SGTB ORF clone pFN21AB6403

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Halotag ORF Clone pFN21AB6403

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Clone info.

Species

human

Clone Name

pFN21AB6403 Sequence (with vector) Restriction Map

Product ID

FHC10571

Flexi Clone PID

FXC10571

ORF Sequence

DNA sequence (912 bp)
Protein sequence (304 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB528637]

Gene

KIBB6403

Symbol

SGTB

Alias : SGT2

Description

small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta

Original Clone ID

cs01003

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 912 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 304 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3988.1 8.1e-112 100.0 SGTB CCDS12094.1 9e-62 58.3 SGTA CCDS53783.1 2.3e-12 39.1 RPAP3 CCDS8753.1 2.4e-12 39.1 RPAP3 CCDS8058.1 4.2e-11 32.5 STIP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001440 86 118 PF00515 Tetratricopeptide TPR-1 IPR001440 119 152 PF00515 Tetratricopeptide TPR-1 IPR001440 154 186 PF00515 Tetratricopeptide TPR-1 HMMSmart IPR019734 85 118 SM00028 Tetratricopeptide repeat IPR019734 119 152 SM00028 Tetratricopeptide repeat IPR019734 153 186 SM00028 Tetratricopeptide repeat ProfileScan IPR019734 85 118 PS50005 Tetratricopeptide repeat IPR013026 85 186 PS50293 Tetratricopeptide repeat-containing IPR019734 119 152 PS50005 Tetratricopeptide repeat IPR019734 153 186 PS50005 Tetratricopeptide repeat
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003012 313 603419 58.3 99.7 XP_011526480 313 603419 58.3 99.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB6403 Download

>KIBB6403  912 bp
ATGTCATCTATCAAGCACCTGGTTTATGCAGTTATTCGTTTCTTACGGGAACAAAGTCAG
ATGGACACTTACACCTCGGATGAACAAGAAAGTTTGGAAGTTGCAATTCAGTGCTTGGAG
ACAGTTTTTAAGATCAGCCCAGAAGATACACACCTAGCAGTTTCACAGCCTTTGACAGAA
ATGTTTACCAGTTCCTTCTGTAAGAATGACGTTCTGCCCCTTTCAAACTCAGTGCCTGAA
GATGTGGGAAAAGCTGACCAATTAAAAGATGAAGGCAATAACCACATGAAAGAAGAAAAT
TATGCTGCTGCAGTGGATTGTTACACACAGGCAATAGAATTGGATCCCAATAATGCAGTT
TACTATTGCAACAGGGCTGCTGCTCAGAGCAAATTAGGTCACTACACAGATGCGATAAAG
GATTGTGAAAAAGCAATAGCAATTGATTCAAAGTACAGCAAGGCCTATGGGAGAATGGGG
CTGGCCCTCACTGCCTTGAATAAATTTGAAGAAGCAGTTACAAGTTATCAAAAGGCATTA
GATCTTGACCCTGAAAATGATTCCTATAAGTCAAATCTGAAAATAGCAGAACAGAAGTTA
AGAGAGGTATCCAGTCCTACAGGAACTGGACTGAGCTTTGACATGGCTAGCTTGATAAAT
AATCCAGCCTTCATTAGTATGGCGGCAAGTTTAATGCAGAACCCTCAAGTTCAACAGCTA
ATGTCAGGAATGATGACAAATGCCATTGGGGGACCTGCTGCTGGAGTTGGGGGCCTAACT
GACCTGTCAAGCCTCATCCAAGCGGGACAGCAGTTTGCTCAGCAGATACAGCAACAAAAT
CCTGAACTTATAGAGCAACTGAGAAATCACATCCGGAGCAGATCATTCAGCAGCAGCGCT
GAAGAGCATTCC

ORF Protein

Cloned ORF protein sequence for pFN21AB6403 Download

>KIBB6403  304 aa
MSSIKHLVYAVIRFLREQSQMDTYTSDEQESLEVAIQCLETVFKISPEDTHLAVSQPLTE
MFTSSFCKNDVLPLSNSVPEDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAV
YYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKAL
DLDPENDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFISMAASLMQNPQVQQL
MSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSA
EEHS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB6403 Download

>pFN21AB6403  5617 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCATCTATCAAGCACCTGGTTTATGCAGTTAT
TCGTTTCTTACGGGAACAAAGTCAGATGGACACTTACACCTCGGATGAACAAGAAAGTTT
GGAAGTTGCAATTCAGTGCTTGGAGACAGTTTTTAAGATCAGCCCAGAAGATACACACCT
AGCAGTTTCACAGCCTTTGACAGAAATGTTTACCAGTTCCTTCTGTAAGAATGACGTTCT
GCCCCTTTCAAACTCAGTGCCTGAAGATGTGGGAAAAGCTGACCAATTAAAAGATGAAGG
CAATAACCACATGAAAGAAGAAAATTATGCTGCTGCAGTGGATTGTTACACACAGGCAAT
AGAATTGGATCCCAATAATGCAGTTTACTATTGCAACAGGGCTGCTGCTCAGAGCAAATT
AGGTCACTACACAGATGCGATAAAGGATTGTGAAAAAGCAATAGCAATTGATTCAAAGTA
CAGCAAGGCCTATGGGAGAATGGGGCTGGCCCTCACTGCCTTGAATAAATTTGAAGAAGC
AGTTACAAGTTATCAAAAGGCATTAGATCTTGACCCTGAAAATGATTCCTATAAGTCAAA
TCTGAAAATAGCAGAACAGAAGTTAAGAGAGGTATCCAGTCCTACAGGAACTGGACTGAG
CTTTGACATGGCTAGCTTGATAAATAATCCAGCCTTCATTAGTATGGCGGCAAGTTTAAT
GCAGAACCCTCAAGTTCAACAGCTAATGTCAGGAATGATGACAAATGCCATTGGGGGACC
TGCTGCTGGAGTTGGGGGCCTAACTGACCTGTCAAGCCTCATCCAAGCGGGACAGCAGTT
TGCTCAGCAGATACAGCAACAAAATCCTGAACTTATAGAGCAACTGAGAAATCACATCCG
GAGCAGATCATTCAGCAGCAGCGCTGAAGAGCATTCCGTTTAAACGAATTCGGGCTCGGT
ACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAG
CCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTG
GGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACT
AGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTA
ACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAG
GTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAA
ATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAG
CTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCT
TAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTC
TAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAA
TATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTT
GCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCT
GAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATC
CTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTA
TGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACAC
TATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGC
ATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAAC
TTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGG
GATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGAC
GAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGC
GAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTT
GCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGA
GCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCC
CGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAG
ATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCG
ACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGG
ATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGG
CCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGAC
GCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTG
GAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCT
TTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGG
TGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCT
GCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCAC
TGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGT
TCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTC
TGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCA
CCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGAT
TTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCAC
GTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGT
CCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAA
TGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTA
TTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCA
TTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAG
GGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACT
CCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT