCGATTT
GTGGAGGATGAGAAAGATGAAGAAGACAATGAGACGAGAACACTTCTAAGGCGAGCCACT
CCACACCCAGGGGAGTTAAAGCACATGAAAAAGACAGTGGAGAATTTACGGAATGACATG
AATGCTGCTAAAGGACTGGACTCAAACAAAAACGAGGTCAATCATGCCATTGACCGAGTG
ACCACTTCTGTG

ORF Protein

Cloned ORF protein sequence for pFN21AB5892 Download

>KIBB5892  524 aa
MFHCIPLWRCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVK
LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRL
PESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELD
LGNNEIYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS
GLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQ
LLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATEL
HVLDVAGNRLLHLPLSLTALKLKALWLSDNQSQPLLTFQTDTDYTTGEKILTCVLLPQLP
SEPTCQENLPRCGALENLVNDVSDEAWNERAVNRVSAIRFVEDEKDEEDNETRTLLRRAT
PHPGELKHMKKTVENLRNDMNAAKGLDSNKNEVNHAIDRVTTSV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB5892 Download

>pFN21AB5892  6277 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTTCCACTGCATCCCCCTGTGGCGGTGCAACCG
TCATGTGGAGAGCATCGACAAGCGCCACTGCTCGCTGGTCTACGTCCCCGAGGAGATCTA
CCGCTATGCCCGGAGCCTGGAGGAGCTGCTGCTGGACGCCAACCAGCTCCGCGAGCTGCC
CGAGCAATTTTTCCAGCTAGTCAAATTACGAAAGCTTGGACTTAGTGATAATGAAATTCA
GCGGCTCCCTCCAGAAATAGCAAACTTCATGCAGCTGGTGGAACTAGATGTGTCTCGAAA
TGAGATTCCTGAAATTCCAGAAAGCATTTCATTCTGTAAAGCACTGCAGGTAGCTGACTT
CAGCGGAAACCCACTGACTAGGTTGCCAGAAAGCTTTCCTGAATTACAGAATTTAACATG
TCTTTCTGTAAATGACATCTCACTACAGTCTCTACCTGAAAATATTGGCAATCTTTATAA
CCTGGCTTCACTGGAACTGAGAGAGAATCTTCTTACATATCTTCCTGACTCTCTTACCCA
GCTGCGAAGACTAGAAGAACTTGATTTAGGAAACAATGAAATATATAATTTGCCAGAATC
AGTTGGAGCCCTCTTACATCTAAAAGATCTCTGGTTGGATGGAAATCAACTGTCAGAATT
ACCTCAGGAAATAGGAAATCTGAAGAACCTGCTGTGTTTAGATGTCTCTGAAAACAGGTT
GGAAAGACTTCCTGAAGAAATCAGTGGCCTGACTTCATTAACGGATTTAGTCATTTCCCA
GAACTTATTAGAAACGATTCCGGATGGCATTGGAAAACTAAAGAAACTGTCAATCTTGAA
GGTGGATCAGAATAGACTCACACAGTTGCCTGAAGCAGTTGGGGAATGTGAAAGTCTCAC
TGAGTTAGTTCTTACAGAAAATCAGCTCCTGACCCTGCCTAAAAGCATTGGAAAACTAAA
GAAGTTGAGCAACTTGAATGCAGACAGAAATAAATTAGTGTCCTTACCAAAAGAGATCGG
CGGGTGCTGCAGCCTCACTGTGTTCTGTGTACGTGACAACAGACTAACTCGGATACCTGC
AGAGGTGTCACAGGCAACAGAACTTCATGTCCTGGATGTGGCAGGGAACAGGTTGCTGCA
TCTACCTTTATCCCTGACTGCCTTGAAGTTGAAGGCTCTGTGGCTATCTGACAACCAGTC
CCAGCCCCTGCTTACATTCCAGACAGACACAGACTACACCACAGGAGAGAAGATTTTAAC
CTGTGTCTTACTTCCTCAGCTGCCTTCTGAACCTACTTGTCAAGAGAATCTGCCTCGCTG
TGGTGCACTGGAGAACTTGGTAAATGATGTCTCTGATGAAGCCTGGAACGAGCGTGCTGT
CAACAGAGTCAGTGCGATCCGATTTGTGGAGGATGAGAAAGATGAAGAAGACAATGAGAC
GAGAACACTTCTAAGGCGAGCCACTCCACACCCAGGGGAGTTAAAGCACATGAAAAAGAC
AGTGGAGAATTTACGGAATGACATGAATGCTGCTAAAGGACTGGACTCAAACAAAAACGA
GGTCAATCATGCCATTGACCGAGTGACCACTTCTGTGGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT